RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 ZNF575Q86XF7 245 aa15.78■□□□□ 0.12
ECHDC3-205ENST00000496136 P01737 135 aa15.77■□□□□ 0.12
ECHDC3-205ENST00000496136 APOC3P02656 99 aa15.77■□□□□ 0.12
ECHDC3-205ENST00000496136 SFRP2Q96HF1 295 aa15.77■□□□□ 0.12
ECHDC3-205ENST00000496136 OVOL2Q9BRP0 275 aa15.77■□□□□ 0.12
ECHDC3-205ENST00000496136 LINC00467Q9BRT7 94 aa15.77■□□□□ 0.12
ECHDC3-205ENST00000496136 TP53TG1Q9Y2A0 90 aa15.77■□□□□ 0.12
ECHDC3-205ENST00000496136 ZNF705GA8MUZ8 300 aaPredicted RBP15.77■□□□□ 0.11
ECHDC3-205ENST00000496136 RPL19P84098 196 aaKnown RBP15.77■□□□□ 0.11
ECHDC3-205ENST00000496136 LINC01559Q495D7 138 aa15.77■□□□□ 0.11
ECHDC3-205ENST00000496136 OSTCQ9NRP0 149 aa15.77■□□□□ 0.11
ECHDC3-205ENST00000496136 TP53TG3Q9ULZ0 132 aa15.77■□□□□ 0.11
ECHDC3-205ENST00000496136 X6R8D5 127 aa15.77■□□□□ 0.11
ECHDC3-205ENST00000496136 B4DEV8 164 aa15.76■□□□□ 0.11
ECHDC3-205ENST00000496136 GNRH2O43555 120 aa15.76■□□□□ 0.11
ECHDC3-205ENST00000496136 OR11H2Q8NH07 326 aa15.76■□□□□ 0.11
ECHDC3-205ENST00000496136 KCNS1Q96KK3 526 aa15.76■□□□□ 0.11
ECHDC3-205ENST00000496136 B9D2Q9BPU9 175 aa15.76■□□□□ 0.11
ECHDC3-205ENST00000496136 TM2D3Q9BRN9 247 aa15.76■□□□□ 0.11
ECHDC3-205ENST00000496136 RETNQ9HD89 108 aa15.76■□□□□ 0.11
ECHDC3-205ENST00000496136 TMEM189A5PLL7 270 aa15.75■□□□□ 0.11
ECHDC3-205ENST00000496136 AZU1P20160 251 aa15.75■□□□□ 0.11
ECHDC3-205ENST00000496136 NEU1Q99519 415 aa15.75■□□□□ 0.11
ECHDC3-205ENST00000496136 TMSB15BA0A087X1C1 80 aa15.75■□□□□ 0.11
ECHDC3-205ENST00000496136 OR2D3Q8NGH3 330 aa15.75■□□□□ 0.11
ECHDC3-205ENST00000496136 CBY3A6NI87 242 aa15.74■□□□□ 0.11
ECHDC3-205ENST00000496136 C15orf54Q8N8G6 183 aa15.74■□□□□ 0.11
ECHDC3-205ENST00000496136 OR10G8Q8NGN5 311 aa15.74■□□□□ 0.11
ECHDC3-205ENST00000496136 SMIM9A6NGZ8 99 aa15.73■□□□□ 0.11
ECHDC3-205ENST00000496136 GATCO43716 136 aaKnown RBP15.73■□□□□ 0.11
ECHDC3-205ENST00000496136 TYMSP04818 313 aa15.73■□□□□ 0.11
ECHDC3-205ENST00000496136 RRN3P1Q2M238 152 aa15.73■□□□□ 0.11
ECHDC3-205ENST00000496136 RPP21Q9H633 154 aaKnown RBP15.73■□□□□ 0.11
ECHDC3-205ENST00000496136 CLRN3Q8NCR9 226 aa15.72■□□□□ 0.11
ECHDC3-205ENST00000496136 SPATA25Q9BR10 227 aa15.72■□□□□ 0.11
ECHDC3-205ENST00000496136 V9GYV3 84 aa15.72■□□□□ 0.11
ECHDC3-205ENST00000496136 GRIFINA4D1Z8 144 aa15.72■□□□□ 0.11
ECHDC3-205ENST00000496136 RNF212Q495C1 297 aa15.72■□□□□ 0.11
ECHDC3-205ENST00000496136 SVBPQ8N300 66 aa15.72■□□□□ 0.11
ECHDC3-205ENST00000496136 MDFICQ9P1T7 246 aa15.72■□□□□ 0.11
ECHDC3-205ENST00000496136 TENM3Q9P273 2699 aa15.71■□□□□ 0.11
ECHDC3-205ENST00000496136 MT-ND4LP03901 98 aa15.7■□□□□ 0.1
ECHDC3-205ENST00000496136 GZMBP10144 247 aa15.7■□□□□ 0.1
ECHDC3-205ENST00000496136 RNASE8Q8TDE3 154 aaKnown RBP15.7■□□□□ 0.1
ECHDC3-205ENST00000496136 TRGV11A0A075B6L2 103 aa15.7■□□□□ 0.1
ECHDC3-205ENST00000496136 IGHV3-16A0A0C4DH30 117 aa15.7■□□□□ 0.1
ECHDC3-205ENST00000496136 TMEM263Q8WUH6 116 aaKnown RBP15.7■□□□□ 0.1
ECHDC3-205ENST00000496136 C7orf77A4D0Y5 90 aa15.69■□□□□ 0.1
ECHDC3-205ENST00000496136 MIFP14174 115 aa15.69■□□□□ 0.1
ECHDC3-205ENST00000496136 RPS20P60866 119 aaKnown RBP15.69■□□□□ 0.1
ECHDC3-205ENST00000496136 CT83Q5H943 113 aa15.69■□□□□ 0.1
ECHDC3-205ENST00000496136 DNLZQ5SXM8 178 aa15.69■□□□□ 0.1
ECHDC3-205ENST00000496136 ZNF493Q6ZR52 646 aa15.69■□□□□ 0.1
ECHDC3-205ENST00000496136 C11orf72Q8NBR9 251 aa15.69■□□□□ 0.1
ECHDC3-205ENST00000496136 ANAPC16Q96DE5 110 aa15.69■□□□□ 0.1
ECHDC3-205ENST00000496136 XKRY2A2RUG3 117 aa15.68■□□□□ 0.1
ECHDC3-205ENST00000496136 A8MWL6 223 aa15.68■□□□□ 0.1
ECHDC3-205ENST00000496136 PPP1R2P9O14990 202 aa15.68■□□□□ 0.1
ECHDC3-205ENST00000496136 SNAPINO95295 136 aa15.68■□□□□ 0.1
ECHDC3-205ENST00000496136 RNASE3P12724 160 aaKnown RBP15.68■□□□□ 0.1
ECHDC3-205ENST00000496136 Q8NAQ8 132 aa15.68■□□□□ 0.1
ECHDC3-205ENST00000496136 ZMAT4Q9H898 229 aa15.68■□□□□ 0.1
ECHDC3-205ENST00000496136 GSN-AS1Q9NRJ2 163 aa15.68■□□□□ 0.1
ECHDC3-205ENST00000496136 PLAC8L1A1L4L8 177 aa15.67■□□□□ 0.1
ECHDC3-205ENST00000496136 ATP6V1G1O75348 118 aa15.67■□□□□ 0.1
ECHDC3-205ENST00000496136 CXCL1P09341 107 aa15.67■□□□□ 0.1
ECHDC3-205ENST00000496136 ASIPP42127 132 aa15.67■□□□□ 0.1
ECHDC3-205ENST00000496136 C16orf74Q96GX8 76 aa15.67■□□□□ 0.1
ECHDC3-205ENST00000496136 IGHV4-28A0A0C4DH34 117 aa15.67■□□□□ 0.1
ECHDC3-205ENST00000496136 S100A4P26447 101 aaKnown RBP15.67■□□□□ 0.1
ECHDC3-205ENST00000496136 MUC4Q99102 2169 aa15.66■□□□□ 0.1
ECHDC3-205ENST00000496136 PRKDCP78527 4128 aaKnown RBP15.66■□□□□ 0.1
ECHDC3-205ENST00000496136 RHEBQ15382 184 aa15.66■□□□□ 0.1
ECHDC3-205ENST00000496136 TSKUQ8WUA8 353 aa15.66■□□□□ 0.1
ECHDC3-205ENST00000496136 DEFB4AO15263 64 aa15.65■□□□□ 0.1
ECHDC3-205ENST00000496136 ARMS2P0C7Q2 107 aa15.65■□□□□ 0.1
ECHDC3-205ENST00000496136 GTSF1Q8WW33 167 aa15.65■□□□□ 0.1
ECHDC3-205ENST00000496136 RPS10P5Q9NQ39 176 aa15.65■□□□□ 0.1
ECHDC3-205ENST00000496136 IL36BQ9NZH7 164 aa15.65■□□□□ 0.1
ECHDC3-205ENST00000496136 COL7A1Q02388 2944 aa15.65■□□□□ 0.1
ECHDC3-205ENST00000496136 H3BVH4 76 aa15.64■□□□□ 0.1
ECHDC3-205ENST00000496136 IGLC6P0CF74 106 aa15.64■□□□□ 0.1
ECHDC3-205ENST00000496136 CTDSP1Q9GZU7 261 aa15.64■□□□□ 0.1
ECHDC3-205ENST00000496136 NHLRC4P0CG21 123 aaPredicted RBP15.64■□□□□ 0.09
ECHDC3-205ENST00000496136 EMP1P54849 157 aa15.64■□□□□ 0.09
ECHDC3-205ENST00000496136 TCL1AP56279 114 aa15.64■□□□□ 0.09
ECHDC3-205ENST00000496136 ZNF415Q09FC8 603 aa15.64■□□□□ 0.09
ECHDC3-205ENST00000496136 ATRAIDQ6UW56 229 aa15.64■□□□□ 0.09
ECHDC3-205ENST00000496136 C9orf85Q96MD7 179 aa15.64■□□□□ 0.09
ECHDC3-205ENST00000496136 SSBP4Q9BWG4 385 aaPredicted RBP15.64■□□□□ 0.09
ECHDC3-205ENST00000496136 TIMM8BQ9Y5J9 83 aaPredicted RBP15.64■□□□□ 0.09
ECHDC3-205ENST00000496136 A0A087WWC5 75 aa15.63■□□□□ 0.09
ECHDC3-205ENST00000496136 FOXA3P55318 350 aaPredicted RBP15.63■□□□□ 0.09
ECHDC3-205ENST00000496136 GFRA4Q9GZZ7 299 aa15.63■□□□□ 0.09
ECHDC3-205ENST00000496136 FAM231BA6NCW3 169 aa15.62■□□□□ 0.09
ECHDC3-205ENST00000496136 SNURFLB1AK76 121 aa15.62■□□□□ 0.09
ECHDC3-205ENST00000496136 FER1L6-AS1Q8NA97 138 aa15.62■□□□□ 0.09
ECHDC3-205ENST00000496136 IL17DQ8TAD2 202 aa15.62■□□□□ 0.09
ECHDC3-205ENST00000496136 SCRT2Q9NQ03 307 aa15.62■□□□□ 0.09
ECHDC3-205ENST00000496136 TMEM242Q9NWH2 141 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms