RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 MTORP42345 2549 aa13.61□□□□□ -0.23
MCF2L-221ENST00000469415 HBDP02042 147 aa13.61□□□□□ -0.23
MCF2L-221ENST00000469415 IFI27L1Q96BM0 104 aa13.61□□□□□ -0.23
MCF2L-221ENST00000469415 FBLL1A6NHQ2 334 aaKnown RBP13.61□□□□□ -0.23
MCF2L-221ENST00000469415 RNASE4P34096 147 aaKnown RBP13.61□□□□□ -0.23
MCF2L-221ENST00000469415 LINC01545Q5VT33 79 aa13.61□□□□□ -0.23
MCF2L-221ENST00000469415 RPS20P60866 119 aaKnown RBP13.6□□□□□ -0.23
MCF2L-221ENST00000469415 CLUHP3Q96NS8 147 aa13.6□□□□□ -0.23
MCF2L-221ENST00000469415 MAP1LC3AQ9H492 121 aa13.6□□□□□ -0.23
MCF2L-221ENST00000469415 MSMBP08118 114 aa13.6□□□□□ -0.23
MCF2L-221ENST00000469415 CDKN1BP46527 198 aa13.6□□□□□ -0.23
MCF2L-221ENST00000469415 IGHV4-59P01825 116 aa13.59□□□□□ -0.23
MCF2L-221ENST00000469415 NF1P21359 2839 aa13.59□□□□□ -0.23
MCF2L-221ENST00000469415 SCRT2Q9NQ03 307 aa13.59□□□□□ -0.23
MCF2L-221ENST00000469415 RAB9AP51151 201 aa13.58□□□□□ -0.23
MCF2L-221ENST00000469415 PCP2Q8IVA1 136 aa13.58□□□□□ -0.24
MCF2L-221ENST00000469415 TMEM158Q8WZ71 300 aa13.58□□□□□ -0.24
MCF2L-221ENST00000469415 RHPN1-AS1Q9BWJ2 59 aa13.58□□□□□ -0.24
MCF2L-221ENST00000469415 C7orf71A4D174 169 aa13.58□□□□□ -0.24
MCF2L-221ENST00000469415 GNRH2O43555 120 aa13.58□□□□□ -0.24
MCF2L-221ENST00000469415 NOTCH2Q04721 2471 aa13.57□□□□□ -0.24
MCF2L-221ENST00000469415 MGPP08493 103 aa13.57□□□□□ -0.24
MCF2L-221ENST00000469415 NPFFR1Q9GZQ6 430 aa13.57□□□□□ -0.24
MCF2L-221ENST00000469415 C2CD3Q4AC94 2353 aa13.57□□□□□ -0.24
MCF2L-221ENST00000469415 PRRC2AP48634 2157 aaKnown RBP13.57□□□□□ -0.24
MCF2L-221ENST00000469415 TGFAP01135 160 aa13.57□□□□□ -0.24
MCF2L-221ENST00000469415 GPHB5Q86YW7 130 aa13.57□□□□□ -0.24
MCF2L-221ENST00000469415 C14orf178Q8N769 122 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-221ENST00000469415 TMEM238C9JI98 176 aa13.56□□□□□ -0.24
MCF2L-221ENST00000469415 UBE2V1Q13404 147 aa13.56□□□□□ -0.24
MCF2L-221ENST00000469415 LINC01559Q495D7 138 aa13.56□□□□□ -0.24
MCF2L-221ENST00000469415 K7EMI3 77 aa13.56□□□□□ -0.24
MCF2L-221ENST00000469415 BVES-AS1Q5T3Y7 98 aa13.56□□□□□ -0.24
MCF2L-221ENST00000469415 SMIM15Q7Z3B0 74 aa13.56□□□□□ -0.24
MCF2L-221ENST00000469415 OR10J6PQ8NGY7 276 aa13.56□□□□□ -0.24
MCF2L-221ENST00000469415 FOXC2Q99958 501 aa13.56□□□□□ -0.24
MCF2L-221ENST00000469415 U3KQK5 164 aa13.56□□□□□ -0.24
MCF2L-221ENST00000469415 SAP30O75446 220 aa13.55□□□□□ -0.24
MCF2L-221ENST00000469415 NEGR1Q7Z3B1 354 aa13.55□□□□□ -0.24
MCF2L-221ENST00000469415 COX11Q9Y6N1 276 aa13.55□□□□□ -0.24
MCF2L-221ENST00000469415 IGHV7-4-1A0A0J9YVY3 117 aa13.54□□□□□ -0.24
MCF2L-221ENST00000469415 DEFB112Q30KQ8 113 aa13.54□□□□□ -0.24
MCF2L-221ENST00000469415 RAB37Q96AX2 223 aa13.54□□□□□ -0.24
MCF2L-221ENST00000469415 FAM223BA6NKX1 122 aa13.54□□□□□ -0.24
MCF2L-221ENST00000469415 ANXA2RQ3ZCQ2 193 aa13.54□□□□□ -0.24
MCF2L-221ENST00000469415 FAM223AQ8IWN6 122 aa13.54□□□□□ -0.24
MCF2L-221ENST00000469415 TMEM160Q9NX00 188 aa13.54□□□□□ -0.24
MCF2L-221ENST00000469415 MRPL52Q86TS9 123 aaKnown RBP13.53□□□□□ -0.24
MCF2L-221ENST00000469415 GATD1Q8NB37 220 aa13.53□□□□□ -0.24
MCF2L-221ENST00000469415 OR2K2Q8NGT1 345 aa13.53□□□□□ -0.24
MCF2L-221ENST00000469415 GTSCR1Q86UQ5 136 aa13.53□□□□□ -0.24
MCF2L-221ENST00000469415 ZNF688P0C7X2 276 aa13.53□□□□□ -0.24
MCF2L-221ENST00000469415 IGHG2P01859 326 aa13.52□□□□□ -0.24
MCF2L-221ENST00000469415 HTN1P15515 57 aa13.52□□□□□ -0.24
MCF2L-221ENST00000469415 RPL39LQ96EH5 51 aaKnown RBP13.52□□□□□ -0.24
MCF2L-221ENST00000469415 PHLDA3Q9Y5J5 127 aa13.52□□□□□ -0.24
MCF2L-221ENST00000469415 U3KQE9 123 aa13.52□□□□□ -0.24
MCF2L-221ENST00000469415 A6NDX4 124 aa13.52□□□□□ -0.25
MCF2L-221ENST00000469415 K7EP13 123 aa13.52□□□□□ -0.25
MCF2L-221ENST00000469415 COX8CQ7Z4L0 72 aa13.52□□□□□ -0.25
MCF2L-221ENST00000469415 JPT2Q9H910 190 aa13.52□□□□□ -0.25
MCF2L-221ENST00000469415 JMJD1CQ15652 2540 aa13.52□□□□□ -0.25
MCF2L-221ENST00000469415 TRAV12-2A0A075B6T6 113 aa13.51□□□□□ -0.25
MCF2L-221ENST00000469415 COX8AP10176 69 aa13.51□□□□□ -0.25
MCF2L-221ENST00000469415 C2orf91Q6ZV80 131 aa13.51□□□□□ -0.25
MCF2L-221ENST00000469415 C9orf47Q6ZRZ4 202 aa13.51□□□□□ -0.25
MCF2L-221ENST00000469415 C9orf139Q6ZV77 190 aa13.51□□□□□ -0.25
MCF2L-221ENST00000469415 MEGF9Q9H1U4 602 aa13.51□□□□□ -0.25
MCF2L-221ENST00000469415 RNF223E7ERA6 249 aa13.5□□□□□ -0.25
MCF2L-221ENST00000469415 IGKV2D-26A0A0A0MRZ7 120 aa13.5□□□□□ -0.25
MCF2L-221ENST00000469415 RBAKDNA6NC62 111 aa13.5□□□□□ -0.25
MCF2L-221ENST00000469415 NDUFA4O00483 81 aa13.5□□□□□ -0.25
MCF2L-221ENST00000469415 SMIM17P0DL12 118 aa13.5□□□□□ -0.25
MCF2L-221ENST00000469415 AMMECR1LQ6DCA0 310 aa13.5□□□□□ -0.25
MCF2L-221ENST00000469415 ZFAND2AQ8N6M9 145 aa13.5□□□□□ -0.25
MCF2L-221ENST00000469415 CST9LQ9H4G1 147 aa13.5□□□□□ -0.25
MCF2L-221ENST00000469415 B4DSR2 109 aa13.5□□□□□ -0.25
MCF2L-221ENST00000469415 TRAV12-3A0A0B4J271 114 aa13.49□□□□□ -0.25
MCF2L-221ENST00000469415 TAX1BP3O14907 124 aa13.49□□□□□ -0.25
MCF2L-221ENST00000469415 C19orf54Q5BKX5 351 aa13.49□□□□□ -0.25
MCF2L-221ENST00000469415 MS4A6AQ9H2W1 248 aa13.49□□□□□ -0.25
MCF2L-221ENST00000469415 BEX4Q9NWD9 120 aaPredicted RBP13.49□□□□□ -0.25
MCF2L-221ENST00000469415 OCIAD2Q56VL3 154 aa13.49□□□□□ -0.25
MCF2L-221ENST00000469415 CHD6Q8TD26 2715 aa13.49□□□□□ -0.25
MCF2L-221ENST00000469415 C12orf54Q6X4T0 127 aa13.48□□□□□ -0.25
MCF2L-221ENST00000469415 NACAE9PAV3 2078 aa13.48□□□□□ -0.25
MCF2L-221ENST00000469415 KRTAP10-9P60411 292 aa13.48□□□□□ -0.25
MCF2L-221ENST00000469415 CSTL1Q9H114 145 aa13.48□□□□□ -0.25
MCF2L-221ENST00000469415 A0A087WWL8 130 aa13.48□□□□□ -0.25
MCF2L-221ENST00000469415 CD5LO43866 347 aa13.48□□□□□ -0.25
MCF2L-221ENST00000469415 PPBPP02775 128 aa13.48□□□□□ -0.25
MCF2L-221ENST00000469415 FCER1GP30273 86 aa13.48□□□□□ -0.25
MCF2L-221ENST00000469415 PSMG4Q5JS54 123 aa13.48□□□□□ -0.25
MCF2L-221ENST00000469415 FAM74A4Q5TZK3 123 aa13.48□□□□□ -0.25
MCF2L-221ENST00000469415 DUX3Q96PT4 197 aa13.48□□□□□ -0.25
MCF2L-221ENST00000469415 PSMG3-AS1Q96PY0 264 aa13.48□□□□□ -0.25
MCF2L-221ENST00000469415 TRAV8-6A0A0B4J262 113 aa13.47□□□□□ -0.25
MCF2L-221ENST00000469415 LGALS9BQ3B8N2 356 aa13.47□□□□□ -0.25
MCF2L-221ENST00000469415 LGALS9CQ6DKI2 356 aa13.47□□□□□ -0.25
MCF2L-221ENST00000469415 TMEM190Q8WZ59 177 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms