RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 LINC01587Q99440 93 aa10.66□□□□□ -0.7
TNF-208ENST00000449264 H7BYZ3 331 aa10.66□□□□□ -0.7
TNF-208ENST00000449264 LINC01559Q495D7 138 aa10.66□□□□□ -0.7
TNF-208ENST00000449264 DEFB121Q5J5C9 76 aa10.66□□□□□ -0.7
TNF-208ENST00000449264 C1orf158Q8N1D5 194 aa10.66□□□□□ -0.7
TNF-208ENST00000449264 GOLT1BQ9Y3E0 138 aa10.66□□□□□ -0.7
TNF-208ENST00000449264 V9GYV3 84 aa10.66□□□□□ -0.7
TNF-208ENST00000449264 IGHV1OR15-1A0A075B7D0 117 aa10.65□□□□□ -0.7
TNF-208ENST00000449264 IGKV3D-20A0A0C4DH25 116 aa10.65□□□□□ -0.7
TNF-208ENST00000449264 GZMBP10144 247 aa10.65□□□□□ -0.7
TNF-208ENST00000449264 CSNK1G2-AS1Q8NCQ2 148 aa10.65□□□□□ -0.7
TNF-208ENST00000449264 ANAPC16Q96DE5 110 aa10.65□□□□□ -0.7
TNF-208ENST00000449264 C20orf144Q9BQM9 153 aa10.65□□□□□ -0.7
TNF-208ENST00000449264 GRIFINA4D1Z8 144 aa10.64□□□□□ -0.71
TNF-208ENST00000449264 CBY3A6NI87 242 aa10.64□□□□□ -0.71
TNF-208ENST00000449264 PPP1R2P9O14990 202 aa10.64□□□□□ -0.71
TNF-208ENST00000449264 PRM2P04554 102 aa10.64□□□□□ -0.71
TNF-208ENST00000449264 TCL1AP56279 114 aa10.63□□□□□ -0.71
TNF-208ENST00000449264 TMEM256Q8N2U0 113 aa10.63□□□□□ -0.71
TNF-208ENST00000449264 PYGO2Q9BRQ0 406 aa10.63□□□□□ -0.71
TNF-208ENST00000449264 TP53TG3Q9ULZ0 132 aa10.63□□□□□ -0.71
TNF-208ENST00000449264 UBE2CO00762 179 aa10.63□□□□□ -0.71
TNF-208ENST00000449264 TYMSP04818 313 aa10.63□□□□□ -0.71
TNF-208ENST00000449264 KCNS1Q96KK3 526 aa10.63□□□□□ -0.71
TNF-208ENST00000449264 TPPP3Q9BW30 176 aa10.63□□□□□ -0.71
TNF-208ENST00000449264 CTDSP1Q9GZU7 261 aa10.63□□□□□ -0.71
TNF-208ENST00000449264 A0A087WWC5 75 aa10.62□□□□□ -0.71
TNF-208ENST00000449264 XKRY2A2RUG3 117 aa10.62□□□□□ -0.71
TNF-208ENST00000449264 GNRH2O43555 120 aa10.62□□□□□ -0.71
TNF-208ENST00000449264 CT83Q5H943 113 aa10.62□□□□□ -0.71
TNF-208ENST00000449264 MRAPQ8TCY5 172 aa10.62□□□□□ -0.71
TNF-208ENST00000449264 RCHY1Q96PM5 261 aa10.62□□□□□ -0.71
TNF-208ENST00000449264 TIMM8BQ9Y5J9 83 aaPredicted RBP10.62□□□□□ -0.71
TNF-208ENST00000449264 A8MWL6 223 aa10.61□□□□□ -0.71
TNF-208ENST00000449264 SCO1O75880 301 aa10.61□□□□□ -0.71
TNF-208ENST00000449264 S100A4P26447 101 aaKnown RBP10.61□□□□□ -0.71
TNF-208ENST00000449264 RPS20P60866 119 aaKnown RBP10.61□□□□□ -0.71
TNF-208ENST00000449264 TDRG1Q3Y452 100 aa10.61□□□□□ -0.71
TNF-208ENST00000449264 ZNF705AQ6ZN79 300 aaPredicted RBP10.61□□□□□ -0.71
TNF-208ENST00000449264 TSKUQ8WUA8 353 aa10.61□□□□□ -0.71
TNF-208ENST00000449264 H3BVH4 76 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 ASIPP42127 132 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 NEU1Q99519 415 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 RETNQ9HD89 108 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 IL36BQ9NZH7 164 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 TRGV11A0A075B6L2 103 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 TMEM88Q6PEY1 159 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 Q6ZWC4 215 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 ZNF575Q86XF7 245 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 CBLN2Q8IUK8 224 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 GTSF1Q8WW33 167 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 URGCP-MRPS24S4R325 110 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 MEGF8Q7Z7M0 2845 aa10.6□□□□□ -0.71
TNF-208ENST00000449264 HIGD1CA8MV81 97 aa10.59□□□□□ -0.71
TNF-208ENST00000449264 AZU1P20160 251 aa10.59□□□□□ -0.71
TNF-208ENST00000449264 RRN3P1Q2M238 152 aa10.59□□□□□ -0.71
TNF-208ENST00000449264 FER1L6-AS1Q8NA97 138 aa10.59□□□□□ -0.71
TNF-208ENST00000449264 OR11H2Q8NH07 326 aa10.59□□□□□ -0.71
TNF-208ENST00000449264 RNF183Q96D59 192 aa10.59□□□□□ -0.71
TNF-208ENST00000449264 TMEM242Q9NWH2 141 aa10.59□□□□□ -0.71
TNF-208ENST00000449264 MDFICQ9P1T7 246 aa10.59□□□□□ -0.71
TNF-208ENST00000449264 IGHV3-16A0A0C4DH30 117 aa10.58□□□□□ -0.72
TNF-208ENST00000449264 MUC21A0A0G2JKD1 596 aa10.58□□□□□ -0.72
TNF-208ENST00000449264 MUC21A0A140T8X8 626 aa10.58□□□□□ -0.72
TNF-208ENST00000449264 SMIM27A0A1W2PRY6 76 aa10.58□□□□□ -0.72
TNF-208ENST00000449264 SPRY2O43597 315 aa10.58□□□□□ -0.72
TNF-208ENST00000449264 FAM3BP58499 235 aaPredicted RBP10.58□□□□□ -0.72
TNF-208ENST00000449264 SSTP61278 116 aa10.58□□□□□ -0.72
TNF-208ENST00000449264 DEFA6Q01524 100 aa10.58□□□□□ -0.72
TNF-208ENST00000449264 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
TNF-208ENST00000449264 PGLYRP4Q96LB8 373 aa10.58□□□□□ -0.72
TNF-208ENST00000449264 LINC00467Q9BRT7 94 aa10.58□□□□□ -0.72
TNF-208ENST00000449264 CXCL1P09341 107 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 ARMS2P0C7Q2 107 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 ZNF415Q09FC8 603 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 KCNIP4Q6PIL6 250 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 GFRA4Q9GZZ7 299 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 NAT8BQ9UHF3 227 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 X6R8D5 127 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 TENM3Q9P273 2699 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 A0A1W2PPQ1 181 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 SPINK4O60575 86 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 IGLC6P0CF74 106 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
TNF-208ENST00000449264 S100PP25815 95 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 LYZL1Q6UWQ5 148 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 NUP35Q8NFH5 326 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 RNASE8Q8TDE3 154 aaKnown RBP10.57□□□□□ -0.72
TNF-208ENST00000449264 TMEM263Q8WUH6 116 aaKnown RBP10.57□□□□□ -0.72
TNF-208ENST00000449264 GSN-AS1Q9NRJ2 163 aa10.57□□□□□ -0.72
TNF-208ENST00000449264 MUC4Q99102 2169 aa10.56□□□□□ -0.72
TNF-208ENST00000449264 C16orf74Q96GX8 76 aa10.56□□□□□ -0.72
TNF-208ENST00000449264 OVOL2Q9BRP0 275 aa10.56□□□□□ -0.72
TNF-208ENST00000449264 SMCO4Q9NRQ5 59 aa10.56□□□□□ -0.72
TNF-208ENST00000449264 FAM231BA6NCW3 169 aa10.55□□□□□ -0.72
TNF-208ENST00000449264 EMP1P54849 157 aa10.55□□□□□ -0.72
TNF-208ENST00000449264 C11orf72Q8NBR9 251 aa10.55□□□□□ -0.72
TNF-208ENST00000449264 OR10AG1Q8NH19 301 aa10.55□□□□□ -0.72
TNF-208ENST00000449264 IMMP2LQ96T52 175 aa10.55□□□□□ -0.72
TNF-208ENST00000449264 PHLDA3Q9Y5J5 127 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms