RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ADGRB1O14514 1584 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 MYH9P35579 1960 aaKnown RBP2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 CACNA1DQ01668 2161 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 NCKAP5O14513 1909 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 ZSWIM8A7E2V4 1837 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 SLX4Q8IY92 1834 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 TRAV12-1A0A0B4J245 112 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 PIGBOS1A0A0B4J2F0 54 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 GYPBP06028 91 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 PIRTP0C851 137 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 CXCL8P10145 99 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 ADCYAP1P18509 176 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 UBA52P62987 128 aaKnown RBP2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 DYNLRB2Q8TF09 96 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 CCL26Q9Y258 94 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 AP4S1Q9Y587 144 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 NSD3Q9BZ95 1437 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 MYH6P13533 1939 aa2.13□□□□□ -2.07
HMGB1P38-201ENST00000490557 TMEM262E9PQX1 116 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 LINC00032P0C843 101 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 MIR22HGQ0VDD5 57 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 SPANXN1Q5VSR9 72 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 C12orf73Q69YU5 71 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 C9orf62Q8N4C0 152 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 C9orf163Q8N9P6 203 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 C10orf105Q8TEF2 133 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 TSKUQ8WUA8 353 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 DPY30Q9C005 99 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 SCP2D1Q9UJQ7 156 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 CUL7Q14999 1698 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 TRIOBPQ9H2D6 2365 aa2.12□□□□□ -2.07
HMGB1P38-201ENST00000490557 ATG2AQ2TAZ0 1938 aa2.11□□□□□ -2.07
HMGB1P38-201ENST00000490557 C2orf70A6NJV1 201 aa2.11□□□□□ -2.07
HMGB1P38-201ENST00000490557 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
HMGB1P38-201ENST00000490557 ELOBQ15370 118 aa2.11□□□□□ -2.07
HMGB1P38-201ENST00000490557 C4orf33Q8N1A6 199 aa2.11□□□□□ -2.07
HMGB1P38-201ENST00000490557 MYH13Q9UKX3 1938 aa2.11□□□□□ -2.07
HMGB1P38-201ENST00000490557 NRKQ7Z2Y5 1582 aa2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 SCN3AQ9NY46 2000 aa2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 KIF13AQ9H1H9 1805 aa2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 TRAV14DV4A0A0A6YYC5 116 aa2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 TRAV2A0A0B4J234 112 aa2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 TRAV17A0A0B4J275 112 aa2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 A6NIN4 97 aa2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 RPL7L1Q6DKI1 246 aaKnown RBP2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 ZCCHC23Q6ZST2 131 aa2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 FP248Q71RG6 208 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 Q8TAT8 98 aa2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 DSCR8Q96T75 97 aa2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 MYO9BQ13459 2157 aa2.1□□□□□ -2.07
HMGB1P38-201ENST00000490557 PRDM2Q13029 1718 aa2.09□□□□□ -2.07
HMGB1P38-201ENST00000490557 PTPRBP23467 1997 aa2.09□□□□□ -2.07
HMGB1P38-201ENST00000490557 POLR2JP52435 117 aaKnown RBP2.09□□□□□ -2.07
HMGB1P38-201ENST00000490557 ZNF833PQ6ZTB9 187 aa2.09□□□□□ -2.07
HMGB1P38-201ENST00000490557 TMEM141Q96I45 108 aa2.09□□□□□ -2.07
HMGB1P38-201ENST00000490557 VAMP8Q9BV40 100 aa2.09□□□□□ -2.07
HMGB1P38-201ENST00000490557 TIMM21Q9BVV7 248 aa2.09□□□□□ -2.07
HMGB1P38-201ENST00000490557 NDUFA12Q9UI09 145 aa2.09□□□□□ -2.07
HMGB1P38-201ENST00000490557 PCNX2A6NKB5 2137 aa2.09□□□□□ -2.08
HMGB1P38-201ENST00000490557 ARHGAP32A7KAX9 2087 aa2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 SLIT2O94813 1529 aa2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 CPAMD8Q8IZJ3 1885 aa2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 DCDP81605 110 aaKnown RBP2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 PDE6HQ13956 83 aa2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 KRTAP6-3Q3LI67 103 aa2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 S100A7L2Q5SY68 101 aa2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 UNQ5815/PRO19632Q6UWF5 114 aa2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 OR10AG1Q8NH19 301 aa2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 C4orf3Q8WVX3 66 aa2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 TMEM106BQ9NUM4 274 aa2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 SMARCA4P51532 1647 aa2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 QRICH2Q9H0J4 1663 aa2.08□□□□□ -2.08
HMGB1P38-201ENST00000490557 HELZP42694 1942 aaKnown RBP2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 CCDC88CQ9P219 2028 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 HEATR5BQ9P2D3 2071 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 A0A0G2JQZ4 141 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 UBE2L5PA0A1B0GUS4 154 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 SDHAF1A6NFY7 115 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 F8W1H4 67 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 SSSCA1O60232 199 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 SNCAP37840 140 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 ATP5EP56381 51 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 UBE2L3P68036 154 aaKnown RBP2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 RBM3P98179 157 aaKnown RBP2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 C1orf137Q5JT78 98 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 C5orf38Q86SI9 138 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 Q8N8P6 123 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 PPDPFLQ8WWR9 84 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 MUC4Q99102 2169 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 PLXNA3P51805 1871 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 TROQ12816 1431 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 MYH1P12882 1939 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 CCDC18Q5T9S5 1454 aa2.07□□□□□ -2.08
HMGB1P38-201ENST00000490557 MGAMO43451 1857 aa2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 H3BQ15 152 aa2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 PRB4P10163 310 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 CBLN1P23435 193 aa2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 UBE2G1P62253 170 aa2.06□□□□□ -2.08
HMGB1P38-201ENST00000490557 INSL4Q14641 139 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms