RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 TDRG1Q3Y452 100 aa12.22□□□□□ -0.45
AP3S1-208ENST00000515066 ANXA2RQ3ZCQ2 193 aa12.22□□□□□ -0.45
AP3S1-208ENST00000515066 NAGKQ9UJ70 344 aa12.22□□□□□ -0.45
AP3S1-208ENST00000515066 TENM3Q9P273 2699 aa12.21□□□□□ -0.45
AP3S1-208ENST00000515066 TMSB15BA0A087X1C1 80 aa12.21□□□□□ -0.45
AP3S1-208ENST00000515066 H7BYZ3 331 aa12.21□□□□□ -0.45
AP3S1-208ENST00000515066 FRMD6-AS1P0C7T7 363 aa12.21□□□□□ -0.45
AP3S1-208ENST00000515066 APOC4P55056 127 aa12.21□□□□□ -0.45
AP3S1-208ENST00000515066 CT83Q5H943 113 aa12.21□□□□□ -0.45
AP3S1-208ENST00000515066 TMEM242Q9NWH2 141 aa12.21□□□□□ -0.45
AP3S1-208ENST00000515066 TMEM189A5PLL7 270 aa12.2□□□□□ -0.46
AP3S1-208ENST00000515066 PPP1R2P9O14990 202 aa12.2□□□□□ -0.46
AP3S1-208ENST00000515066 GZMBP10144 247 aa12.2□□□□□ -0.46
AP3S1-208ENST00000515066 CTDSP1Q9GZU7 261 aa12.2□□□□□ -0.46
AP3S1-208ENST00000515066 IGHV1OR15-1A0A075B7D0 117 aa12.19□□□□□ -0.46
AP3S1-208ENST00000515066 SCO1O75880 301 aa12.19□□□□□ -0.46
AP3S1-208ENST00000515066 PRM2P04554 102 aa12.19□□□□□ -0.46
AP3S1-208ENST00000515066 ZNF705AQ6ZN79 300 aaPredicted RBP12.19□□□□□ -0.46
AP3S1-208ENST00000515066 TP53TG3Q9ULZ0 132 aa12.19□□□□□ -0.46
AP3S1-208ENST00000515066 FAM159AQ6UWV7 190 aa12.19□□□□□ -0.46
AP3S1-208ENST00000515066 TMEM256Q8N2U0 113 aa12.19□□□□□ -0.46
AP3S1-208ENST00000515066 GTSF1Q8WW33 167 aa12.19□□□□□ -0.46
AP3S1-208ENST00000515066 PYGO2Q9BRQ0 406 aa12.19□□□□□ -0.46
AP3S1-208ENST00000515066 GNRH2O43555 120 aa12.18□□□□□ -0.46
AP3S1-208ENST00000515066 TYMSP04818 313 aa12.18□□□□□ -0.46
AP3S1-208ENST00000515066 DEFB135Q30KP9 77 aa12.18□□□□□ -0.46
AP3S1-208ENST00000515066 TSKUQ8WUA8 353 aa12.18□□□□□ -0.46
AP3S1-208ENST00000515066 LINC00467Q9BRT7 94 aa12.18□□□□□ -0.46
AP3S1-208ENST00000515066 MEGF8Q7Z7M0 2845 aa12.18□□□□□ -0.46
AP3S1-208ENST00000515066 IGHV3OR16-12A0A075B7B8 117 aa12.17□□□□□ -0.46
AP3S1-208ENST00000515066 SMIM27A0A1W2PRY6 76 aa12.17□□□□□ -0.46
AP3S1-208ENST00000515066 GRIFINA4D1Z8 144 aa12.17□□□□□ -0.46
AP3S1-208ENST00000515066 A8MWL6 223 aa12.17□□□□□ -0.46
AP3S1-208ENST00000515066 KCNS1Q96KK3 526 aa12.17□□□□□ -0.46
AP3S1-208ENST00000515066 LINC01587Q99440 93 aa12.17□□□□□ -0.46
AP3S1-208ENST00000515066 NEU1Q99519 415 aa12.17□□□□□ -0.46
AP3S1-208ENST00000515066 IL36BQ9NZH7 164 aa12.17□□□□□ -0.46
AP3S1-208ENST00000515066 UBE2CO00762 179 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 CXCL1P09341 107 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 IGLC6P0CF74 106 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 TMEM88Q6PEY1 159 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 CBLN2Q8IUK8 224 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 TMEM208Q9BTX3 173 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 HIGD1CA8MV81 97 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 RNASE3P12724 160 aaKnown RBP12.16□□□□□ -0.46
AP3S1-208ENST00000515066 HTN1P15515 57 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 TCL1AP56279 114 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 RPS20P60866 119 aaKnown RBP12.16□□□□□ -0.46
AP3S1-208ENST00000515066 DNLZQ5SXM8 178 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 Q6ZWC4 215 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 GFRA4Q9GZZ7 299 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 GOLT1BQ9Y3E0 138 aa12.16□□□□□ -0.46
AP3S1-208ENST00000515066 XKRY2A2RUG3 117 aa12.15□□□□□ -0.46
AP3S1-208ENST00000515066 FAM231BA6NCW3 169 aa12.15□□□□□ -0.46
AP3S1-208ENST00000515066 AZU1P20160 251 aa12.15□□□□□ -0.46
AP3S1-208ENST00000515066 FOXA3P55318 350 aaPredicted RBP12.15□□□□□ -0.46
AP3S1-208ENST00000515066 MDFICQ9P1T7 246 aa12.15□□□□□ -0.46
AP3S1-208ENST00000515066 PRKDCP78527 4128 aaKnown RBP12.15□□□□□ -0.46
AP3S1-208ENST00000515066 IGHV3-16A0A0C4DH30 117 aa12.14□□□□□ -0.47
AP3S1-208ENST00000515066 FAM3BP58499 235 aaPredicted RBP12.14□□□□□ -0.47
AP3S1-208ENST00000515066 IMMP2LQ96T52 175 aa12.14□□□□□ -0.47
AP3S1-208ENST00000515066 URGCP-MRPS24S4R325 110 aa12.14□□□□□ -0.47
AP3S1-208ENST00000515066 X6R8D5 127 aa12.14□□□□□ -0.47
AP3S1-208ENST00000515066 CXorf65A6NEN9 183 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 CBY3A6NI87 242 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 H3BVH4 76 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 C11orf72Q8NBR9 251 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 NUP35Q8NFH5 326 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 RNASE8Q8TDE3 154 aaKnown RBP12.13□□□□□ -0.47
AP3S1-208ENST00000515066 RNF183Q96D59 192 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 YPEL4Q96NS1 127 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 SSBP4Q9BWG4 385 aaPredicted RBP12.13□□□□□ -0.47
AP3S1-208ENST00000515066 NACAE9PAV3 2078 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 CTRLP40313 264 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 ASIPP42127 132 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 FER1L6-AS1Q8NA97 138 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 RCHY1Q96PM5 261 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 SCRT2Q9NQ03 307 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 NAT8BQ9UHF3 227 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 DNAH9Q9NYC9 4486 aa12.13□□□□□ -0.47
AP3S1-208ENST00000515066 COL7A1Q02388 2944 aa12.12□□□□□ -0.47
AP3S1-208ENST00000515066 HUWE1Q7Z6Z7 4374 aaKnown RBP12.12□□□□□ -0.47
AP3S1-208ENST00000515066 TRGV11A0A075B6L2 103 aa12.12□□□□□ -0.47
AP3S1-208ENST00000515066 SNAI2O43623 268 aa12.12□□□□□ -0.47
AP3S1-208ENST00000515066 OR5AL1P0C617 328 aa12.12□□□□□ -0.47
AP3S1-208ENST00000515066 ARMS2P0C7Q2 107 aa12.12□□□□□ -0.47
AP3S1-208ENST00000515066 SBSPONQ8IVN8 264 aa12.12□□□□□ -0.47
AP3S1-208ENST00000515066 C9orf85Q96MD7 179 aa12.12□□□□□ -0.47
AP3S1-208ENST00000515066 SMCO4Q9NRQ5 59 aa12.12□□□□□ -0.47
AP3S1-208ENST00000515066 A0A1W2PPQ1 181 aa12.11□□□□□ -0.47
AP3S1-208ENST00000515066 PLAC8L1A1L4L8 177 aa12.11□□□□□ -0.47
AP3S1-208ENST00000515066 SPRY2O43597 315 aa12.11□□□□□ -0.47
AP3S1-208ENST00000515066 ELOBQ15370 118 aa12.11□□□□□ -0.47
AP3S1-208ENST00000515066 DEFB121Q5J5C9 76 aa12.11□□□□□ -0.47
AP3S1-208ENST00000515066 LYZL1Q6UWQ5 148 aa12.11□□□□□ -0.47
AP3S1-208ENST00000515066 TMEM263Q8WUH6 116 aaKnown RBP12.11□□□□□ -0.47
AP3S1-208ENST00000515066 PGLYRP4Q96LB8 373 aa12.11□□□□□ -0.47
AP3S1-208ENST00000515066 TPPP3Q9BW30 176 aa12.11□□□□□ -0.47
AP3S1-208ENST00000515066 MED14OSP0DP75 135 aa12.1□□□□□ -0.47
AP3S1-208ENST00000515066 S100A4P26447 101 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms