RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 C3orf62Q6ZUJ4 267 aa1.57□□□□□ -2.16
VPS13A-211ENST00000484581 ODF3Q96PU9 254 aa1.57□□□□□ -2.16
VPS13A-211ENST00000484581 WDR97A6NE52 1622 aa1.57□□□□□ -2.16
VPS13A-211ENST00000484581 PRG4Q92954 1404 aaPredicted RBP1.57□□□□□ -2.16
VPS13A-211ENST00000484581 KDM5CP41229 1560 aa1.56□□□□□ -2.16
VPS13A-211ENST00000484581 K7ERU9 68 aa1.56□□□□□ -2.16
VPS13A-211ENST00000484581 IGHV3-30P01768 117 aa1.56□□□□□ -2.16
VPS13A-211ENST00000484581 IGHV3-30-5P0DP03 117 aa1.56□□□□□ -2.16
VPS13A-211ENST00000484581 RPS25P62851 125 aaKnown RBP1.56□□□□□ -2.16
VPS13A-211ENST00000484581 RHOHQ15669 191 aa1.56□□□□□ -2.16
VPS13A-211ENST00000484581 SPATA45Q537H7 98 aa1.56□□□□□ -2.16
VPS13A-211ENST00000484581 IDO2Q6ZQW0 420 aa1.56□□□□□ -2.16
VPS13A-211ENST00000484581 LPAR5Q9H1C0 372 aa1.56□□□□□ -2.16
VPS13A-211ENST00000484581 LSM2Q9Y333 95 aaKnown RBP1.56□□□□□ -2.16
VPS13A-211ENST00000484581 KIDINS220Q9ULH0 1771 aa1.55□□□□□ -2.16
VPS13A-211ENST00000484581 TRBV20-1A0A075B6N2 111 aa1.55□□□□□ -2.16
VPS13A-211ENST00000484581 FAM236AA0A1B0GUQ0 79 aa1.55□□□□□ -2.16
VPS13A-211ENST00000484581 FAM236BA0A1B0GV22 79 aa1.55□□□□□ -2.16
VPS13A-211ENST00000484581 NPFFO15130 113 aa1.55□□□□□ -2.16
VPS13A-211ENST00000484581 IGLV3-1P01715 115 aa1.55□□□□□ -2.16
VPS13A-211ENST00000484581 PDE6GP18545 87 aa1.55□□□□□ -2.16
VPS13A-211ENST00000484581 ATP11AUNQ6ZP68 121 aa1.55□□□□□ -2.16
VPS13A-211ENST00000484581 SAR1AQ9NR31 198 aa1.55□□□□□ -2.16
VPS13A-211ENST00000484581 ERG28Q9UKR5 140 aa1.55□□□□□ -2.16
VPS13A-211ENST00000484581 TRAV23DV6A0A075B6W5 121 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 EFCAB10A6NFE3 127 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 M0R2P5 195 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 CDC42EP2O14613 210 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 GYPBP06028 91 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 ADCYAP1P18509 176 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 COPZ1P61923 177 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 ATP6V0E2Q8NHE4 81 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 VPS25Q9BRG1 176 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 LIMD2Q9BT23 127 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 BOKQ9UMX3 212 aaPredicted RBP1.54□□□□□ -2.16
VPS13A-211ENST00000484581 PTPRGP23470 1445 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 UHRF1BP1LA0JNW5 1464 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 BICRAQ9NZM4 1560 aa1.54□□□□□ -2.16
VPS13A-211ENST00000484581 TMEM30CPA0ZSE6 113 aa1.53□□□□□ -2.16
VPS13A-211ENST00000484581 K7EP13 123 aa1.53□□□□□ -2.16
VPS13A-211ENST00000484581 IGF2P01344 180 aa1.53□□□□□ -2.16
VPS13A-211ENST00000484581 OCIAD2Q56VL3 154 aa1.53□□□□□ -2.16
VPS13A-211ENST00000484581 CSAG1Q6PB30 78 aa1.53□□□□□ -2.16
VPS13A-211ENST00000484581 SLC25A26Q70HW3 274 aa1.53□□□□□ -2.16
VPS13A-211ENST00000484581 ATOH7Q8N100 152 aa1.53□□□□□ -2.16
VPS13A-211ENST00000484581 ASCC3Q8N3C0 2202 aaKnown RBP1.53□□□□□ -2.16
VPS13A-211ENST00000484581 TAS2R8Q9NYW2 309 aa1.53□□□□□ -2.16
VPS13A-211ENST00000484581 MUC6Q6W4X9 2439 aa1.52□□□□□ -2.17
VPS13A-211ENST00000484581 COL6A6A6NMZ7 2263 aa1.52□□□□□ -2.17
VPS13A-211ENST00000484581 MED12Q93074 2177 aa1.52□□□□□ -2.17
VPS13A-211ENST00000484581 SPTBP11277 2137 aa1.52□□□□□ -2.17
VPS13A-211ENST00000484581 ARL14EPLP0DKL9 152 aa1.52□□□□□ -2.17
VPS13A-211ENST00000484581 SELENOWP63302 87 aa1.52□□□□□ -2.17
VPS13A-211ENST00000484581 SNX29P2Q8IUI4 249 aa1.52□□□□□ -2.17
VPS13A-211ENST00000484581 SBSPONQ8IVN8 264 aa1.52□□□□□ -2.17
VPS13A-211ENST00000484581 NOP16Q9Y3C1 178 aaKnown RBP1.52□□□□□ -2.17
VPS13A-211ENST00000484581 TRAV2A0A0B4J234 112 aa1.51□□□□□ -2.17
VPS13A-211ENST00000484581 ZNF670-ZNF695F2Z2N8 137 aa1.51□□□□□ -2.17
VPS13A-211ENST00000484581 LYPD5Q6UWN5 251 aa1.51□□□□□ -2.17
VPS13A-211ENST00000484581 AMELYQ99218 206 aa1.51□□□□□ -2.17
VPS13A-211ENST00000484581 C22orf24Q9Y442 160 aa1.51□□□□□ -2.17
VPS13A-211ENST00000484581 PHRF1Q9P1Y6 1649 aaKnown RBP1.51□□□□□ -2.17
VPS13A-211ENST00000484581 ATG2AQ2TAZ0 1938 aa1.5□□□□□ -2.17
VPS13A-211ENST00000484581 A0A0G2JMM0 328 aa1.5□□□□□ -2.17
VPS13A-211ENST00000484581 NUPR2A6NF83 97 aa1.5□□□□□ -2.17
VPS13A-211ENST00000484581 FXYD4P59646 89 aa1.5□□□□□ -2.17
VPS13A-211ENST00000484581 MRPL36Q9P0J6 103 aaKnown RBP1.5□□□□□ -2.17
VPS13A-211ENST00000484581 PEAK1Q9H792 1746 aa1.49□□□□□ -2.17
VPS13A-211ENST00000484581 E9PCH4 1651 aa1.49□□□□□ -2.17
VPS13A-211ENST00000484581 J3QLW9 94 aa1.49□□□□□ -2.17
VPS13A-211ENST00000484581 NCR3O14931 201 aa1.49□□□□□ -2.17
VPS13A-211ENST00000484581 TPST1O60507 370 aa1.49□□□□□ -2.17
VPS13A-211ENST00000484581 POLR2JP52435 117 aaKnown RBP1.49□□□□□ -2.17
VPS13A-211ENST00000484581 DYNLRB2Q8TF09 96 aa1.49□□□□□ -2.17
VPS13A-211ENST00000484581 PPDPFLQ8WWR9 84 aa1.49□□□□□ -2.17
VPS13A-211ENST00000484581 TMEM191AQ9H0A3 160 aa1.49□□□□□ -2.17
VPS13A-211ENST00000484581 IGKCP01834 107 aa1.48□□□□□ -2.17
VPS13A-211ENST00000484581 PYYP10082 97 aa1.48□□□□□ -2.17
VPS13A-211ENST00000484581 IL7P13232 177 aa1.48□□□□□ -2.17
VPS13A-211ENST00000484581 SCIMPQ6UWF3 145 aa1.48□□□□□ -2.17
VPS13A-211ENST00000484581 UNQ5815/PRO19632Q6UWF5 114 aa1.48□□□□□ -2.17
VPS13A-211ENST00000484581 C1orf54Q8WWF1 131 aa1.48□□□□□ -2.17
VPS13A-211ENST00000484581 DMAC1Q96GE9 116 aa1.48□□□□□ -2.17
VPS13A-211ENST00000484581 SDF2Q99470 211 aa1.48□□□□□ -2.17
VPS13A-211ENST00000484581 ERCC6Q03468 1493 aa1.48□□□□□ -2.17
VPS13A-211ENST00000484581 CITO14578 2027 aa1.47□□□□□ -2.17
VPS13A-211ENST00000484581 CASZ1Q86V15 1759 aa1.47□□□□□ -2.17
VPS13A-211ENST00000484581 M0R129 80 aa1.47□□□□□ -2.17
VPS13A-211ENST00000484581 GUCA1AP43080 201 aaPredicted RBP1.47□□□□□ -2.17
VPS13A-211ENST00000484581 RPL37AP61513 92 aaKnown RBP1.47□□□□□ -2.17
VPS13A-211ENST00000484581 LINC00470Q9BZP3 86 aa1.47□□□□□ -2.17
VPS13A-211ENST00000484581 ATG5Q9H1Y0 275 aa1.47□□□□□ -2.17
VPS13A-211ENST00000484581 MRPL35Q9NZE8 188 aaKnown RBP1.47□□□□□ -2.17
VPS13A-211ENST00000484581 CTTNBP2Q8WZ74 1663 aa1.47□□□□□ -2.17
VPS13A-211ENST00000484581 PLXNA2O75051 1894 aa1.47□□□□□ -2.17
VPS13A-211ENST00000484581 LRP5O75197 1615 aa1.47□□□□□ -2.17
VPS13A-211ENST00000484581 MYH9P35579 1960 aaKnown RBP1.47□□□□□ -2.17
VPS13A-211ENST00000484581 KIF13AQ9H1H9 1805 aa1.46□□□□□ -2.18
VPS13A-211ENST00000484581 CXorf51AA0A1B0GTR3 108 aa1.46□□□□□ -2.18
VPS13A-211ENST00000484581 PITX3O75364 302 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms