RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 CPAMD8Q8IZJ3 1885 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 PTPRBP23467 1997 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 MYH9P35579 1960 aaKnown RBP1.69□□□□□ -2.14
VPS36-205ENST00000492650 NSD3Q9BZ95 1437 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 KIF13AQ9H1H9 1805 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 TRAV14DV4A0A0A6YYC5 116 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 PIRTP0C851 137 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 P0C880 135 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 PDE6HQ13956 83 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 IGFBP7Q16270 282 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 KRTAP13-2Q52LG2 175 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 KRTAP26-1Q6PEX3 210 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 ZNF833PQ6ZTB9 187 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 DYNLRB2Q8TF09 96 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 Q9H521 79 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 ARHGAP32A7KAX9 2087 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 NCKAP5O14513 1909 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 SDK2Q58EX2 2172 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 MUC4Q99102 2169 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 CITO14578 2027 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 ADGRL2O95490 1459 aa1.69□□□□□ -2.14
VPS36-205ENST00000492650 GLI3P10071 1580 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 MYH13Q9UKX3 1938 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 USP54Q70EL1 1684 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 TRAV2A0A0B4J234 112 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 FAM24AA6NFZ4 105 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 SNCGO76070 127 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 IGLV3-19P01714 112 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 PIPP12273 146 aaPredicted RBP1.68□□□□□ -2.14
VPS36-205ENST00000492650 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 SPANXN1Q5VSR9 72 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 CLECL1Q8IZS7 167 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 Q8N8P6 123 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 C10orf105Q8TEF2 133 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 ZNF431Q8TF32 576 aaPredicted RBP1.68□□□□□ -2.14
VPS36-205ENST00000492650 TSKUQ8WUA8 353 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 DSCR8Q96T75 97 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 TIMM21Q9BVV7 248 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 DPY30Q9C005 99 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 SCP2D1Q9UJQ7 156 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 PLXNA3P51805 1871 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 ALPK3Q96L96 1907 aa1.68□□□□□ -2.14
VPS36-205ENST00000492650 STRCQ7RTU9 1775 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 HEATR5BQ9P2D3 2071 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 PRDM2Q13029 1718 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 A0A0G2JQZ4 141 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 IGLV6-57P01721 117 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 UBA52P62987 128 aaKnown RBP1.67□□□□□ -2.14
VPS36-205ENST00000492650 ELOBQ15370 118 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 TPRXLQ17RH7 258 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 PRR9Q5T870 116 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 C4orf33Q8N1A6 199 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 NDUFA12Q9UI09 145 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 SCN3AQ9NY46 2000 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 TEX14Q8IWB6 1497 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 FREM3P0C091 2139 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 MYO16Q9Y6X6 1858 aa1.67□□□□□ -2.14
VPS36-205ENST00000492650 SHANK1Q9Y566 2161 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 MYH1P12882 1939 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 HELZP42694 1942 aaKnown RBP1.66□□□□□ -2.14
VPS36-205ENST00000492650 A0A1W2PNN7 141 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 LINC00032P0C843 101 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 INSL4Q14641 139 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 C1orf137Q5JT78 98 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.66□□□□□ -2.14
VPS36-205ENST00000492650 C5orf38Q86SI9 138 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 SBSPONQ8IVN8 264 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 OR10AG1Q8NH19 301 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 TMEM141Q96I45 108 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 AP4S1Q9Y587 144 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 MED14O60244 1454 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 AKAP11Q9UKA4 1901 aa1.66□□□□□ -2.14
VPS36-205ENST00000492650 GPR179Q6PRD1 2367 aa1.65□□□□□ -2.14
VPS36-205ENST00000492650 MGAMO43451 1857 aa1.65□□□□□ -2.14
VPS36-205ENST00000492650 PIGBOS1A0A0B4J2F0 54 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 H3BQ15 152 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 ATP5EP56381 51 aaPredicted RBP1.65□□□□□ -2.15
VPS36-205ENST00000492650 CNBPP62633 177 aaKnown RBP1.65□□□□□ -2.15
VPS36-205ENST00000492650 Q1T7F1 81 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 SPACA4Q8TDM5 124 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 C4orf3Q8WVX3 66 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 PPDPFLQ8WWR9 84 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 DPH3P1Q9H4G8 78 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 TMEM106BQ9NUM4 274 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 LINC00312Q9Y6C7 94 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 COL24A1Q17RW2 1714 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 BCORL1Q5H9F3 1711 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 RP1P56715 2156 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 RTEL1-TNFRSF6BF6WH68 1400 aa1.65□□□□□ -2.15
VPS36-205ENST00000492650 AKAP12Q02952 1782 aa1.64□□□□□ -2.15
VPS36-205ENST00000492650 MYLKQ15746 1914 aa1.64□□□□□ -2.15
VPS36-205ENST00000492650 UBE2L5PA0A1B0GUS4 154 aa1.64□□□□□ -2.15
VPS36-205ENST00000492650 RBAKDNA6NC62 111 aa1.64□□□□□ -2.15
VPS36-205ENST00000492650 SSSCA1O60232 199 aa1.64□□□□□ -2.15
VPS36-205ENST00000492650 IGHV3-33P01772 117 aa1.64□□□□□ -2.15
VPS36-205ENST00000492650 MT-ATP8P03928 68 aa1.64□□□□□ -2.15
VPS36-205ENST00000492650 COX7CP15954 63 aa1.64□□□□□ -2.15
VPS36-205ENST00000492650 POLR2JP52435 117 aaKnown RBP1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms