RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 UQCR10Q9UDW1 63 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 PSORS1C2Q9UIG4 136 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 LINC00312Q9Y6C7 94 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 NRKQ7Z2Y5 1582 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 MYLKQ15746 1914 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 PTPRBP23467 1997 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 KDM5AP29375 1690 aaKnown RBP1.83□□□□□ -2.12
VPS36-206ENST00000497149 CCDC88CQ9P219 2028 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 COL4A2P08572 1712 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 RTEL1-TNFRSF6BF6WH68 1400 aa1.83□□□□□ -2.12
VPS36-206ENST00000497149 STRCP1A6NGW2 1772 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 RBBP6Q7Z6E9 1792 aaKnown RBP1.82□□□□□ -2.12
VPS36-206ENST00000497149 N4BP2Q86UW6 1770 aaPredicted RBP1.82□□□□□ -2.12
VPS36-206ENST00000497149 KIAA2026Q5HYC2 2103 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 COL11A1P12107 1806 aaPredicted RBP1.82□□□□□ -2.12
VPS36-206ENST00000497149 A0A0J9YX75 114 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 TRBV10-2A0A0K0K1G8 114 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 UBE2L5PA0A1B0GUS4 154 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 C19orf71A6NCJ1 209 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 A6NIN4 97 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 H7C2G1 150 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 J3QLW9 94 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 GNGT2O14610 69 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 ATP5EP56381 51 aaPredicted RBP1.82□□□□□ -2.12
VPS36-206ENST00000497149 KRTDAPP60985 99 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 SUPT4H1P63272 117 aaKnown RBP1.82□□□□□ -2.12
VPS36-206ENST00000497149 UBE2L3P68036 154 aaKnown RBP1.82□□□□□ -2.12
VPS36-206ENST00000497149 DEFA5Q01523 94 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 ADIRFQ15847 76 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 FAM74A1Q5RGS3 127 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 LYZL1Q6UWQ5 148 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 LINC00471Q8N535 108 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 CCL4L1Q8NHW4 92 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 VSTM2AQ8TAG5 236 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 AQP3Q92482 292 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 S100A16Q96FQ6 103 aaKnown RBP1.82□□□□□ -2.12
VPS36-206ENST00000497149 LINC00052Q96N35 136 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 MGST2Q99735 147 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 NABP2Q9BQ15 211 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 SMIM7Q9BQ49 75 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 CLIP1P30622 1438 aa1.82□□□□□ -2.12
VPS36-206ENST00000497149 PTPRSQ13332 1948 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 ADGRB3O60242 1522 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 TOPBP1Q92547 1522 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 NUMA1Q14980 2115 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 PIK3C2AO00443 1686 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 CHD1O14646 1710 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 TRAV7A0A075B6U4 112 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 ZNF737O75373 536 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 MT-ATP8P03928 68 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 ESRGQ1W209 222 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 PCOTHQ58A44 107 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 C10orf105Q8TEF2 133 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 CLEC2BQ92478 149 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 POP5Q969H6 163 aaKnown RBP1.81□□□□□ -2.12
VPS36-206ENST00000497149 LSM10Q969L4 123 aaKnown RBP1.81□□□□□ -2.12
VPS36-206ENST00000497149 TXNDC17Q9BRA2 123 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 SLC50A1Q9BRV3 221 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 REG4Q9BYZ8 158 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 TTTY12Q9BZ98 90 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 CST11Q9H112 138 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 CXCL16Q9H2A7 254 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 FAM215AQ9Y5M1 114 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 MINOS1-NBL1R4GNA1 71 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 DOCK1Q14185 1865 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 GREB1Q4ZG55 1949 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 KIAA1549Q9HCM3 1950 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 RIC1Q4ADV7 1423 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 COL1A1P02452 1464 aaPredicted RBP1.81□□□□□ -2.12
VPS36-206ENST00000497149 FYCO1Q9BQS8 1478 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 MYO18AQ92614 2054 aaKnown RBP1.81□□□□□ -2.12
VPS36-206ENST00000497149 MAP3K1Q13233 1512 aa1.81□□□□□ -2.12
VPS36-206ENST00000497149 ARHGEF28Q8N1W1 1705 aaKnown RBP1.8□□□□□ -2.12
VPS36-206ENST00000497149 MCM3APO60318 1980 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 IGLV3-9A0A075B6K5 115 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 LOC107984156A0A0G2JMH3 177 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 MDFIC2A0A1B0GVS7 189 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 hDV103S1A0JD37 113 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 K7EP34 96 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 M0R233 179 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 GNRH2O43555 120 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 UBL3O95164 117 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 ALKAL2Q6UX46 152 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 C5orf38Q86SI9 138 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 SBSPONQ8IVN8 264 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 ARL17AQ8IVW1 177 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 TSLPQ969D9 159 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 RETNLBQ9BQ08 111 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 MUC4Q99102 2169 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 RIMBP3CA6NJZ7 1639 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 RIMBP3BA6NNM3 1639 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 RIMBP3Q9UFD9 1639 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 CUL7Q14999 1698 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 ANKRD26Q9UPS8 1709 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 KIF20BQ96Q89 1820 aa1.8□□□□□ -2.12
VPS36-206ENST00000497149 NYNRINQ9P2P1 1898 aaKnown RBP1.8□□□□□ -2.12
VPS36-206ENST00000497149 FREM3P0C091 2139 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 TRAV2A0A0B4J234 112 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 IGLC7A0M8Q6 106 aa1.79□□□□□ -2.12
VPS36-206ENST00000497149 MRPS14O60783 128 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms