RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 SORL1Q92673 2214 aa11.39□□□□□ -0.59
ATP2C1-214ENST00000508532 C2CD3Q4AC94 2353 aa11.39□□□□□ -0.59
ATP2C1-214ENST00000508532 CSPG4Q6UVK1 2322 aa11.39□□□□□ -0.59
ATP2C1-214ENST00000508532 PAX8Q06710 450 aa11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 ATP6V0E1O15342 81 aa11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 CD7P09564 240 aa11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 C8orf86Q6ZUL3 223 aa11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 SPAG8Q99932 426 aaPredicted RBP11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 ATRXP46100 2492 aa11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 IGLV11-55A0A075B6I3 123 aa11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 TEX29Q8N6K0 151 aa11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 MAPKAPK5-AS1Q8N8E1 139 aa11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 KLHL30-AS1Q8NEE0 82 aa11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 A0A087WWL8 130 aa11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 SHISA9B4DS77 424 aa11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 FANCD2OSQ96PS1 177 aa11.38□□□□□ -0.59
ATP2C1-214ENST00000508532 RPL13AP40429 203 aaKnown RBP11.37□□□□□ -0.59
ATP2C1-214ENST00000508532 PTPRBP23467 1997 aa11.37□□□□□ -0.59
ATP2C1-214ENST00000508532 PPP1R17O96001 155 aa11.37□□□□□ -0.59
ATP2C1-214ENST00000508532 TAL2Q16559 108 aa11.37□□□□□ -0.59
ATP2C1-214ENST00000508532 AGRNO00468 2067 aa11.36□□□□□ -0.59
ATP2C1-214ENST00000508532 RPL39LQ96EH5 51 aaKnown RBP11.36□□□□□ -0.59
ATP2C1-214ENST00000508532 IGFL3Q6UXB1 125 aa11.36□□□□□ -0.59
ATP2C1-214ENST00000508532 PRSS29PA6NIE9 313 aa11.36□□□□□ -0.59
ATP2C1-214ENST00000508532 C20orf78Q9BR46 151 aa11.36□□□□□ -0.59
ATP2C1-214ENST00000508532 CRYGBP07316 175 aa11.36□□□□□ -0.59
ATP2C1-214ENST00000508532 TP53TG1Q9Y2A0 90 aa11.36□□□□□ -0.59
ATP2C1-214ENST00000508532 C9JAW5 83 aa11.35□□□□□ -0.59
ATP2C1-214ENST00000508532 DGAT2L7PQ6IED9 249 aa11.35□□□□□ -0.59
ATP2C1-214ENST00000508532 PTH2Q96A98 100 aa11.35□□□□□ -0.59
ATP2C1-214ENST00000508532 IGLC6P0CF74 106 aa11.35□□□□□ -0.59
ATP2C1-214ENST00000508532 PAPPA-AS1Q5QFB9 102 aa11.35□□□□□ -0.59
ATP2C1-214ENST00000508532 C1orf122Q6ZSJ8 110 aa11.35□□□□□ -0.59
ATP2C1-214ENST00000508532 MRAP2Q96G30 205 aa11.35□□□□□ -0.59
ATP2C1-214ENST00000508532 PCSK5Q92824 1860 aa11.35□□□□□ -0.59
ATP2C1-214ENST00000508532 ID1P41134 155 aa11.34□□□□□ -0.59
ATP2C1-214ENST00000508532 COX6CP09669 75 aa11.34□□□□□ -0.59
ATP2C1-214ENST00000508532 KHDC1LQ5JSQ8 128 aa11.34□□□□□ -0.59
ATP2C1-214ENST00000508532 DEFB1P60022 68 aa11.34□□□□□ -0.59
ATP2C1-214ENST00000508532 U3KQK5 164 aa11.34□□□□□ -0.59
ATP2C1-214ENST00000508532 SPANXB1Q9NS25 103 aaPredicted RBP11.34□□□□□ -0.59
ATP2C1-214ENST00000508532 ERG28Q9UKR5 140 aa11.34□□□□□ -0.59
ATP2C1-214ENST00000508532 COL6A3P12111 3177 aa11.33□□□□□ -0.6
ATP2C1-214ENST00000508532 GRNP28799 593 aaKnown RBP11.33□□□□□ -0.6
ATP2C1-214ENST00000508532 ANXA2RQ3ZCQ2 193 aa11.33□□□□□ -0.6
ATP2C1-214ENST00000508532 RNF185Q96GF1 192 aa11.33□□□□□ -0.6
ATP2C1-214ENST00000508532 E9PLD3 99 aa11.33□□□□□ -0.6
ATP2C1-214ENST00000508532 M0R1W7 72 aa11.33□□□□□ -0.6
ATP2C1-214ENST00000508532 IGKV3D-20A0A0C4DH25 116 aa11.33□□□□□ -0.6
ATP2C1-214ENST00000508532 NPC2P61916 151 aa11.33□□□□□ -0.6
ATP2C1-214ENST00000508532 ZFAND6Q6FIF0 208 aa11.33□□□□□ -0.6
ATP2C1-214ENST00000508532 F6UB75 175 aa11.33□□□□□ -0.6
ATP2C1-214ENST00000508532 FCN3O75636 299 aa11.33□□□□□ -0.6
ATP2C1-214ENST00000508532 C9orf139Q6ZV77 190 aa11.33□□□□□ -0.6
ATP2C1-214ENST00000508532 BUB3O43684 328 aa11.32□□□□□ -0.6
ATP2C1-214ENST00000508532 SAA4P35542 130 aa11.32□□□□□ -0.6
ATP2C1-214ENST00000508532 INSL3P51460 131 aa11.32□□□□□ -0.6
ATP2C1-214ENST00000508532 PPDPFLQ8WWR9 84 aa11.32□□□□□ -0.6
ATP2C1-214ENST00000508532 TM2D2Q9BX73 214 aa11.32□□□□□ -0.6
ATP2C1-214ENST00000508532 PTPRQQ9UMZ3 2332 aa11.32□□□□□ -0.6
ATP2C1-214ENST00000508532 TRAV12-3A0A0B4J271 114 aa11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 GAGE2BQ13066 116 aa11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 GAGE2EQ4V326 116 aa11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 VCX2Q9H322 139 aa11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 GAGE2DQ9UEU5 116 aa11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 TRAV41A0A0B4J266 112 aa11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 GNRH2O43555 120 aa11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 FAM110DQ8TAY7 271 aaPredicted RBP11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 LINC00477Q96M19 166 aa11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 TRAV26-1A0A087WT03 109 aa11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 IGHV7-81A0A0B4J1V7 117 aa11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 OVOL1O14753 267 aa11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 NACAE9PAV3 2078 aa11.31□□□□□ -0.6
ATP2C1-214ENST00000508532 TMEM262E9PQX1 116 aa11.3□□□□□ -0.6
ATP2C1-214ENST00000508532 IGF2RP11717 2491 aa11.3□□□□□ -0.6
ATP2C1-214ENST00000508532 MINOS1Q5TGZ0 78 aa11.3□□□□□ -0.6
ATP2C1-214ENST00000508532 HHLA3Q9XRX5 114 aa11.3□□□□□ -0.6
ATP2C1-214ENST00000508532 MINOS1-NBL1R4GNA1 71 aa11.3□□□□□ -0.6
ATP2C1-214ENST00000508532 DUSP14O95147 198 aaKnown RBP11.29□□□□□ -0.6
ATP2C1-214ENST00000508532 BRD3OSQ6XYD6 125 aa11.29□□□□□ -0.6
ATP2C1-214ENST00000508532 ANKRD11Q6UB99 2663 aaPredicted RBP11.29□□□□□ -0.6
ATP2C1-214ENST00000508532 SCGB1A1P11684 91 aa11.29□□□□□ -0.6
ATP2C1-214ENST00000508532 FOXI1Q12951 378 aa11.29□□□□□ -0.6
ATP2C1-214ENST00000508532 VCYO14598 125 aa11.29□□□□□ -0.6
ATP2C1-214ENST00000508532 MRGPRG-AS1Q2M3A8 158 aa11.29□□□□□ -0.6
ATP2C1-214ENST00000508532 NPBQ8NG41 125 aa11.29□□□□□ -0.6
ATP2C1-214ENST00000508532 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
ATP2C1-214ENST00000508532 TRBV7-1A0A0A6YYK4 115 aa11.29□□□□□ -0.6
ATP2C1-214ENST00000508532 OOSP1A8MZH6 123 aa11.29□□□□□ -0.6
ATP2C1-214ENST00000508532 OR11H6Q8NGC7 330 aa11.29□□□□□ -0.6
ATP2C1-214ENST00000508532 RAI1Q7Z5J4 1906 aaPredicted RBP11.28□□□□□ -0.6
ATP2C1-214ENST00000508532 LGALS1P09382 135 aaKnown RBP11.28□□□□□ -0.6
ATP2C1-214ENST00000508532 SMAD5-AS1Q9Y6J3 95 aa11.28□□□□□ -0.6
ATP2C1-214ENST00000508532 A0A0U1RRA0 63 aa11.28□□□□□ -0.6
ATP2C1-214ENST00000508532 ZFP2Q6ZN57 461 aa11.28□□□□□ -0.6
ATP2C1-214ENST00000508532 PMVKQ15126 192 aa11.28□□□□□ -0.6
ATP2C1-214ENST00000508532 IGHV3-73A0A0B4J1V6 119 aa11.27□□□□□ -0.6
ATP2C1-214ENST00000508532 HOXB4P17483 251 aaPredicted RBP11.27□□□□□ -0.6
ATP2C1-214ENST00000508532 SDHAF1A6NFY7 115 aa11.27□□□□□ -0.61
ATP2C1-214ENST00000508532 ZNF688P0C7X2 276 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms