RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 LEPP41159 167 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 SSTP61278 116 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 HBBP68871 147 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 COX19Q49B96 90 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 PRR31Q5SQ13 230 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 AMTNQ6UX39 209 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 PRIMA1Q86XR5 153 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 STAB1Q9NY15 2570 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 MUC21A0A0G2JKD1 596 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 MUC21A0A140T8X8 626 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 S100A6P06703 90 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 IGLC6P0CF74 106 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 MUC21Q5SSG8 566 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 FER1L6-AS1Q8NA97 138 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 LOC105371267A0A1B0GV96 52 aa15.23■□□□□ 0.03
TMEM53-207ENST00000468117 MT-ND6P03923 174 aa15.23■□□□□ 0.03
TMEM53-207ENST00000468117 CDKN1BP46527 198 aa15.23■□□□□ 0.03
TMEM53-207ENST00000468117 SSBP4Q9BWG4 385 aaPredicted RBP15.23■□□□□ 0.03
TMEM53-207ENST00000468117 TRAV12-3A0A0B4J271 114 aa15.22■□□□□ 0.03
TMEM53-207ENST00000468117 HLA-DQA1P01909 254 aa15.22■□□□□ 0.03
TMEM53-207ENST00000468117 GFI1BQ5VTD9 330 aa15.22■□□□□ 0.03
TMEM53-207ENST00000468117 FXYD7P58549 80 aa15.22■□□□□ 0.03
TMEM53-207ENST00000468117 SNRPEP62304 92 aaKnown RBP15.22■□□□□ 0.03
TMEM53-207ENST00000468117 C7orf71A4D174 169 aa15.21■□□□□ 0.03
TMEM53-207ENST00000468117 TSPOP30536 169 aa15.21■□□□□ 0.03
TMEM53-207ENST00000468117 CTRLP40313 264 aa15.21■□□□□ 0.03
TMEM53-207ENST00000468117 SLAQ13239 276 aa15.21■□□□□ 0.03
TMEM53-207ENST00000468117 ANXA2RQ3ZCQ2 193 aa15.21■□□□□ 0.03
TMEM53-207ENST00000468117 OR2K2Q8NGT1 345 aa15.21■□□□□ 0.03
TMEM53-207ENST00000468117 BORCS7Q96B45 105 aa15.21■□□□□ 0.03
TMEM53-207ENST00000468117 RBMY1BA6NDE4 496 aaKnown RBP15.21■□□□□ 0.02
TMEM53-207ENST00000468117 RBMY1EA6NEQ0 496 aaKnown RBP15.21■□□□□ 0.02
TMEM53-207ENST00000468117 OR11H12B2RN74 326 aa15.21■□□□□ 0.02
TMEM53-207ENST00000468117 RBMY1DP0C7P1 496 aaKnown RBP15.21■□□□□ 0.02
TMEM53-207ENST00000468117 NDUFA6P56556 154 aa15.21■□□□□ 0.02
TMEM53-207ENST00000468117 RIGQ13278 110 aa15.21■□□□□ 0.02
TMEM53-207ENST00000468117 KIAA1644Q3SXP7 199 aa15.21■□□□□ 0.02
TMEM53-207ENST00000468117 A8MTW9 85 aa15.2■□□□□ 0.02
TMEM53-207ENST00000468117 ZNF324O75467 553 aaPredicted RBP15.19■□□□□ 0.02
TMEM53-207ENST00000468117 CD7P09564 240 aa15.19■□□□□ 0.02
TMEM53-207ENST00000468117 APCSP02743 223 aa15.19■□□□□ 0.02
TMEM53-207ENST00000468117 C5orf52A6NGY3 159 aa15.18■□□□□ 0.02
TMEM53-207ENST00000468117 BEAN1Q3B7T3 259 aa15.18■□□□□ 0.02
TMEM53-207ENST00000468117 H3BVH4 76 aa15.17■□□□□ 0.02
TMEM53-207ENST00000468117 GNRH2O43555 120 aa15.17■□□□□ 0.02
TMEM53-207ENST00000468117 NTF3P20783 257 aa15.17■□□□□ 0.02
TMEM53-207ENST00000468117 FAM159AQ6UWV7 190 aa15.17■□□□□ 0.02
TMEM53-207ENST00000468117 COL6A5A8TX70 2615 aa15.16■□□□□ 0.02
TMEM53-207ENST00000468117 F2Z2F3 143 aa15.16■□□□□ 0.02
TMEM53-207ENST00000468117 WFDC10AQ9H1F0 79 aa15.16■□□□□ 0.02
TMEM53-207ENST00000468117 A0A1B0GW15 77 aa15.16■□□□□ 0.02
TMEM53-207ENST00000468117 CRXO43186 299 aaPredicted RBP15.16■□□□□ 0.02
TMEM53-207ENST00000468117 TWIST1Q15672 202 aa15.16■□□□□ 0.02
TMEM53-207ENST00000468117 STHQ8IWL8 128 aa15.16■□□□□ 0.02
TMEM53-207ENST00000468117 CNFNQ9BYD5 112 aa15.16■□□□□ 0.02
TMEM53-207ENST00000468117 MSRB1Q9NZV6 116 aa15.16■□□□□ 0.02
TMEM53-207ENST00000468117 TIMM8BQ9Y5J9 83 aaPredicted RBP15.16■□□□□ 0.02
TMEM53-207ENST00000468117 C9orf66Q5T8R8 295 aa15.15■□□□□ 0.02
TMEM53-207ENST00000468117 OR10AG1Q8NH19 301 aa15.15■□□□□ 0.02
TMEM53-207ENST00000468117 S100A8P05109 93 aa15.14■□□□□ 0.01
TMEM53-207ENST00000468117 S100A4P26447 101 aaKnown RBP15.14■□□□□ 0.01
TMEM53-207ENST00000468117 ASIPP42127 132 aa15.14■□□□□ 0.01
TMEM53-207ENST00000468117 INSL3P51460 131 aa15.14■□□□□ 0.01
TMEM53-207ENST00000468117 C19orf73Q9NVV2 129 aa15.14■□□□□ 0.01
TMEM53-207ENST00000468117 MUC4Q99102 2169 aa15.14■□□□□ 0.01
TMEM53-207ENST00000468117 OR5AL1P0C617 328 aa15.14■□□□□ 0.01
TMEM53-207ENST00000468117 RBMY1A1P0DJD3 496 aaKnown RBP15.14■□□□□ 0.01
TMEM53-207ENST00000468117 RBMY1CP0DJD4 496 aa15.14■□□□□ 0.01
TMEM53-207ENST00000468117 CMC4P56277 68 aaPredicted RBP15.14■□□□□ 0.01
TMEM53-207ENST00000468117 RBMY1FQ15415 496 aaKnown RBP15.14■□□□□ 0.01
TMEM53-207ENST00000468117 ZNF747Q9BV97 191 aa15.14■□□□□ 0.01
TMEM53-207ENST00000468117 SPRY2O43597 315 aa15.13■□□□□ 0.01
TMEM53-207ENST00000468117 SNAI2O43623 268 aa15.13■□□□□ 0.01
TMEM53-207ENST00000468117 SRIP30626 198 aa15.13■□□□□ 0.01
TMEM53-207ENST00000468117 C3orf56Q8N813 242 aa15.13■□□□□ 0.01
TMEM53-207ENST00000468117 KCNS1Q96KK3 526 aa15.13■□□□□ 0.01
TMEM53-207ENST00000468117 TRPT1Q86TN4 253 aaKnown RBP15.12■□□□□ 0.01
TMEM53-207ENST00000468117 GATD1Q8NB37 220 aa15.12■□□□□ 0.01
TMEM53-207ENST00000468117 FAM110AQ9BQ89 295 aa15.12■□□□□ 0.01
TMEM53-207ENST00000468117 TP53TG3Q9ULZ0 132 aa15.12■□□□□ 0.01
TMEM53-207ENST00000468117 RNASE3P12724 160 aaKnown RBP15.12■□□□□ 0.01
TMEM53-207ENST00000468117 TDRG1Q3Y452 100 aa15.12■□□□□ 0.01
TMEM53-207ENST00000468117 ZNF493Q6ZR52 646 aa15.12■□□□□ 0.01
TMEM53-207ENST00000468117 CLUHP3Q96NS8 147 aa15.12■□□□□ 0.01
TMEM53-207ENST00000468117 UBE2CO00762 179 aa15.11■□□□□ 0.01
TMEM53-207ENST00000468117 IGHV1OR15-1A0A075B7D0 117 aa15.1■□□□□ 0.01
TMEM53-207ENST00000468117 LOC102724200A0A096LPH7 203 aaPredicted RBP15.1■□□□□ 0.01
TMEM53-207ENST00000468117 HOXA5P20719 270 aa15.1■□□□□ 0.01
TMEM53-207ENST00000468117 PDZD11Q5EBL8 140 aa15.1■□□□□ 0.01
TMEM53-207ENST00000468117 DNLZQ5SXM8 178 aa15.1■□□□□ 0.01
TMEM53-207ENST00000468117 SPANXN1Q5VSR9 72 aa15.1■□□□□ 0.01
TMEM53-207ENST00000468117 Q8N1Y9 231 aa15.1■□□□□ 0.01
TMEM53-207ENST00000468117 WFDC9Q8NEX5 89 aa15.09■□□□□ 0.01
TMEM53-207ENST00000468117 XCL2Q9UBD3 114 aa15.09■□□□□ 0.01
TMEM53-207ENST00000468117 PKD1L1Q8TDX9 2849 aa15.09■□□□□ 0.01
TMEM53-207ENST00000468117 COA6Q5JTJ3 125 aaKnown RBP15.09■□□□□ 0.01
TMEM53-207ENST00000468117 AMN1Q8IY45 258 aa15.09■□□□□ 0.01
TMEM53-207ENST00000468117 ALKBH7Q9BT30 221 aaPredicted RBP15.09■□□□□ 0.01
TMEM53-207ENST00000468117 SCRT2Q9NQ03 307 aa15.09■□□□□ 0.01
TMEM53-207ENST00000468117 PHLDA3Q9Y5J5 127 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms