RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 NEU1Q99519 415 aa9.97□□□□□ -0.81
NUP188-208ENST00000491502 SRD5A3Q9H8P0 318 aa9.97□□□□□ -0.81
NUP188-208ENST00000491502 C7orf71A4D174 169 aa9.96□□□□□ -0.82
NUP188-208ENST00000491502 KNCNA6PVL3 124 aa9.96□□□□□ -0.82
NUP188-208ENST00000491502 A8MTW9 85 aa9.96□□□□□ -0.82
NUP188-208ENST00000491502 A8MZ25 164 aa9.96□□□□□ -0.82
NUP188-208ENST00000491502 C1orf196B1AJZ1 125 aa9.96□□□□□ -0.82
NUP188-208ENST00000491502 ZNF80P51504 273 aaPredicted RBP9.96□□□□□ -0.82
NUP188-208ENST00000491502 TCL1AP56279 114 aa9.96□□□□□ -0.82
NUP188-208ENST00000491502 COL7A1Q02388 2944 aa9.96□□□□□ -0.82
NUP188-208ENST00000491502 F2Z2F3 143 aa9.95□□□□□ -0.82
NUP188-208ENST00000491502 CA1P00915 261 aaPredicted RBP9.95□□□□□ -0.82
NUP188-208ENST00000491502 MT-ND6P03923 174 aa9.95□□□□□ -0.82
NUP188-208ENST00000491502 FRMD6-AS1P0C7T7 363 aa9.95□□□□□ -0.82
NUP188-208ENST00000491502 DEFB1P60022 68 aa9.95□□□□□ -0.82
NUP188-208ENST00000491502 RIGQ13278 110 aa9.95□□□□□ -0.82
NUP188-208ENST00000491502 ODF3L2Q3SX64 289 aa9.95□□□□□ -0.82
NUP188-208ENST00000491502 GDF5OSQ5U4N7 250 aa9.95□□□□□ -0.82
NUP188-208ENST00000491502 FAM159AQ6UWV7 190 aa9.95□□□□□ -0.82
NUP188-208ENST00000491502 NUP35Q8NFH5 326 aa9.95□□□□□ -0.82
NUP188-208ENST00000491502 C20orf144Q9BQM9 153 aa9.95□□□□□ -0.82
NUP188-208ENST00000491502 U3KQK5 164 aa9.95□□□□□ -0.82
NUP188-208ENST00000491502 J3KRW8 73 aa9.94□□□□□ -0.82
NUP188-208ENST00000491502 IGKV3-20P01619 116 aa9.94□□□□□ -0.82
NUP188-208ENST00000491502 IGHV4-30-4P0DP06 118 aa9.94□□□□□ -0.82
NUP188-208ENST00000491502 RAB5BP61020 215 aa9.94□□□□□ -0.82
NUP188-208ENST00000491502 C19orf73Q9NVV2 129 aa9.94□□□□□ -0.82
NUP188-208ENST00000491502 TMSB15BA0A087X1C1 80 aa9.93□□□□□ -0.82
NUP188-208ENST00000491502 A0A1B0GUT8 65 aa9.93□□□□□ -0.82
NUP188-208ENST00000491502 MORN3Q6PF18 240 aaPredicted RBP9.93□□□□□ -0.82
NUP188-208ENST00000491502 FER1L6-AS1Q8NA97 138 aa9.93□□□□□ -0.82
NUP188-208ENST00000491502 PGLYRP4Q96LB8 373 aa9.93□□□□□ -0.82
NUP188-208ENST00000491502 WWC2-AS2Q96NR7 200 aa9.93□□□□□ -0.82
NUP188-208ENST00000491502 GNB1LQ9BYB4 327 aa9.93□□□□□ -0.82
NUP188-208ENST00000491502 ZMAT4Q9H898 229 aa9.93□□□□□ -0.82
NUP188-208ENST00000491502 INSP01308 110 aa9.92□□□□□ -0.82
NUP188-208ENST00000491502 HLA-DQA1P01909 254 aa9.92□□□□□ -0.82
NUP188-208ENST00000491502 S100A4P26447 101 aaKnown RBP9.92□□□□□ -0.82
NUP188-208ENST00000491502 ASIPP42127 132 aa9.92□□□□□ -0.82
NUP188-208ENST00000491502 HBBP68871 147 aa9.92□□□□□ -0.82
NUP188-208ENST00000491502 SPINK13Q1W4C9 94 aa9.92□□□□□ -0.82
NUP188-208ENST00000491502 AMTNQ6UX39 209 aa9.92□□□□□ -0.82
NUP188-208ENST00000491502 SBSPONQ8IVN8 264 aa9.92□□□□□ -0.82
NUP188-208ENST00000491502 GTSF1Q8WW33 167 aa9.92□□□□□ -0.82
NUP188-208ENST00000491502 C1QTNF4Q9BXJ3 329 aa9.92□□□□□ -0.82
NUP188-208ENST00000491502 NAGKQ9UJ70 344 aa9.92□□□□□ -0.82
NUP188-208ENST00000491502 TRAV12-3A0A0B4J271 114 aa9.91□□□□□ -0.82
NUP188-208ENST00000491502 M0R2Z0 102 aa9.91□□□□□ -0.82
NUP188-208ENST00000491502 MED14OSP0DP75 135 aa9.91□□□□□ -0.82
NUP188-208ENST00000491502 RAB4BP61018 213 aa9.91□□□□□ -0.82
NUP188-208ENST00000491502 CACNG7P62955 275 aa9.91□□□□□ -0.82
NUP188-208ENST00000491502 PRR9Q5T870 116 aa9.91□□□□□ -0.82
NUP188-208ENST00000491502 GFI1BQ5VTD9 330 aa9.91□□□□□ -0.82
NUP188-208ENST00000491502 MRPL54Q6P161 138 aaKnown RBP9.91□□□□□ -0.82
NUP188-208ENST00000491502 TRPT1Q86TN4 253 aaKnown RBP9.91□□□□□ -0.82
NUP188-208ENST00000491502 TMEM256Q8N2U0 113 aa9.91□□□□□ -0.82
NUP188-208ENST00000491502 TPPP3Q9BW30 176 aa9.91□□□□□ -0.82
NUP188-208ENST00000491502 TRAPPC1Q9Y5R8 145 aa9.91□□□□□ -0.82
NUP188-208ENST00000491502 TRGV11A0A075B6L2 103 aa9.9□□□□□ -0.82
NUP188-208ENST00000491502 IGHV1OR15-1A0A075B7D0 117 aa9.9□□□□□ -0.82
NUP188-208ENST00000491502 IGKV3D-20A0A0C4DH25 116 aa9.9□□□□□ -0.82
NUP188-208ENST00000491502 CD7P09564 240 aa9.9□□□□□ -0.82
NUP188-208ENST00000491502 OR5AL1P0C617 328 aa9.9□□□□□ -0.82
NUP188-208ENST00000491502 GZMBP10144 247 aa9.9□□□□□ -0.82
NUP188-208ENST00000491502 CTRLP40313 264 aa9.9□□□□□ -0.82
NUP188-208ENST00000491502 TDRG1Q3Y452 100 aa9.9□□□□□ -0.82
NUP188-208ENST00000491502 DNLZQ5SXM8 178 aa9.9□□□□□ -0.82
NUP188-208ENST00000491502 LYZL1Q6UWQ5 148 aa9.9□□□□□ -0.82
NUP188-208ENST00000491502 SMIM15Q7Z3B0 74 aa9.9□□□□□ -0.82
NUP188-208ENST00000491502 FRZBQ92765 325 aa9.9□□□□□ -0.82
NUP188-208ENST00000491502 DNAH9Q9NYC9 4486 aa9.89□□□□□ -0.83
NUP188-208ENST00000491502 SNURFLB1AK76 121 aa9.89□□□□□ -0.83
NUP188-208ENST00000491502 SPINK4O60575 86 aa9.89□□□□□ -0.83
NUP188-208ENST00000491502 ZNF324O75467 553 aaPredicted RBP9.89□□□□□ -0.83
NUP188-208ENST00000491502 IGLC6P0CF74 106 aa9.89□□□□□ -0.83
NUP188-208ENST00000491502 ANXA2RQ3ZCQ2 193 aa9.89□□□□□ -0.83
NUP188-208ENST00000491502 TMA7Q9Y2S6 64 aaKnown RBP9.89□□□□□ -0.83
NUP188-208ENST00000491502 TRAV12-2A0A075B6T6 113 aa9.88□□□□□ -0.83
NUP188-208ENST00000491502 GRIFINA4D1Z8 144 aa9.88□□□□□ -0.83
NUP188-208ENST00000491502 TRGC2P03986 189 aa9.88□□□□□ -0.83
NUP188-208ENST00000491502 CAMPP49913 170 aa9.88□□□□□ -0.83
NUP188-208ENST00000491502 ZNF124Q15973 351 aa9.88□□□□□ -0.83
NUP188-208ENST00000491502 MUC21Q5SSG8 566 aa9.88□□□□□ -0.83
NUP188-208ENST00000491502 RCHY1Q96PM5 261 aa9.88□□□□□ -0.83
NUP188-208ENST00000491502 TM2D3Q9BRN9 247 aa9.88□□□□□ -0.83
NUP188-208ENST00000491502 LINC00467Q9BRT7 94 aa9.88□□□□□ -0.83
NUP188-208ENST00000491502 TMEM208Q9BTX3 173 aa9.88□□□□□ -0.83
NUP188-208ENST00000491502 C11orf21Q9P2W6 132 aa9.88□□□□□ -0.83
NUP188-208ENST00000491502 A0A1B0GXF2 115 aa9.87□□□□□ -0.83
NUP188-208ENST00000491502 SNAI2O43623 268 aa9.87□□□□□ -0.83
NUP188-208ENST00000491502 APCSP02743 223 aa9.87□□□□□ -0.83
NUP188-208ENST00000491502 FABP9Q0Z7S8 132 aa9.87□□□□□ -0.83
NUP188-208ENST00000491502 SPANXN1Q5VSR9 72 aa9.87□□□□□ -0.83
NUP188-208ENST00000491502 LINC01587Q99440 93 aa9.87□□□□□ -0.83
NUP188-208ENST00000491502 SSBP4Q9BWG4 385 aaPredicted RBP9.87□□□□□ -0.83
NUP188-208ENST00000491502 CNFNQ9BYD5 112 aa9.87□□□□□ -0.83
NUP188-208ENST00000491502 GOLT1BQ9Y3E0 138 aa9.87□□□□□ -0.83
NUP188-208ENST00000491502 PHLDA3Q9Y5J5 127 aa9.87□□□□□ -0.83
NUP188-208ENST00000491502 RBMY1BA6NDE4 496 aaKnown RBP9.86□□□□□ -0.83
NUP188-208ENST00000491502 RBMY1EA6NEQ0 496 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms