RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 GDF5OSQ5U4N7 250 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 HIST1H2BHQ93079 126 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 CLUHP3Q96NS8 147 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 HIST1H2BNQ99877 126 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 HIST1H2BMQ99879 126 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 FAM110AQ9BQ89 295 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 MCRIP2Q9BUT9 160 aaKnown RBP4.58□□□□□ -1.68
VAMP3-203ENST00000487194 TPPP3Q9BW30 176 aa4.58□□□□□ -1.68
VAMP3-203ENST00000487194 IGKV3D-20A0A0C4DH25 116 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 GRIFINA4D1Z8 144 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 KNCNA6PVL3 124 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 J3KRW8 73 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 AMBPP02760 352 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 MED14OSP0DP75 135 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 ASIPP42127 132 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 CACNG7P62955 275 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 ODF3L2Q3SX64 289 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 PRR9Q5T870 116 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 C9orf66Q5T8R8 295 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 LYZL1Q6UWQ5 148 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 FAM159AQ6UWV7 190 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 AMTNQ6UX39 209 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 STHQ8IWL8 128 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 GATD1Q8NB37 220 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 CNFNQ9BYD5 112 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 C11orf21Q9P2W6 132 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 NAGKQ9UJ70 344 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 SORL1Q92673 2214 aa4.57□□□□□ -1.68
VAMP3-203ENST00000487194 TRAV12-3A0A0B4J271 114 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 LOC105371267A0A1B0GV96 52 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 C5orf52A6NGY3 159 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 SNAI2O43623 268 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 ZNF324O75467 553 aaPredicted RBP4.56□□□□□ -1.68
VAMP3-203ENST00000487194 IGKV3-20P01619 116 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 OR5AL1P0C617 328 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 ARMS2P0C7Q2 107 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 FRMD6-AS1P0C7T7 363 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 S100A4P26447 101 aaKnown RBP4.56□□□□□ -1.68
VAMP3-203ENST00000487194 NDUFA6P56556 154 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 NUTF2P61970 127 aaKnown RBP4.56□□□□□ -1.68
VAMP3-203ENST00000487194 SNRPEP62304 92 aaKnown RBP4.56□□□□□ -1.68
VAMP3-203ENST00000487194 TWIST1Q15672 202 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 SPINK13Q1W4C9 94 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 BEAN1Q3B7T3 259 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 KRTAP24-1Q3LI83 254 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 TDRG1Q3Y452 100 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 ANXA2RQ3ZCQ2 193 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 COA6Q5JTJ3 125 aaKnown RBP4.56□□□□□ -1.68
VAMP3-203ENST00000487194 DNLZQ5SXM8 178 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 GFI1BQ5VTD9 330 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 ZNF493Q6ZR52 646 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 SMIM15Q7Z3B0 74 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 SPATA3Q8NHX4 192 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 TMEM158Q8WZ71 300 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 C20orf144Q9BQM9 153 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 ZNF747Q9BV97 191 aa4.56□□□□□ -1.68
VAMP3-203ENST00000487194 SSBP4Q9BWG4 385 aaPredicted RBP4.56□□□□□ -1.68
VAMP3-203ENST00000487194 IGHV4-4A0A075B6R2 117 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 IGHV1OR15-1A0A075B7D0 117 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 M0R2Z0 102 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 UBE2CO00762 179 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 HOXA5P20719 270 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 SLAQ13239 276 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 KIR3DS1Q14943 382 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 OR10J3Q5JRS4 329 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 MUC21Q5SSG8 566 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 SPANXN1Q5VSR9 72 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 SHISA2Q6UWI4 295 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 ZNF575Q86XF7 245 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 C3orf56Q8N813 242 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 WFDC9Q8NEX5 89 aa4.55□□□□□ -1.68
VAMP3-203ENST00000487194 PKD1L1Q8TDX9 2849 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 TRGV11A0A075B6L2 103 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 TRAV12-2A0A075B6T6 113 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 LOC102724200A0A096LPH7 203 aaPredicted RBP4.54□□□□□ -1.68
VAMP3-203ENST00000487194 RBMY1BA6NDE4 496 aaKnown RBP4.54□□□□□ -1.68
VAMP3-203ENST00000487194 RBMY1EA6NEQ0 496 aaKnown RBP4.54□□□□□ -1.68
VAMP3-203ENST00000487194 H3BVH4 76 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 INSP01308 110 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 CD7P09564 240 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 RBMY1DP0C7P1 496 aaKnown RBP4.54□□□□□ -1.68
VAMP3-203ENST00000487194 NTF3P20783 257 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 SRIP30626 198 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 Q0VG73 95 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 ZNF124Q15973 351 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 MORN3Q6PF18 240 aaPredicted RBP4.54□□□□□ -1.68
VAMP3-203ENST00000487194 C12orf54Q6X4T0 127 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 Q6ZQT7 251 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 TRPT1Q86TN4 253 aaKnown RBP4.54□□□□□ -1.68
VAMP3-203ENST00000487194 GTSCR1Q86UQ5 136 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 BAGE3Q86Y29 109 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 LINC00467Q9BRT7 94 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 TMEM191AQ9H0A3 160 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 SCRT2Q9NQ03 307 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 PHLDA3Q9Y5J5 127 aa4.54□□□□□ -1.68
VAMP3-203ENST00000487194 MUC21A0A0G2JKD1 596 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 MUC21A0A140T8X8 626 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 CBY3A6NI87 242 aa4.53□□□□□ -1.68
VAMP3-203ENST00000487194 CRXO43186 299 aaPredicted RBP4.53□□□□□ -1.68
VAMP3-203ENST00000487194 GNRH2O43555 120 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms