RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ARAP1Q96P48 1450 aa0.91□□□□□ -2.26
SMC4-218ENST00000486711 MROH2BQ7Z745 1585 aa0.91□□□□□ -2.26
SMC4-218ENST00000486711 CTTNBP2Q8WZ74 1663 aa0.91□□□□□ -2.26
SMC4-218ENST00000486711 ABCC1P33527 1531 aa0.9□□□□□ -2.26
SMC4-218ENST00000486711 ARHGAP5Q13017 1502 aa0.9□□□□□ -2.26
SMC4-218ENST00000486711 URB2Q14146 1524 aaKnown RBP0.9□□□□□ -2.26
SMC4-218ENST00000486711 K7EIL1 84 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 DPM2O94777 84 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 CCL4P13236 92 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 DR1Q01658 176 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 TAC4Q86UU9 113 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 LZICQ8WZA0 190 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 CFTRP13569 1480 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 LRRC9Q6ZRR7 1453 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 PRXQ9BXM0 1461 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 SHANK2Q9UPX8 1470 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 SYNJ1O43426 1573 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 TIAM1Q13009 1591 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 IQGAP2Q13576 1575 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 CFAP74Q9C0B2 1584 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 GCC2Q8IWJ2 1684 aa0.9□□□□□ -2.27
SMC4-218ENST00000486711 DSPPQ9NZW4 1301 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 PPIP5K1Q6PFW1 1433 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 EPRSP07814 1512 aaKnown RBP0.89□□□□□ -2.27
SMC4-218ENST00000486711 SYCP2Q9BX26 1530 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 LAMC1P11047 1609 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 ABCA5Q8WWZ7 1642 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 CFAP43Q8NDM7 1665 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 EIF4G3O43432 1585 aaKnown RBP0.89□□□□□ -2.27
SMC4-218ENST00000486711 PLXNC1O60486 1568 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 DNMBPQ6XZF7 1577 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 MAGI1Q96QZ7 1491 aaPredicted RBP0.89□□□□□ -2.27
SMC4-218ENST00000486711 IFT140Q96RY7 1462 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 FANCD2Q9BXW9 1451 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 ARHGEF10O15013 1369 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 MED23Q9ULK4 1368 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 SMIM24O75264 130 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 SPINT3P49223 89 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 QRFPP83859 136 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 BATF3Q9NR55 127 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 SPANXCQ9NY87 97 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 CALML5Q9NZT1 146 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 CITO14578 2027 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 KIF14Q15058 1648 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 PTPN23Q9H3S7 1636 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 CDK13Q14004 1512 aaKnown RBP0.89□□□□□ -2.27
SMC4-218ENST00000486711 CLASP1Q7Z460 1538 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 ABCA10Q8WWZ4 1543 aa0.89□□□□□ -2.27
SMC4-218ENST00000486711 SAMD9Q5K651 1589 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 ADGRL2O95490 1459 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 GAPVD1Q14C86 1478 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 IGHV1-24A0A0C4DH33 117 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 PNMA8CA0A1B0GUJ8 204 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 NBEAP1P0C6P0 100 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 CAV3P56539 151 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 PCBD1P61457 104 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 ASB16-AS1Q495Z4 193 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 XAF1Q6GPH4 301 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 CSAG1Q6PB30 78 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 SPATA8Q6RVD6 105 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 Q9H521 79 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 LRRIQ1Q96JM4 1722 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 SHROOM2Q13796 1616 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 ABCA9Q8IUA7 1624 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 ADCY10Q96PN6 1610 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 TRPM2O94759 1503 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 KIAA0586Q9BVV6 1533 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 DUOX2Q9NRD8 1548 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 UGGT2Q9NYU1 1516 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 OVOS2A0A0G2JMS6 1433 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 PTPRGP23470 1445 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 BLMP54132 1417 aaPredicted RBP0.88□□□□□ -2.27
SMC4-218ENST00000486711 ANKRD50Q9ULJ7 1429 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 WIZO95785 1651 aa0.88□□□□□ -2.27
SMC4-218ENST00000486711 ABCA8O94911 1581 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 ARHGEF5Q12774 1597 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 INO80Q9ULG1 1556 aaPredicted RBP0.87□□□□□ -2.27
SMC4-218ENST00000486711 MYOM2P54296 1465 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 CDC42BPAQ5VT25 1732 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 RAPGEF6Q8TEU7 1601 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 PIGBOS1A0A0B4J2F0 54 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 TMEM30CPA0ZSE6 113 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 PAEPP09466 180 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 HIST1H1BP16401 226 aaKnown RBP0.87□□□□□ -2.27
SMC4-218ENST00000486711 IDO2Q6ZQW0 420 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 OTOSQ8NHW6 89 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 MRPL36Q9P0J6 103 aaKnown RBP0.87□□□□□ -2.27
SMC4-218ENST00000486711 PRDM15P57071 1507 aaPredicted RBP0.87□□□□□ -2.27
SMC4-218ENST00000486711 ABCC2Q92887 1545 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 LRRC7Q96NW7 1537 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 TROQ12816 1431 aaPredicted RBP0.87□□□□□ -2.27
SMC4-218ENST00000486711 ANKARQ7Z5J8 1434 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 CROCC2H7BZ55 1655 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 KDM5AP29375 1690 aaKnown RBP0.87□□□□□ -2.27
SMC4-218ENST00000486711 ZC3H13Q5T200 1668 aaKnown RBP0.87□□□□□ -2.27
SMC4-218ENST00000486711 VIRMAQ69YN4 1812 aaKnown RBP0.87□□□□□ -2.27
SMC4-218ENST00000486711 SAMD9LQ8IVG5 1584 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 MAST1Q9Y2H9 1570 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 SETBP1Q9Y6X0 1596 aa0.87□□□□□ -2.27
SMC4-218ENST00000486711 MED14O60244 1454 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms