RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 IGKV2-29A2NJV5 120 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 K7ERJ3 54 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 IGLC1P0CG04 106 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 COX6A1P12074 109 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 IL7P13232 177 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 CKS2P33552 79 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 ASIPP42127 132 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 ATP5EP56381 51 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 NPC2P61916 151 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 BLCAPP62952 87 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 DCDP81605 110 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 CIRBPQ14011 172 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 OR5AS1Q8N127 324 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 OTOSQ8NHW6 89 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 ZNF563Q8TA94 476 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 S100ZQ8WXG8 99 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 HYLS1Q96M11 299 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 RABAC1Q9UI14 185 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 DNAJC15Q9Y5T4 150 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 SCAF11Q99590 1463 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 FYCO1Q9BQS8 1478 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 A0A0C4DFX4 3053 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 PCNTO95613 3336 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 ATG2AQ2TAZ0 1938 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 DLC1Q96QB1 1528 aa1.85□□□□□ -2.11
TRAPPC13-205ENST00000504243 SETXQ7Z333 2677 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 EEA1Q15075 1411 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 KDM5AP29375 1690 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 C17orf112F2Z3M2 114 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 F8W1H4 67 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 M0R2P5 195 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 PROSCO94903 275 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 CRPP02741 224 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 GYPBP06028 91 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 PIPP12273 146 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 SNCAP37840 140 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 FXYD2P54710 66 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 SOSTDC1Q6X4U4 206 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 ATP11AUNQ6ZP68 121 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 Q6ZRN7 208 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 Q6ZS92 163 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 C3orf56Q8N813 242 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 OR2T35Q8NGX2 323 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 ATP6V0E2Q8NHE4 81 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 TSKUQ8WUA8 353 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 CHCHD1Q96BP2 118 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 BCL2L10Q9HD36 194 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 LSM2Q9Y333 95 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 LY96Q9Y6Y9 160 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 SORL1Q92673 2214 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 KDM5DQ9BY66 1539 aa1.84□□□□□ -2.11
TRAPPC13-205ENST00000504243 MDC1Q14676 2089 aaKnown RBP1.84□□□□□ -2.12
TRAPPC13-205ENST00000504243 CUL7Q14999 1698 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 RIC1Q4ADV7 1423 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 SCAPERQ9BY12 1400 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 ABCC3O15438 1527 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 NISCHQ9Y2I1 1504 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 WNK3Q9BYP7 1800 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 J3QLW9 94 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 M0R129 80 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 TIMM17BO60830 172 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 EDF1O60869 148 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 PITX3O75364 302 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 NDUFB6O95139 128 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 CD3DP04234 171 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 CCL4P13236 92 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 DYNLT1P63172 113 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 ZNF720Q7Z2F6 126 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 AQP3Q92482 292 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 POP5Q969H6 163 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 SPTSSAQ969W0 71 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 SMCO4Q9NRQ5 59 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 TMEM242Q9NWH2 141 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 GLI3P10071 1580 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 MYO5AQ9Y4I1 1855 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 MYH6P13533 1939 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 ANAPC1Q9H1A4 1944 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 CHD8Q9HCK8 2581 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 USP24Q9UPU5 2620 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 CHD1O14646 1710 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 ANKRD26Q9UPS8 1709 aa1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 CPSF1Q10570 1443 aaKnown RBP1.83□□□□□ -2.12
TRAPPC13-205ENST00000504243 KIAA2026Q5HYC2 2103 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 GAPVD1Q14C86 1478 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 SCN8AQ9UQD0 1980 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 IGHV1-24A0A0C4DH33 117 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 PDCD5O14737 125 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 OR1I1O60431 355 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 APOC3P02656 99 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 IL5P05113 134 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 COX7CP15954 63 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 KRTDAPP60985 99 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 Q0VG73 95 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 MIC13Q5XKP0 118 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 LINC00471Q8N535 108 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 C15orf53Q8NAA6 179 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 VSTM2AQ8TAG5 236 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 C10orf82Q8WW14 230 aa1.82□□□□□ -2.12
TRAPPC13-205ENST00000504243 SMIM7Q9BQ49 75 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms