RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 DEFB113Q30KQ7 82 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 COL5A1-AS1Q5SY13 56 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 C9orf153Q5TBE3 101 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 MIC13Q5XKP0 118 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 HCP5Q6MZN7 132 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 C9orf163Q8N9P6 203 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 LINC00304Q8N9R0 145 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 TSKUQ8WUA8 353 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 LINC00526Q96FQ7 95 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 NAA38Q9BRA0 125 aaKnown RBP1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 TXNDC17Q9BRA2 123 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 KRTAP4-1Q9BYQ7 146 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 TTTY12Q9BZ98 90 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 Q9H521 79 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 SNURFQ9Y675 71 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 PHLPP1O60346 1717 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 ADGRB1O14514 1584 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 GLI3P10071 1580 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 NRKQ7Z2Y5 1582 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 RB1CC1Q8TDY2 1594 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 CCDC88CQ9P219 2028 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 PZPP20742 1482 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 ZNF609O15014 1411 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 COL1A2P08123 1366 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 TCRBV3S1A0A5B6 114 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 TMEM30CPA0ZSE6 113 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 SDHAF1A6NFY7 115 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 A6NN06 94 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 M0R129 80 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 CCL16O15467 120 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 GYPBP06028 91 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 SPINK8P0C7L1 97 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 LINC00032P0C843 101 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 DCDP81605 110 aaKnown RBP1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 CATR1Q13166 79 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 FP248Q71RG6 208 aaPredicted RBP1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 FAM19A2Q8N3H0 131 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 TMEM141Q96I45 108 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 LINC00052Q96N35 136 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 MED9Q9NWA0 146 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 TANC2Q9HCD6 1990 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 PLXNA3P51805 1871 aa1.24□□□□□ -2.21
DEPDC1B-204ENST00000509006 USP54Q70EL1 1684 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 NCKAP5O14513 1909 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 MYH1P12882 1939 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 MYH6P13533 1939 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 MYH13Q9UKX3 1938 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 TRBV6-8A0A0A6YYG3 113 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 TRAV17A0A0B4J275 112 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 LOC100130705A0A1B0GUX0 176 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 B4DSR2 109 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 H3BQ15 152 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 SSSCA1O60232 199 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 NUPR1O60356 82 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 IGKV4-1P06312 121 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 PIRTP0C851 137 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 P0C880 135 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 CBLN1P23435 193 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 CNBPP62633 177 aaKnown RBP1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 C10orf55Q5SWW7 151 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 TTC9CQ8N5M4 171 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 Q8TAT8 98 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 PPP1R1CQ8WVI7 109 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 ATG5Q9H1Y0 275 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 TMEM14CQ9P0S9 112 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 V9GYS6 101 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 COL11A1P12107 1806 aaPredicted RBP1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 FOCADQ5VW36 1801 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 FBN1P35555 2871 aaKnown RBP1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 PXDNLA1KZ92 1463 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 SHROOM3Q8TF72 1996 aa1.23□□□□□ -2.21
DEPDC1B-204ENST00000509006 KDM6BO15054 1643 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 ARHGAP32A7KAX9 2087 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 TTC37Q6PGP7 1564 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 SCN3AQ9NY46 2000 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 LAMB2P55268 1798 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 ZFYVE16Q7Z3T8 1539 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 ZFC3H1O60293 1989 aaKnown RBP1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 UBE2L5PA0A1B0GUS4 154 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 SPAARA0A1B0GVQ0 90 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 TRBV6-4A0A1B0GX49 114 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 TMEM262E9PQX1 116 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 CCL25O15444 150 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 S100A10P60903 97 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 UBE2L3P68036 154 aaKnown RBP1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 IQCJQ1A5X6 159 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 MPV17LQ2QL34 196 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 SLC48A1Q6P1K1 146 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 KRTAP26-1Q6PEX3 210 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 COA5Q86WW8 74 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 PATE1Q8WXA2 126 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 DMAC1Q96GE9 116 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 CECR2Q9BXF3 1484 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 GPR179Q6PRD1 2367 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 KIAA2026Q5HYC2 2103 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 CUL7Q14999 1698 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 WDR97A6NE52 1622 aa1.22□□□□□ -2.21
DEPDC1B-204ENST00000509006 STRCQ7RTU9 1775 aa1.21□□□□□ -2.22
DEPDC1B-204ENST00000509006 MGAMO43451 1857 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms