RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TMEM191AQ9H0A3 160 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 HIVEP2P31629 2446 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 TMSB15BA0A087X1C1 80 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 A0A1B0GUS0 222 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 CCL24O00175 119 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 NUPR1O60356 82 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 SERF1AO75920 110 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 ZNF705DP0CH99 300 aaPredicted RBP6.25□□□□□ -1.41
RNF4-220ENST00000513578 ZNF705BP0CI00 300 aaPredicted RBP6.25□□□□□ -1.41
RNF4-220ENST00000513578 JOSD1Q15040 202 aaPredicted RBP6.25□□□□□ -1.41
RNF4-220ENST00000513578 DEFB114Q30KQ6 69 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 PDZD11Q5EBL8 140 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 KHDC1LQ5JSQ8 128 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 FAM104BQ5XKR9 115 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 EBLN2Q6P2I7 272 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 CLUHP3Q96NS8 147 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 SPAG8Q99932 426 aaPredicted RBP6.25□□□□□ -1.41
RNF4-220ENST00000513578 RNF114Q9Y508 228 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 U3KQK5 164 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 JMJD1CQ15652 2540 aa6.25□□□□□ -1.41
RNF4-220ENST00000513578 IGKV3-7A0A075B6H7 116 aa6.24□□□□□ -1.41
RNF4-220ENST00000513578 F6UB75 175 aa6.24□□□□□ -1.41
RNF4-220ENST00000513578 TCF21O43680 179 aa6.24□□□□□ -1.41
RNF4-220ENST00000513578 ZNF688P0C7X2 276 aa6.24□□□□□ -1.41
RNF4-220ENST00000513578 NTF3P20783 257 aa6.24□□□□□ -1.41
RNF4-220ENST00000513578 TSPOP30536 169 aa6.24□□□□□ -1.41
RNF4-220ENST00000513578 TDRG1Q3Y452 100 aa6.24□□□□□ -1.41
RNF4-220ENST00000513578 PYY3Q5JQD4 70 aa6.24□□□□□ -1.41
RNF4-220ENST00000513578 PSMG4Q5JS54 123 aa6.24□□□□□ -1.41
RNF4-220ENST00000513578 WFDC3Q8IUB2 231 aa6.24□□□□□ -1.41
RNF4-220ENST00000513578 CHCHD1Q96BP2 118 aaKnown RBP6.24□□□□□ -1.41
RNF4-220ENST00000513578 KCNS1Q96KK3 526 aa6.24□□□□□ -1.41
RNF4-220ENST00000513578 CITED2Q99967 270 aaPredicted RBP6.24□□□□□ -1.41
RNF4-220ENST00000513578 SCRT2Q9NQ03 307 aa6.24□□□□□ -1.41
RNF4-220ENST00000513578 C7orf71A4D174 169 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 OR4C46A6NHA9 309 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 ADARB2-AS1A8MUL3 147 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 CRLF1O75462 422 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 PPBPP02775 128 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 PMCHP20382 165 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 CMC4P56277 68 aaPredicted RBP6.23□□□□□ -1.41
RNF4-220ENST00000513578 DEFB1P60022 68 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 TWIST1Q15672 202 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 AMTNQ6UX39 209 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 TMEM61Q8N0U2 210 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 OR2K2Q8NGT1 345 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 DYNLRB2Q8TF09 96 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 LAMTOR2Q9Y2Q5 125 aa6.23□□□□□ -1.41
RNF4-220ENST00000513578 ZNF324O75467 553 aaPredicted RBP6.22□□□□□ -1.41
RNF4-220ENST00000513578 NXPH4O95158 308 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 HLA-DRB4P13762 266 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 RAB4AP20338 218 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 RNASE4P34096 147 aaKnown RBP6.22□□□□□ -1.41
RNF4-220ENST00000513578 ASIPP42127 132 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 CDKN1BP46527 198 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 TFPI2P48307 235 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 S100A12P80511 92 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 ANXA2RQ3ZCQ2 193 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 NIT1Q86X76 327 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 NDUFA11Q86Y39 141 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 URB1-AS1Q96HZ7 61 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 RCHY1Q96PM5 261 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 DUX3Q96PT4 197 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 TPPP3Q9BW30 176 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 ZNF256Q9Y2P7 627 aaPredicted RBP6.22□□□□□ -1.41
RNF4-220ENST00000513578 HLA-DRB4X5D2U9 266 aa6.22□□□□□ -1.41
RNF4-220ENST00000513578 AGRNO00468 2067 aa6.21□□□□□ -1.41
RNF4-220ENST00000513578 PRSS47A8MTI9 375 aa6.21□□□□□ -1.42
RNF4-220ENST00000513578 INAFM1C9JVW0 142 aa6.21□□□□□ -1.42
RNF4-220ENST00000513578 H3BMM0 161 aa6.21□□□□□ -1.42
RNF4-220ENST00000513578 IQCJQ1A5X6 159 aa6.21□□□□□ -1.42
RNF4-220ENST00000513578 MRPL51Q4U2R6 128 aaKnown RBP6.21□□□□□ -1.42
RNF4-220ENST00000513578 ORMDL3Q8N138 153 aa6.21□□□□□ -1.42
RNF4-220ENST00000513578 DEFB125Q8N687 156 aa6.21□□□□□ -1.42
RNF4-220ENST00000513578 SPATA3Q8NHX4 192 aa6.21□□□□□ -1.42
RNF4-220ENST00000513578 RNF185Q96GF1 192 aa6.21□□□□□ -1.42
RNF4-220ENST00000513578 MDFIQ99750 246 aa6.21□□□□□ -1.42
RNF4-220ENST00000513578 FAM110AQ9BQ89 295 aa6.21□□□□□ -1.42
RNF4-220ENST00000513578 C20orf144Q9BQM9 153 aa6.21□□□□□ -1.42
RNF4-220ENST00000513578 MAP6D1Q9H9H5 199 aa6.21□□□□□ -1.42
RNF4-220ENST00000513578 HSBP1O75506 76 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 LINC00614P0C842 121 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 RNASE3P12724 160 aaKnown RBP6.2□□□□□ -1.42
RNF4-220ENST00000513578 DEFB131AP59861 70 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 CD300EQ496F6 205 aaPredicted RBP6.2□□□□□ -1.42
RNF4-220ENST00000513578 FAM159AQ6UWV7 190 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 Q6ZQT7 251 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 SMIM15Q7Z3B0 74 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 AMN1Q8IY45 258 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 OR10AG1Q8NH19 301 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 PRELID3AQ96N28 172 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 LINC00467Q9BRT7 94 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 SAMD10Q9BYL1 202 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 NIT2Q9NQR4 276 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 MSRB1Q9NZV6 116 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 SELENOKQ9Y6D0 94 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 MUC4Q99102 2169 aa6.2□□□□□ -1.42
RNF4-220ENST00000513578 LINC01546A6NGU7 62 aa6.19□□□□□ -1.42
RNF4-220ENST00000513578 D6R8Y8 96 aa6.19□□□□□ -1.42
RNF4-220ENST00000513578 H3BVH4 76 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms