RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 CNTRLQ7Z7A1 2325 aa1.07□□□□□ -2.24
SMC4-215ENST00000484799 DISP2A7MBM2 1401 aa1.06□□□□□ -2.24
SMC4-215ENST00000484799 PTPRGP23470 1445 aa1.06□□□□□ -2.24
SMC4-215ENST00000484799 TRAV2A0A0B4J234 112 aa1.06□□□□□ -2.24
SMC4-215ENST00000484799 A0A1W2PPM0 123 aa1.06□□□□□ -2.24
SMC4-215ENST00000484799 CD3DP04234 171 aa1.06□□□□□ -2.24
SMC4-215ENST00000484799 MPC1LP0DKB6 136 aa1.06□□□□□ -2.24
SMC4-215ENST00000484799 RHOHQ15669 191 aa1.06□□□□□ -2.24
SMC4-215ENST00000484799 SMIM21Q3B7S5 101 aa1.06□□□□□ -2.24
SMC4-215ENST00000484799 LIMD2Q9BT23 127 aa1.06□□□□□ -2.24
SMC4-215ENST00000484799 DNAJC15Q9Y5T4 150 aa1.06□□□□□ -2.24
SMC4-215ENST00000484799 TMEM30CPA0ZSE6 113 aa1.05□□□□□ -2.24
SMC4-215ENST00000484799 J3QR89 54 aa1.05□□□□□ -2.24
SMC4-215ENST00000484799 NCR2O95944 276 aa1.05□□□□□ -2.24
SMC4-215ENST00000484799 IGF2P01344 180 aa1.05□□□□□ -2.24
SMC4-215ENST00000484799 TSPAN19P0C672 248 aa1.05□□□□□ -2.24
SMC4-215ENST00000484799 ADCYAP1P18509 176 aa1.05□□□□□ -2.24
SMC4-215ENST00000484799 RPL37AP61513 92 aaKnown RBP1.05□□□□□ -2.24
SMC4-215ENST00000484799 NCS1P62166 190 aa1.05□□□□□ -2.24
SMC4-215ENST00000484799 HIST1H1AQ02539 215 aaPredicted RBP1.05□□□□□ -2.24
SMC4-215ENST00000484799 DMAC1Q96GE9 116 aa1.05□□□□□ -2.24
SMC4-215ENST00000484799 TAS2R8Q9NYW2 309 aa1.05□□□□□ -2.24
SMC4-215ENST00000484799 COMMD3Q9UBI1 195 aa1.05□□□□□ -2.24
SMC4-215ENST00000484799 NUPR2A6NF83 97 aa1.04□□□□□ -2.24
SMC4-215ENST00000484799 M0R2Z0 102 aa1.04□□□□□ -2.24
SMC4-215ENST00000484799 TPST1O60507 370 aa1.04□□□□□ -2.24
SMC4-215ENST00000484799 FXYD4P59646 89 aa1.04□□□□□ -2.24
SMC4-215ENST00000484799 ATP6V0E2Q8NHE4 81 aa1.04□□□□□ -2.24
SMC4-215ENST00000484799 PPDPFLQ8WWR9 84 aa1.04□□□□□ -2.24
SMC4-215ENST00000484799 PFDN5Q99471 154 aa1.04□□□□□ -2.24
SMC4-215ENST00000484799 VPS25Q9BRG1 176 aa1.04□□□□□ -2.24
SMC4-215ENST00000484799 MRPL35Q9NZE8 188 aaKnown RBP1.04□□□□□ -2.24
SMC4-215ENST00000484799 KIDINS220Q9ULH0 1771 aa1.03□□□□□ -2.24
SMC4-215ENST00000484799 HELZP42694 1942 aaKnown RBP1.03□□□□□ -2.24
SMC4-215ENST00000484799 EML5Q05BV3 1969 aa1.03□□□□□ -2.24
SMC4-215ENST00000484799 SPAG17Q6Q759 2223 aa1.03□□□□□ -2.24
SMC4-215ENST00000484799 A0A0G2JMM0 328 aa1.03□□□□□ -2.24
SMC4-215ENST00000484799 CDC42EP2O14613 210 aa1.03□□□□□ -2.24
SMC4-215ENST00000484799 CSAG1Q6PB30 78 aa1.03□□□□□ -2.24
SMC4-215ENST00000484799 Q6ZQY7 126 aa1.03□□□□□ -2.24
SMC4-215ENST00000484799 TCEAL4Q96EI5 215 aa1.03□□□□□ -2.24
SMC4-215ENST00000484799 SMIM3Q9BZL3 60 aa1.03□□□□□ -2.24
SMC4-215ENST00000484799 CCDC171Q6TFL3 1326 aa1.03□□□□□ -2.24
SMC4-215ENST00000484799 TRBV20-1A0A075B6N2 111 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 M0R2P5 195 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 HMGN1P05114 100 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 COX4I1P13073 169 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 POLR2JP52435 117 aaKnown RBP1.02□□□□□ -2.25
SMC4-215ENST00000484799 GLYATL3Q5SZD4 288 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 UNQ5815/PRO19632Q6UWF5 114 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 LYPD5Q6UWN5 251 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 ATP11AUNQ6ZP68 121 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 SLC25A26Q70HW3 274 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 DEFB132Q7Z7B7 95 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 ATOH7Q8N100 152 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 PRG4Q92954 1404 aaPredicted RBP1.02□□□□□ -2.25
SMC4-215ENST00000484799 CDK5RAP2Q96SN8 1893 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 ATG5Q9H1Y0 275 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 SAR1AQ9NR31 198 aa1.02□□□□□ -2.25
SMC4-215ENST00000484799 MRPL36Q9P0J6 103 aaKnown RBP1.02□□□□□ -2.25
SMC4-215ENST00000484799 SPTBP11277 2137 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 TRPM7Q96QT4 1865 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 LAMA4Q16363 1823 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 CTTNBP2Q8WZ74 1663 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 TRBV30A0A0K0K1B3 111 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 HIGD1CA8MV81 97 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 IGLC6P0CF74 106 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 CLLU1Q5K131 121 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 XAF1Q6GPH4 301 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 Q6ZS92 163 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 SNX29P2Q8IUI4 249 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 CTAGE3PQ8IX95 158 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 Q8N6K4 173 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 NOP16Q9Y3C1 178 aaKnown RBP1.01□□□□□ -2.25
SMC4-215ENST00000484799 ATG2AQ2TAZ0 1938 aa1.01□□□□□ -2.25
SMC4-215ENST00000484799 ZDBF2Q9HCK1 2354 aa1□□□□□ -2.25
SMC4-215ENST00000484799 TRBV10-1A0A0K0K1A3 114 aa1□□□□□ -2.25
SMC4-215ENST00000484799 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
SMC4-215ENST00000484799 TPT1P8Q9HAU6 139 aa1□□□□□ -2.25
SMC4-215ENST00000484799 CITO14578 2027 aa0.99□□□□□ -2.25
SMC4-215ENST00000484799 J3QLW9 94 aa0.99□□□□□ -2.25
SMC4-215ENST00000484799 IL7P13232 177 aa0.99□□□□□ -2.25
SMC4-215ENST00000484799 CAV3P56539 151 aa0.99□□□□□ -2.25
SMC4-215ENST00000484799 SARNPP82979 210 aaKnown RBP0.99□□□□□ -2.25
SMC4-215ENST00000484799 C10orf99Q6UWK7 81 aa0.99□□□□□ -2.25
SMC4-215ENST00000484799 NDUFA11Q86Y39 141 aa0.99□□□□□ -2.25
SMC4-215ENST00000484799 TSTD1Q8NFU3 115 aa0.99□□□□□ -2.25
SMC4-215ENST00000484799 DYNLRB2Q8TF09 96 aa0.99□□□□□ -2.25
SMC4-215ENST00000484799 CCL19Q99731 98 aa0.99□□□□□ -2.25
SMC4-215ENST00000484799 LSM2Q9Y333 95 aaKnown RBP0.99□□□□□ -2.25
SMC4-215ENST00000484799 CDK12Q9NYV4 1490 aaPredicted RBP0.99□□□□□ -2.25
SMC4-215ENST00000484799 LRP5O75197 1615 aa0.98□□□□□ -2.25
SMC4-215ENST00000484799 CCDC179H3BU77 68 aa0.98□□□□□ -2.25
SMC4-215ENST00000484799 IGKCP01834 107 aa0.98□□□□□ -2.25
SMC4-215ENST00000484799 APOC1P02654 83 aa0.98□□□□□ -2.25
SMC4-215ENST00000484799 FXYD6P3P58550 94 aa0.98□□□□□ -2.25
SMC4-215ENST00000484799 SYNJ1O43426 1573 aa0.98□□□□□ -2.25
SMC4-215ENST00000484799 MYH13Q9UKX3 1938 aa0.97□□□□□ -2.25
SMC4-215ENST00000484799 K7ERU9 68 aa0.97□□□□□ -2.25
SMC4-215ENST00000484799 LINC00694P0DN24 101 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms