RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 IGHV3-73A0A0B4J1V6 119 aa10.05□□□□□ -0.8
SHOX2-205ENST00000490689 FGF6P10767 208 aa10.05□□□□□ -0.8
SHOX2-205ENST00000490689 TP53TG1Q9Y2A0 90 aa10.05□□□□□ -0.8
SHOX2-205ENST00000490689 PAPPA-AS1Q5QFB9 102 aa10.04□□□□□ -0.8
SHOX2-205ENST00000490689 SMIM2Q9BVW6 85 aa10.04□□□□□ -0.8
SHOX2-205ENST00000490689 A0A087WX48 190 aa10.04□□□□□ -0.8
SHOX2-205ENST00000490689 IGKV3OR2-268A0A0C4DH90 116 aa10.04□□□□□ -0.8
SHOX2-205ENST00000490689 SPRY4Q9C004 299 aa10.04□□□□□ -0.8
SHOX2-205ENST00000490689 CEP192Q8TEP8 1941 aa10.04□□□□□ -0.8
SHOX2-205ENST00000490689 CRIP1P50238 77 aa10.04□□□□□ -0.8
SHOX2-205ENST00000490689 ZNF80P51504 273 aaPredicted RBP10.04□□□□□ -0.8
SHOX2-205ENST00000490689 PRR30Q53SZ7 412 aaPredicted RBP10.04□□□□□ -0.8
SHOX2-205ENST00000490689 C20orf78Q9BR46 151 aa10.04□□□□□ -0.8
SHOX2-205ENST00000490689 Q6ZS92 163 aa10.04□□□□□ -0.8
SHOX2-205ENST00000490689 SONP18583 2426 aaKnown RBP10.03□□□□□ -0.8
SHOX2-205ENST00000490689 TRAV26-1A0A087WT03 109 aa10.03□□□□□ -0.8
SHOX2-205ENST00000490689 TEX22C9J3V5 150 aa10.03□□□□□ -0.8
SHOX2-205ENST00000490689 MEIG1Q5JSS6 88 aa10.03□□□□□ -0.8
SHOX2-205ENST00000490689 SPAG8Q99932 426 aaPredicted RBP10.03□□□□□ -0.8
SHOX2-205ENST00000490689 CRYGCP07315 174 aa10.03□□□□□ -0.8
SHOX2-205ENST00000490689 TRAV8-4A0A0B4J246 113 aa10.03□□□□□ -0.8
SHOX2-205ENST00000490689 PRSS29PA6NIE9 313 aa10.03□□□□□ -0.8
SHOX2-205ENST00000490689 ATP6V0E1O15342 81 aa10.02□□□□□ -0.8
SHOX2-205ENST00000490689 FCN3O75636 299 aa10.02□□□□□ -0.8
SHOX2-205ENST00000490689 KLRB1Q12918 225 aa10.02□□□□□ -0.8
SHOX2-205ENST00000490689 PPDPFLQ8WWR9 84 aa10.02□□□□□ -0.8
SHOX2-205ENST00000490689 RPL39LQ96EH5 51 aaKnown RBP10.02□□□□□ -0.8
SHOX2-205ENST00000490689 SPXQ9BT56 116 aa10.02□□□□□ -0.8
SHOX2-205ENST00000490689 AGRNO00468 2067 aa10.02□□□□□ -0.81
SHOX2-205ENST00000490689 TRBV20-1A0A075B6N2 111 aa10.02□□□□□ -0.81
SHOX2-205ENST00000490689 MYCNOSP40205 109 aa10.02□□□□□ -0.81
SHOX2-205ENST00000490689 C8orf86Q6ZUL3 223 aa10.02□□□□□ -0.81
SHOX2-205ENST00000490689 MUC6Q6W4X9 2439 aa10.02□□□□□ -0.81
SHOX2-205ENST00000490689 C10orf126Q8N4M7 172 aa10.02□□□□□ -0.81
SHOX2-205ENST00000490689 ADARB2-AS1A8MUL3 147 aa10.01□□□□□ -0.81
SHOX2-205ENST00000490689 F6UB75 175 aa10.01□□□□□ -0.81
SHOX2-205ENST00000490689 ZNF688P0C7X2 276 aa10.01□□□□□ -0.81
SHOX2-205ENST00000490689 DEFB1P60022 68 aa10.01□□□□□ -0.81
SHOX2-205ENST00000490689 ZNF876PQ49A33 203 aa10.01□□□□□ -0.81
SHOX2-205ENST00000490689 TLN2Q9Y4G6 2542 aa10.01□□□□□ -0.81
SHOX2-205ENST00000490689 B5MCH6 92 aa10.01□□□□□ -0.81
SHOX2-205ENST00000490689 BRD3OSQ6XYD6 125 aa10.01□□□□□ -0.81
SHOX2-205ENST00000490689 TNFRSF18Q9Y5U5 241 aa10.01□□□□□ -0.81
SHOX2-205ENST00000490689 NCOR2Q9Y618 2525 aa10.01□□□□□ -0.81
SHOX2-205ENST00000490689 GAS8-AS1O95177 125 aa10□□□□□ -0.81
SHOX2-205ENST00000490689 SS18L2Q9UHA2 77 aa10□□□□□ -0.81
SHOX2-205ENST00000490689 FREM2Q5SZK8 3169 aa10□□□□□ -0.81
SHOX2-205ENST00000490689 CD28P10747 220 aa10□□□□□ -0.81
SHOX2-205ENST00000490689 C2orf82Q6UX34 121 aa10□□□□□ -0.81
SHOX2-205ENST00000490689 LINC00477Q96M19 166 aa10□□□□□ -0.81
SHOX2-205ENST00000490689 TCF15Q12870 199 aa10□□□□□ -0.81
SHOX2-205ENST00000490689 CIRBPQ14011 172 aaKnown RBP9.99□□□□□ -0.81
SHOX2-205ENST00000490689 OR11H6Q8NGC7 330 aa9.99□□□□□ -0.81
SHOX2-205ENST00000490689 TRAV41A0A0B4J266 112 aa9.99□□□□□ -0.81
SHOX2-205ENST00000490689 INS-IGF2F8WCM5 200 aa9.99□□□□□ -0.81
SHOX2-205ENST00000490689 VCYO14598 125 aa9.99□□□□□ -0.81
SHOX2-205ENST00000490689 GNRH2O43555 120 aa9.99□□□□□ -0.81
SHOX2-205ENST00000490689 IGLV2-11P01706 119 aa9.99□□□□□ -0.81
SHOX2-205ENST00000490689 SNRPD3P62318 126 aaKnown RBP9.99□□□□□ -0.81
SHOX2-205ENST00000490689 TAL2Q16559 108 aa9.99□□□□□ -0.81
SHOX2-205ENST00000490689 MAPKAPK5-AS1Q8N8E1 139 aa9.99□□□□□ -0.81
SHOX2-205ENST00000490689 C7orf69Q9H7B7 122 aa9.99□□□□□ -0.81
SHOX2-205ENST00000490689 WDFY4Q6ZS81 3184 aa9.99□□□□□ -0.81
SHOX2-205ENST00000490689 C9orf139Q6ZV77 190 aa9.98□□□□□ -0.81
SHOX2-205ENST00000490689 OVOL1O14753 267 aa9.98□□□□□ -0.81
SHOX2-205ENST00000490689 THBDP07204 575 aa9.98□□□□□ -0.81
SHOX2-205ENST00000490689 CTSGP08311 255 aa9.98□□□□□ -0.81
SHOX2-205ENST00000490689 SAA4P35542 130 aa9.98□□□□□ -0.81
SHOX2-205ENST00000490689 HIGD1BQ9P298 99 aa9.98□□□□□ -0.81
SHOX2-205ENST00000490689 PRO1854Q9UHT4 67 aa9.98□□□□□ -0.81
SHOX2-205ENST00000490689 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
SHOX2-205ENST00000490689 ZNF625Q96I27 306 aaPredicted RBP9.97□□□□□ -0.81
SHOX2-205ENST00000490689 USP9YO00507 2555 aaPredicted RBP9.97□□□□□ -0.81
SHOX2-205ENST00000490689 TRAV8-3A0A0A6YYJ7 113 aa9.97□□□□□ -0.81
SHOX2-205ENST00000490689 SDHAF1A6NFY7 115 aa9.97□□□□□ -0.81
SHOX2-205ENST00000490689 SLC25A20O43772 301 aa9.97□□□□□ -0.81
SHOX2-205ENST00000490689 CRYBA4P53673 196 aa9.97□□□□□ -0.81
SHOX2-205ENST00000490689 NTN5Q8WTR8 489 aaPredicted RBP9.97□□□□□ -0.81
SHOX2-205ENST00000490689 KAAG1Q9UBP8 84 aa9.97□□□□□ -0.81
SHOX2-205ENST00000490689 IGLV1-47P01700 117 aa9.97□□□□□ -0.81
SHOX2-205ENST00000490689 INSL3P51460 131 aa9.97□□□□□ -0.81
SHOX2-205ENST00000490689 NOTCH2Q04721 2471 aa9.97□□□□□ -0.81
SHOX2-205ENST00000490689 M0R2P5 195 aa9.96□□□□□ -0.81
SHOX2-205ENST00000490689 DUSP14O95147 198 aaKnown RBP9.96□□□□□ -0.81
SHOX2-205ENST00000490689 RNASE1P07998 156 aaKnown RBP9.96□□□□□ -0.81
SHOX2-205ENST00000490689 FOXI1Q12951 378 aa9.96□□□□□ -0.81
SHOX2-205ENST00000490689 TMEM190Q8WZ59 177 aa9.96□□□□□ -0.81
SHOX2-205ENST00000490689 MYO18BQ8IUG5 2567 aa9.96□□□□□ -0.82
SHOX2-205ENST00000490689 NPFFO15130 113 aa9.96□□□□□ -0.82
SHOX2-205ENST00000490689 PMVKQ15126 192 aa9.96□□□□□ -0.82
SHOX2-205ENST00000490689 C1QTNF4Q9BXJ3 329 aa9.96□□□□□ -0.82
SHOX2-205ENST00000490689 ANKRD11Q6UB99 2663 aaPredicted RBP9.96□□□□□ -0.82
SHOX2-205ENST00000490689 RHPN1-AS1Q9BWJ2 59 aa9.96□□□□□ -0.82
SHOX2-205ENST00000490689 SPANXB1Q9NS25 103 aaPredicted RBP9.96□□□□□ -0.82
SHOX2-205ENST00000490689 CCDC168Q8NDH2 2452 aa9.96□□□□□ -0.82
SHOX2-205ENST00000490689 RNASE13Q5GAN3 156 aaKnown RBP9.95□□□□□ -0.82
SHOX2-205ENST00000490689 ZFP2Q6ZN57 461 aa9.95□□□□□ -0.82
SHOX2-205ENST00000490689 TOMM7Q9P0U1 55 aa9.95□□□□□ -0.82
SHOX2-205ENST00000490689 KNCNA6PVL3 124 aa9.95□□□□□ -0.82
SHOX2-205ENST00000490689 OVOL3O00110 214 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms