RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 CAMPP49913 170 aa9.87□□□□□ -0.83
LMNA-220ENST00000504687 DEFB1P60022 68 aa9.87□□□□□ -0.83
LMNA-220ENST00000504687 RAB4BP61018 213 aa9.87□□□□□ -0.83
LMNA-220ENST00000504687 KCNS1Q96KK3 526 aa9.87□□□□□ -0.83
LMNA-220ENST00000504687 PACRGQ96M98 296 aaPredicted RBP9.87□□□□□ -0.83
LMNA-220ENST00000504687 MAP6D1Q9H9H5 199 aa9.87□□□□□ -0.83
LMNA-220ENST00000504687 CUBNO60494 3623 aa9.86□□□□□ -0.83
LMNA-220ENST00000504687 C7orf71A4D174 169 aa9.86□□□□□ -0.83
LMNA-220ENST00000504687 H3BMM0 161 aa9.86□□□□□ -0.83
LMNA-220ENST00000504687 ZNF324O75467 553 aaPredicted RBP9.86□□□□□ -0.83
LMNA-220ENST00000504687 DEFB131AP59861 70 aa9.86□□□□□ -0.83
LMNA-220ENST00000504687 CACNG7P62955 275 aa9.86□□□□□ -0.83
LMNA-220ENST00000504687 LINC00482Q8N8I6 264 aa9.86□□□□□ -0.83
LMNA-220ENST00000504687 CITED1Q99966 193 aa9.86□□□□□ -0.83
LMNA-220ENST00000504687 SCRT2Q9NQ03 307 aa9.86□□□□□ -0.83
LMNA-220ENST00000504687 TMSB15BA0A087X1C1 80 aa9.85□□□□□ -0.83
LMNA-220ENST00000504687 LOC102724200A0A096LPH7 203 aaPredicted RBP9.85□□□□□ -0.83
LMNA-220ENST00000504687 RNASE4P34096 147 aaKnown RBP9.85□□□□□ -0.83
LMNA-220ENST00000504687 PRIMA1Q86XR5 153 aa9.85□□□□□ -0.83
LMNA-220ENST00000504687 ALKBH7Q9BT30 221 aaPredicted RBP9.85□□□□□ -0.83
LMNA-220ENST00000504687 TMEM191AQ9H0A3 160 aa9.85□□□□□ -0.83
LMNA-220ENST00000504687 SELENOKQ9Y6D0 94 aa9.85□□□□□ -0.83
LMNA-220ENST00000504687 IFITM10A6NMD0 228 aa9.84□□□□□ -0.83
LMNA-220ENST00000504687 INSL3P51460 131 aa9.84□□□□□ -0.83
LMNA-220ENST00000504687 BEAN1Q3B7T3 259 aa9.84□□□□□ -0.83
LMNA-220ENST00000504687 NSUN5P1Q3KNT7 163 aa9.84□□□□□ -0.83
LMNA-220ENST00000504687 FAM104BQ5XKR9 115 aa9.84□□□□□ -0.83
LMNA-220ENST00000504687 HIST2H2BDQ6DRA6 164 aa9.84□□□□□ -0.83
LMNA-220ENST00000504687 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.84□□□□□ -0.83
LMNA-220ENST00000504687 C20orf144Q9BQM9 153 aa9.84□□□□□ -0.83
LMNA-220ENST00000504687 TP53TG3Q9ULZ0 132 aa9.84□□□□□ -0.83
LMNA-220ENST00000504687 NIPBLQ6KC79 2804 aaeCLIP9.83□□□□□ -0.841e-6■■■□□ 18.6
LMNA-220ENST00000504687 SETD2Q9BYW2 2564 aaPredicted RBP9.83□□□□□ -0.84
LMNA-220ENST00000504687 NXPH4O95158 308 aa9.83□□□□□ -0.84
LMNA-220ENST00000504687 AMBPP02760 352 aa9.83□□□□□ -0.84
LMNA-220ENST00000504687 CD33P20138 364 aa9.83□□□□□ -0.84
LMNA-220ENST00000504687 NTF3P20783 257 aa9.83□□□□□ -0.84
LMNA-220ENST00000504687 SRIP30626 198 aa9.83□□□□□ -0.84
LMNA-220ENST00000504687 ASIPP42127 132 aa9.83□□□□□ -0.84
LMNA-220ENST00000504687 ODF3L2Q3SX64 289 aa9.83□□□□□ -0.84
LMNA-220ENST00000504687 ANXA2RQ3ZCQ2 193 aa9.83□□□□□ -0.84
LMNA-220ENST00000504687 GFI1BQ5VTD9 330 aa9.83□□□□□ -0.84
LMNA-220ENST00000504687 LINC00467Q9BRT7 94 aa9.83□□□□□ -0.84
LMNA-220ENST00000504687 U3KQK5 164 aa9.83□□□□□ -0.84
LMNA-220ENST00000504687 NF1P21359 2839 aa9.83□□□□□ -0.84
LMNA-220ENST00000504687 GRIFINA4D1Z8 144 aa9.82□□□□□ -0.84
LMNA-220ENST00000504687 SAP30O75446 220 aa9.82□□□□□ -0.84
LMNA-220ENST00000504687 FAM159AQ6UWV7 190 aa9.82□□□□□ -0.84
LMNA-220ENST00000504687 C18orf32Q8TCD1 76 aa9.82□□□□□ -0.84
LMNA-220ENST00000504687 TPPP3Q9BW30 176 aa9.82□□□□□ -0.84
LMNA-220ENST00000504687 PPBPP02775 128 aa9.81□□□□□ -0.84
LMNA-220ENST00000504687 PF4P02776 101 aa9.81□□□□□ -0.84
LMNA-220ENST00000504687 S100A2P29034 98 aa9.81□□□□□ -0.84
LMNA-220ENST00000504687 LINC00310P59036 64 aa9.81□□□□□ -0.84
LMNA-220ENST00000504687 KIR3DS1Q14943 382 aa9.81□□□□□ -0.84
LMNA-220ENST00000504687 TWIST1Q15672 202 aa9.81□□□□□ -0.84
LMNA-220ENST00000504687 KIAA1644Q3SXP7 199 aa9.81□□□□□ -0.84
LMNA-220ENST00000504687 Q6ZQT7 251 aa9.81□□□□□ -0.84
LMNA-220ENST00000504687 TMEM18Q96B42 140 aa9.81□□□□□ -0.84
LMNA-220ENST00000504687 HIST1H2BLQ99880 126 aa9.81□□□□□ -0.84
LMNA-220ENST00000504687 C2CD3Q4AC94 2353 aa9.81□□□□□ -0.84
LMNA-220ENST00000504687 JMJD1CQ15652 2540 aa9.8□□□□□ -0.84
LMNA-220ENST00000504687 OR11H12B2RN74 326 aa9.8□□□□□ -0.84
LMNA-220ENST00000504687 CRXO43186 299 aaPredicted RBP9.8□□□□□ -0.84
LMNA-220ENST00000504687 RNASE3P12724 160 aaKnown RBP9.8□□□□□ -0.84
LMNA-220ENST00000504687 BAGE3Q86Y29 109 aa9.8□□□□□ -0.84
LMNA-220ENST00000504687 LAMTOR2Q9Y2Q5 125 aa9.8□□□□□ -0.84
LMNA-220ENST00000504687 IGHV1OR15-1A0A075B7D0 117 aa9.79□□□□□ -0.84
LMNA-220ENST00000504687 TRAV12-3A0A0B4J271 114 aa9.79□□□□□ -0.84
LMNA-220ENST00000504687 RBMY1BA6NDE4 496 aaKnown RBP9.79□□□□□ -0.84
LMNA-220ENST00000504687 RBMY1EA6NEQ0 496 aaKnown RBP9.79□□□□□ -0.84
LMNA-220ENST00000504687 KNCNA6PVL3 124 aa9.79□□□□□ -0.84
LMNA-220ENST00000504687 RBMY1DP0C7P1 496 aaKnown RBP9.79□□□□□ -0.84
LMNA-220ENST00000504687 SMIM6P0DI80 62 aa9.79□□□□□ -0.84
LMNA-220ENST00000504687 SPINK13Q1W4C9 94 aa9.79□□□□□ -0.84
LMNA-220ENST00000504687 TRPT1Q86TN4 253 aaKnown RBP9.79□□□□□ -0.84
LMNA-220ENST00000504687 TMEM256Q8N2U0 113 aa9.79□□□□□ -0.84
LMNA-220ENST00000504687 OR10AG1Q8NH19 301 aa9.79□□□□□ -0.84
LMNA-220ENST00000504687 C9orf85Q96MD7 179 aa9.79□□□□□ -0.84
LMNA-220ENST00000504687 C19orf73Q9NVV2 129 aa9.79□□□□□ -0.84
LMNA-220ENST00000504687 H3BVH4 76 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 J3KRW8 73 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 M0R2Z0 102 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 SERF1AO75920 110 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 S100A4P26447 101 aaKnown RBP9.78□□□□□ -0.84
LMNA-220ENST00000504687 AKR1D1P51857 326 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 RIPPLY3P57055 190 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 MRPL51Q4U2R6 128 aaKnown RBP9.78□□□□□ -0.84
LMNA-220ENST00000504687 PIK3CD-AS1Q5SR53 167 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 C9orf66Q5T8R8 295 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 SMIM15Q7Z3B0 74 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 LINC00518Q8N0U6 118 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 DEFB125Q8N687 156 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 WFDC9Q8NEX5 89 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 PTH2Q96A98 100 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 CHCHD1Q96BP2 118 aaKnown RBP9.78□□□□□ -0.84
LMNA-220ENST00000504687 RNF185Q96GF1 192 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 NAGKQ9UJ70 344 aa9.78□□□□□ -0.84
LMNA-220ENST00000504687 TRGV11A0A075B6L2 103 aa9.77□□□□□ -0.85
LMNA-220ENST00000504687 IGHV3-16A0A0C4DH30 117 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms