RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 PEMTQ9UBM1 199 aa6.09□□□□□ -1.43
SCN1A-207ENST00000507401 STAB2Q8WWQ8 2551 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 TEX22C9J3V5 150 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 TNFSF12O43508 249 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 CSN3P07498 182 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 FRMD6-AS1P0C7T7 363 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 APELAP0DMC3 54 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 FABP2P12104 132 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 PLP1P60201 277 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 KIR3DS1Q14943 382 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 C15orf32Q32M92 178 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 CFAP161Q6P656 301 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 GPHB5Q86YW7 130 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 SBSPONQ8IVN8 264 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 C5orf17Q8NAS9 161 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 STXBP6Q8NFX7 210 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 OR1B1Q8NGR6 318 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 ASCL2Q99929 193 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 NDFIP1Q9BT67 221 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 DERL1Q9BUN8 251 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 GGTLC1Q9BX51 225 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 KRTAP4-5Q9BYR2 181 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 NBEAL2Q6ZNJ1 2754 aa6.08□□□□□ -1.44
SCN1A-207ENST00000507401 MUC21A0A0G2JKD1 596 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 MUC21A0A140T8X8 626 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 OR2T8A6NH00 312 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 C15orf62A8K5M9 175 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 E7EUB6 86 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 F8W1H4 67 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 LGALS9O00182 355 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 UPK2O00526 184 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 TRBV12-3P01733 135 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 CSN1S1P47710 185 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 ERVK-16P61578 105 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 HBBP68871 147 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 CD300EQ496F6 205 aaPredicted RBP6.07□□□□□ -1.44
SCN1A-207ENST00000507401 MUC21Q5SSG8 566 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 C10orf55Q5SWW7 151 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 LINC01545Q5VT33 79 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 EBLN2Q6P2I7 272 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 FOXI2Q6ZQN5 318 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 ERASQ7Z444 233 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 BLNKQ8WV28 456 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 RCHY1Q96PM5 261 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 GPHA2Q96T91 129 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 ZMAT4Q9H898 229 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 THYN1Q9P016 225 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 RNF24Q9Y225 148 aa6.07□□□□□ -1.44
SCN1A-207ENST00000507401 IGLV11-55A0A075B6I3 123 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 TRBV7-1A0A0A6YYK4 115 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 A8MWL6 223 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 C3orf84H3BNL1 204 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 SLC17A3O00476 420 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 NXPH3O95157 252 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 IGHV4-30-4P0DP06 118 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 DEFA4P12838 97 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 LCN12Q6JVE5 192 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 BOD1L2Q8IYS8 172 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 OR10W1Q8NGF6 305 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 EEF1AKMT3Q96AZ1 226 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 SPATA25Q9BR10 227 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 PLEKHA3Q9HB20 300 aa6.06□□□□□ -1.44
SCN1A-207ENST00000507401 KMT2CQ8NEZ4 4911 aaKnown RBP6.05□□□□□ -1.44
SCN1A-207ENST00000507401 HUWE1Q7Z6Z7 4374 aaKnown RBP6.05□□□□□ -1.44
SCN1A-207ENST00000507401 TEX50A0A1B0GTY4 177 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 A0A1B0GXF2 115 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 A0A1W2PPM0 123 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 CGB1A6NKQ9 187 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 PRSS47A8MTI9 375 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 F2Z2F3 143 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 H0Y8G0 127 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 CLEC3BP05452 202 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 HLA-DRB4P13762 266 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 MFAP2P55001 183 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 TCL1AP56279 114 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 DEFB114Q30KQ6 69 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 FAM106AQ4KMX7 169 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 Q6AWC8 147 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 RNASEKQ6P5S7 137 aaKnown RBP6.05□□□□□ -1.44
SCN1A-207ENST00000507401 GTSCR1Q86UQ5 136 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 MRAP2Q96G30 205 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 IGF2BP2-AS1Q96M15 143 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 MGST2Q99735 147 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 TM2D3Q9BRN9 247 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 HEYLQ9NQ87 328 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-207ENST00000507401 TMEM140Q9NV12 185 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 ZNF492Q9P255 531 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 HIGD1BQ9P298 99 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 HLA-DRB4X5D2U9 266 aa6.05□□□□□ -1.44
SCN1A-207ENST00000507401 TRAV3A0A0B4J244 114 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 TRAV8-6A0A0B4J262 113 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 ZNF785A8K8V0 405 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 OR11H12B2RN74 326 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 PRSS46E5RG02 174 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 C8orf88P0DMB2 117 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 ARL3P36405 182 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 LGALS9BQ3B8N2 356 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 LGALS9CQ6DKI2 356 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 C16orf54Q6UWD8 224 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 CLEC19AQ6UXS0 136 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms