RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 APOC4P55056 127 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 FOXA3P55318 350 aaPredicted RBP12.11□□□□□ -0.47
LINC00963-208ENST00000454968 IMMP2LQ96T52 175 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 PYGO2Q9BRQ0 406 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 GFRA4Q9GZZ7 299 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 TUBA4BQ9H853 241 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 SMIM27A0A1W2PRY6 76 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 CXorf65A6NEN9 183 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 ZNF705GA8MUZ8 300 aaPredicted RBP12.11□□□□□ -0.47
LINC00963-208ENST00000454968 H7BYZ3 331 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 K7EIL1 84 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 CA1P00915 261 aaPredicted RBP12.11□□□□□ -0.47
LINC00963-208ENST00000454968 RPS20P60866 119 aaKnown RBP12.11□□□□□ -0.47
LINC00963-208ENST00000454968 OR2D3Q8NGH3 330 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 TSKUQ8WUA8 353 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 RPS10P5Q9NQ39 176 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 TP53TG3Q9ULZ0 132 aa12.11□□□□□ -0.47
LINC00963-208ENST00000454968 TMEM189A5PLL7 270 aa12.1□□□□□ -0.47
LINC00963-208ENST00000454968 A8MWL6 223 aa12.1□□□□□ -0.47
LINC00963-208ENST00000454968 RPL19P84098 196 aaKnown RBP12.1□□□□□ -0.47
LINC00963-208ENST00000454968 ANXA2RQ3ZCQ2 193 aa12.1□□□□□ -0.47
LINC00963-208ENST00000454968 KCNS1Q96KK3 526 aa12.1□□□□□ -0.47
LINC00963-208ENST00000454968 IL36BQ9NZH7 164 aa12.1□□□□□ -0.47
LINC00963-208ENST00000454968 IGHV1OR15-1A0A075B7D0 117 aa12.09□□□□□ -0.47
LINC00963-208ENST00000454968 ORM1P02763 201 aa12.09□□□□□ -0.47
LINC00963-208ENST00000454968 IGLC6P0CF74 106 aa12.09□□□□□ -0.47
LINC00963-208ENST00000454968 GTSF1Q8WW33 167 aa12.09□□□□□ -0.47
LINC00963-208ENST00000454968 SSBP4Q9BWG4 385 aaPredicted RBP12.09□□□□□ -0.47
LINC00963-208ENST00000454968 FRMD6-AS1P0C7T7 363 aa12.08□□□□□ -0.48
LINC00963-208ENST00000454968 FAM159AQ6UWV7 190 aa12.08□□□□□ -0.48
LINC00963-208ENST00000454968 Q6ZWC4 215 aa12.08□□□□□ -0.48
LINC00963-208ENST00000454968 YPEL4Q96NS1 127 aa12.08□□□□□ -0.48
LINC00963-208ENST00000454968 XKRY2A2RUG3 117 aa12.07□□□□□ -0.48
LINC00963-208ENST00000454968 TYMSP04818 313 aa12.07□□□□□ -0.48
LINC00963-208ENST00000454968 MED14OSP0DP75 135 aa12.07□□□□□ -0.48
LINC00963-208ENST00000454968 MUC21Q5SSG8 566 aa12.07□□□□□ -0.48
LINC00963-208ENST00000454968 NEU1Q99519 415 aa12.07□□□□□ -0.48
LINC00963-208ENST00000454968 GOLT1BQ9Y3E0 138 aa12.07□□□□□ -0.48
LINC00963-208ENST00000454968 MUC4Q99102 2169 aa12.07□□□□□ -0.48
LINC00963-208ENST00000454968 SNAI2O43623 268 aa12.06□□□□□ -0.48
LINC00963-208ENST00000454968 CNFNQ9BYD5 112 aa12.06□□□□□ -0.48
LINC00963-208ENST00000454968 SCRT2Q9NQ03 307 aa12.06□□□□□ -0.48
LINC00963-208ENST00000454968 IGHV3-16A0A0C4DH30 117 aa12.05□□□□□ -0.48
LINC00963-208ENST00000454968 A0A1W2PPQ1 181 aa12.05□□□□□ -0.48
LINC00963-208ENST00000454968 OR5AL1P0C617 328 aa12.05□□□□□ -0.48
LINC00963-208ENST00000454968 GZMBP10144 247 aa12.05□□□□□ -0.48
LINC00963-208ENST00000454968 RNASE3P12724 160 aaKnown RBP12.05□□□□□ -0.48
LINC00963-208ENST00000454968 CTRLP40313 264 aa12.05□□□□□ -0.48
LINC00963-208ENST00000454968 SMCO4Q9NRQ5 59 aa12.05□□□□□ -0.48
LINC00963-208ENST00000454968 TRAV9-1A0A075B6T8 112 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 HIGD1CA8MV81 97 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 GNRH2O43555 120 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 PRB2P02812 416 aaPredicted RBP12.04□□□□□ -0.48
LINC00963-208ENST00000454968 C11orf72Q8NBR9 251 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 IL17DQ8TAD2 202 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 RNF183Q96D59 192 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 C9orf85Q96MD7 179 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 LINC01587Q99440 93 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 NAT8BQ9UHF3 227 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 NAGKQ9UJ70 344 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 TP53TG1Q9Y2A0 90 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 DNAH9Q9NYC9 4486 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 MEGF8Q7Z7M0 2845 aa12.04□□□□□ -0.48
LINC00963-208ENST00000454968 TRGV11A0A075B6L2 103 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 TMSB15BA0A087X1C1 80 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 NUP35Q8NFH5 326 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 RNASE8Q8TDE3 154 aaKnown RBP12.03□□□□□ -0.48
LINC00963-208ENST00000454968 X6R8D5 127 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 GRIFINA4D1Z8 144 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 SMIM9A6NGZ8 99 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 SCO1O75880 301 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 ASIPP42127 132 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 ELOBQ15370 118 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 WDR73Q6P4I2 378 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 TMEM88Q6PEY1 159 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 CBLN2Q8IUK8 224 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 FER1L6-AS1Q8NA97 138 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 MDFICQ9P1T7 246 aa12.03□□□□□ -0.48
LINC00963-208ENST00000454968 HUWE1Q7Z6Z7 4374 aaKnown RBP12.02□□□□□ -0.49
LINC00963-208ENST00000454968 TRBV24-1A0A075B6N3 115 aa12.02□□□□□ -0.49
LINC00963-208ENST00000454968 IGHV4-4A0A075B6R2 117 aa12.02□□□□□ -0.49
LINC00963-208ENST00000454968 PLAC8L1A1L4L8 177 aa12.02□□□□□ -0.49
LINC00963-208ENST00000454968 F2Z2F3 143 aa12.02□□□□□ -0.49
LINC00963-208ENST00000454968 SPRY2O43597 315 aa12.02□□□□□ -0.49
LINC00963-208ENST00000454968 DEFB135Q30KP9 77 aa12.02□□□□□ -0.49
LINC00963-208ENST00000454968 ZNF493Q6ZR52 646 aa12.02□□□□□ -0.49
LINC00963-208ENST00000454968 TMEM263Q8WUH6 116 aaKnown RBP12.02□□□□□ -0.49
LINC00963-208ENST00000454968 TMEM208Q9BTX3 173 aa12.02□□□□□ -0.49
LINC00963-208ENST00000454968 PRKDCP78527 4128 aaKnown RBP12.01□□□□□ -0.49
LINC00963-208ENST00000454968 TENM3Q9P273 2699 aa12.01□□□□□ -0.49
LINC00963-208ENST00000454968 CBY3A6NI87 242 aa12.01□□□□□ -0.49
LINC00963-208ENST00000454968 NXPH4O95158 308 aa12.01□□□□□ -0.49
LINC00963-208ENST00000454968 PRM2P04554 102 aa12.01□□□□□ -0.49
LINC00963-208ENST00000454968 ARMS2P0C7Q2 107 aa12.01□□□□□ -0.49
LINC00963-208ENST00000454968 AZU1P20160 251 aa12.01□□□□□ -0.49
LINC00963-208ENST00000454968 FAM3BP58499 235 aaPredicted RBP12.01□□□□□ -0.49
LINC00963-208ENST00000454968 KCNIP4Q6PIL6 250 aa12.01□□□□□ -0.49
LINC00963-208ENST00000454968 PTH2Q96A98 100 aa12.01□□□□□ -0.49
LINC00963-208ENST00000454968 RCHY1Q96PM5 261 aa12.01□□□□□ -0.49
LINC00963-208ENST00000454968 TCL1AP56279 114 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms