RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 CHCHD5Q9BSY4 110 aa14.77□□□□□ -0.04
CCM2-214ENST00000481194 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.77□□□□□ -0.04
CCM2-214ENST00000481194 F6UB75 175 aa14.77□□□□□ -0.05
CCM2-214ENST00000481194 DAD1P61803 113 aa14.77□□□□□ -0.05
CCM2-214ENST00000481194 IGHV3-73A0A0B4J1V6 119 aa14.77□□□□□ -0.05
CCM2-214ENST00000481194 IGKV3OR2-268A0A0C4DH90 116 aa14.77□□□□□ -0.05
CCM2-214ENST00000481194 CHTOPQ9Y3Y2 248 aaKnown RBP14.77□□□□□ -0.05
CCM2-214ENST00000481194 HIST1H2BLQ99880 126 aa14.76□□□□□ -0.05
CCM2-214ENST00000481194 CACNA1AO00555 2505 aa14.76□□□□□ -0.05
CCM2-214ENST00000481194 LOC107984156A0A0G2JMH3 177 aa14.76□□□□□ -0.05
CCM2-214ENST00000481194 CD300EQ496F6 205 aaPredicted RBP14.76□□□□□ -0.05
CCM2-214ENST00000481194 ARL17AQ8IVW1 177 aa14.76□□□□□ -0.05
CCM2-214ENST00000481194 MED14OSP0DP75 135 aa14.76□□□□□ -0.05
CCM2-214ENST00000481194 IGLV1-40P01703 118 aa14.76□□□□□ -0.05
CCM2-214ENST00000481194 EGR2P11161 476 aaPredicted RBP14.76□□□□□ -0.05
CCM2-214ENST00000481194 ZNF493Q6ZR52 646 aa14.76□□□□□ -0.05
CCM2-214ENST00000481194 MRPS16Q9Y3D3 137 aaKnown RBP14.76□□□□□ -0.05
CCM2-214ENST00000481194 ODF3Q96PU9 254 aa14.75□□□□□ -0.05
CCM2-214ENST00000481194 SEC11AP67812 179 aa14.75□□□□□ -0.05
CCM2-214ENST00000481194 Q8N8P6 123 aa14.75□□□□□ -0.05
CCM2-214ENST00000481194 C1orf159Q96HA4 380 aa14.75□□□□□ -0.05
CCM2-214ENST00000481194 BRI3O95415 125 aa14.75□□□□□ -0.05
CCM2-214ENST00000481194 SLAQ13239 276 aa14.75□□□□□ -0.05
CCM2-214ENST00000481194 NDUFA7O95182 113 aa14.74□□□□□ -0.05
CCM2-214ENST00000481194 IGHV3-53P01767 116 aa14.74□□□□□ -0.05
CCM2-214ENST00000481194 ZFAND3Q9H8U3 227 aa14.74□□□□□ -0.05
CCM2-214ENST00000481194 DLX4Q92988 240 aaPredicted RBP14.74□□□□□ -0.05
CCM2-214ENST00000481194 ZNF503Q96F45 646 aa14.74□□□□□ -0.05
CCM2-214ENST00000481194 CHD7Q9P2D1 2997 aa14.74□□□□□ -0.05
CCM2-214ENST00000481194 CRPP02741 224 aa14.74□□□□□ -0.05
CCM2-214ENST00000481194 C16orf74Q96GX8 76 aa14.73□□□□□ -0.05
CCM2-214ENST00000481194 MEIG1Q5JSS6 88 aa14.73□□□□□ -0.05
CCM2-214ENST00000481194 IGKCP01834 107 aa14.73□□□□□ -0.05
CCM2-214ENST00000481194 DEFB130BP0DP73 79 aa14.73□□□□□ -0.05
CCM2-214ENST00000481194 DEFB130AP0DP74 79 aa14.73□□□□□ -0.05
CCM2-214ENST00000481194 MRPL51Q4U2R6 128 aaKnown RBP14.73□□□□□ -0.05
CCM2-214ENST00000481194 DMRTA1Q5VZB9 504 aa14.73□□□□□ -0.05
CCM2-214ENST00000481194 LOC105371267A0A1B0GV96 52 aa14.72□□□□□ -0.05
CCM2-214ENST00000481194 AVPP01185 164 aa14.72□□□□□ -0.05
CCM2-214ENST00000481194 ATOH7Q8N100 152 aa14.72□□□□□ -0.05
CCM2-214ENST00000481194 C20orf78Q9BR46 151 aa14.72□□□□□ -0.05
CCM2-214ENST00000481194 OR5A1Q8NGJ0 315 aa14.72□□□□□ -0.05
CCM2-214ENST00000481194 I3L3M4 83 aa14.72□□□□□ -0.05
CCM2-214ENST00000481194 TRAV9-2A0A087WT02 112 aa14.71□□□□□ -0.05
CCM2-214ENST00000481194 H7C2G1 150 aa14.71□□□□□ -0.05
CCM2-214ENST00000481194 C18orf32Q8TCD1 76 aa14.71□□□□□ -0.05
CCM2-214ENST00000481194 RAI1Q7Z5J4 1906 aaPredicted RBP14.71□□□□□ -0.06
CCM2-214ENST00000481194 APRG1Q8IVJ8 170 aa14.71□□□□□ -0.06
CCM2-214ENST00000481194 CFAP161Q6P656 301 aa14.7□□□□□ -0.06
CCM2-214ENST00000481194 TEX43Q6ZNM6 134 aa14.7□□□□□ -0.06
CCM2-214ENST00000481194 SMKR1H3BMG3 65 aa14.7□□□□□ -0.06
CCM2-214ENST00000481194 A0A0J9YX75 114 aa14.7□□□□□ -0.06
CCM2-214ENST00000481194 K7EMI3 77 aa14.7□□□□□ -0.06
CCM2-214ENST00000481194 PLNP26678 52 aa14.7□□□□□ -0.06
CCM2-214ENST00000481194 TMEM141Q96I45 108 aa14.7□□□□□ -0.06
CCM2-214ENST00000481194 PIEZO2Q9H5I5 2752 aa14.7□□□□□ -0.06
CCM2-214ENST00000481194 A0A087WX48 190 aa14.69□□□□□ -0.06
CCM2-214ENST00000481194 TMEM61Q8N0U2 210 aa14.69□□□□□ -0.06
CCM2-214ENST00000481194 MED13LQ71F56 2210 aa14.69□□□□□ -0.06
CCM2-214ENST00000481194 SMIM13P0DJ93 91 aa14.69□□□□□ -0.06
CCM2-214ENST00000481194 ZMAT4Q9H898 229 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 PRAC2D3DTV9 90 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 SHISA2Q6UWI4 295 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 GAGE12BA1L429 117 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 GAGE7O76087 117 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 GAGE12FP0CL80 117 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 GAGE12GP0CL81 117 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 GAGE12IP0CL82 117 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 CEP350Q5VT06 3117 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 CENPFP49454 3210 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 HLA-DRB4P13762 266 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 MALP21145 153 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 KLF5Q13887 457 aaPredicted RBP14.68□□□□□ -0.06
CCM2-214ENST00000481194 HLA-DRB4X5D2U9 266 aa14.68□□□□□ -0.06
CCM2-214ENST00000481194 TRAV8-6A0A0B4J262 113 aa14.67□□□□□ -0.06
CCM2-214ENST00000481194 COL27A1Q8IZC6 1860 aaPredicted RBP14.67□□□□□ -0.06
CCM2-214ENST00000481194 MAP6D1Q9H9H5 199 aa14.67□□□□□ -0.06
CCM2-214ENST00000481194 ARFGEF3Q5TH69 2177 aa14.67□□□□□ -0.06
CCM2-214ENST00000481194 K7EQG2 157 aa14.66□□□□□ -0.06
CCM2-214ENST00000481194 LINC01006Q8NI28 216 aa14.66□□□□□ -0.06
CCM2-214ENST00000481194 GNRH2O43555 120 aa14.66□□□□□ -0.06
CCM2-214ENST00000481194 DEFB114Q30KQ6 69 aa14.65□□□□□ -0.06
CCM2-214ENST00000481194 TRBV25-1A0A075B6N4 114 aa14.65□□□□□ -0.06
CCM2-214ENST00000481194 RHOHQ15669 191 aa14.65□□□□□ -0.06
CCM2-214ENST00000481194 UBE2DNLQ8IWF7 75 aa14.65□□□□□ -0.06
CCM2-214ENST00000481194 GSN-AS1Q9NRJ2 163 aa14.65□□□□□ -0.06
CCM2-214ENST00000481194 SDHAF1A6NFY7 115 aa14.64□□□□□ -0.07
CCM2-214ENST00000481194 GFI1BQ5VTD9 330 aa14.64□□□□□ -0.07
CCM2-214ENST00000481194 DNAJC30Q96LL9 226 aa14.64□□□□□ -0.07
CCM2-214ENST00000481194 F5H768 121 aa14.64□□□□□ -0.07
CCM2-214ENST00000481194 CTAG1AP78358 180 aa14.64□□□□□ -0.07
CCM2-214ENST00000481194 SMIM2Q9BVW6 85 aa14.64□□□□□ -0.07
CCM2-214ENST00000481194 CEP295Q9C0D2 2601 aa14.64□□□□□ -0.07
CCM2-214ENST00000481194 U3KQE9 123 aa14.63□□□□□ -0.07
CCM2-214ENST00000481194 PLEKHB2Q96CS7 222 aa14.63□□□□□ -0.07
CCM2-214ENST00000481194 TRANK1O15050 2925 aa14.63□□□□□ -0.07
CCM2-214ENST00000481194 SYS1-DBNDD2H3BUS1 97 aa14.63□□□□□ -0.07
CCM2-214ENST00000481194 C16orf95Q9H693 158 aa14.63□□□□□ -0.07
CCM2-214ENST00000481194 CTRLP40313 264 aa14.63□□□□□ -0.07
CCM2-214ENST00000481194 ANKRD11Q6UB99 2663 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms