RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 TM2D2Q9BX73 214 aa6.3□□□□□ -1.4
LINC00954-202ENST00000449086 HECTD1Q9ULT8 2610 aa6.3□□□□□ -1.4
LINC00954-202ENST00000449086 TRAV26-2A0A0B4J265 109 aa6.3□□□□□ -1.4
LINC00954-202ENST00000449086 B4DSR2 109 aa6.3□□□□□ -1.4
LINC00954-202ENST00000449086 RNF223E7ERA6 249 aa6.3□□□□□ -1.4
LINC00954-202ENST00000449086 IGHV3-23P01764 117 aa6.3□□□□□ -1.4
LINC00954-202ENST00000449086 COX7A1P24310 79 aa6.3□□□□□ -1.4
LINC00954-202ENST00000449086 RRN3P1Q2M238 152 aa6.3□□□□□ -1.4
LINC00954-202ENST00000449086 LINC01356Q8N9X3 169 aa6.3□□□□□ -1.4
LINC00954-202ENST00000449086 SS18L2Q9UHA2 77 aa6.3□□□□□ -1.4
LINC00954-202ENST00000449086 NBPF19A0A087WUL8 3843 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 ZNF80P51504 273 aaPredicted RBP6.29□□□□□ -1.4
LINC00954-202ENST00000449086 FOXI1Q12951 378 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 SCGB1D4Q6XE38 83 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 C8orf86Q6ZUL3 223 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 ZNF48Q96MX3 618 aaPredicted RBP6.29□□□□□ -1.4
LINC00954-202ENST00000449086 SHANK2-AS3Q9BTD1 123 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 TMEM14CQ9P0S9 112 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 CTSZQ9UBR2 303 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 SIGLEC9Q9Y336 463 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 U3KQK5 164 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 ANKRD17O75179 2603 aaKnown RBP6.29□□□□□ -1.4
LINC00954-202ENST00000449086 CELSR2Q9HCU4 2923 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 HLA-DMBP28068 263 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 PAX8Q06710 450 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 TCTEX1D4Q5JR98 221 aa6.29□□□□□ -1.4
LINC00954-202ENST00000449086 TMEM238LA0A1B0GVL6 79 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 OR11H12B2RN74 326 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 J3QLI3 93 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 HOXA3O43365 443 aaPredicted RBP6.28□□□□□ -1.4
LINC00954-202ENST00000449086 IGHV4-31P0DP07 118 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 SRSF9Q13242 221 aaKnown RBP eCLIP6.28□□□□□ -1.4
LINC00954-202ENST00000449086 ANXA2RQ3ZCQ2 193 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 TEX29Q8N6K0 151 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 LY6G5BQ8NDX9 201 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 OR11H1Q8NG94 326 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 OR11H2Q8NH07 326 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 ZNF502Q8TBZ5 544 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 NXT2Q9NPJ8 142 aaKnown RBP6.28□□□□□ -1.4
LINC00954-202ENST00000449086 LINC01549A6NIU2 74 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 MSMBP08118 114 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 HOXB4P17483 251 aaPredicted RBP6.28□□□□□ -1.4
LINC00954-202ENST00000449086 ZNF491Q8N8L2 437 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 GATD1Q8NB37 220 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 RNF183Q96D59 192 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 PRR25Q96S07 402 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 AKAP6Q13023 2319 aa6.28□□□□□ -1.4
LINC00954-202ENST00000449086 CYSRT1A8MQ03 144 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 ATP5LO75964 103 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 MRGPRG-AS1Q2M3A8 158 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 TMEM30BQ3MIR4 351 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 DEFB104AQ8WTQ1 72 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 ANAPC13Q9BS18 74 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 LINC00574Q9H8X3 128 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 H3BRN7 92 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 XGP55808 180 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 C1orf122Q6ZSJ8 110 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 ARHGAP32A7KAX9 2087 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 I3L2K1 104 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 ERCC8Q13216 396 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 ZFP2Q6ZN57 461 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 NFE4Q86UQ8 179 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 RNF185Q96GF1 192 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 C1QTNF4Q9BXJ3 329 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 CRYBG3Q68DQ2 2970 aa6.27□□□□□ -1.41
LINC00954-202ENST00000449086 VPS13CQ709C8 3753 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 IGHV3OR16-13A0A075B7E8 117 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 IGHV3-74A0A0B4J1X5 117 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 TEX22C9J3V5 150 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 M0R1W7 72 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 TRGV3P03979 118 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 HLA-DRB4P13762 266 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 DLX4Q92988 240 aaPredicted RBP6.26□□□□□ -1.41
LINC00954-202ENST00000449086 HLA-DRB4X5D2U9 266 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 NAV2Q8IVL1 2488 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 CR1P17927 2039 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 PRSS29PA6NIE9 313 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 LINC01548A6NM66 108 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 B5MCH6 92 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 J3KRW8 73 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 IGHV1-8P0DP01 117 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 ZFP36P26651 326 aaKnown RBP6.26□□□□□ -1.41
LINC00954-202ENST00000449086 HES1Q14469 280 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 Q6ZUT4 128 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 LYPD1Q8N2G4 141 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 ZMAT4Q9H898 229 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 PRO0461Q9UI25 63 aa6.26□□□□□ -1.41
LINC00954-202ENST00000449086 IGHV3-66A0A0C4DH42 116 aa6.25□□□□□ -1.41
LINC00954-202ENST00000449086 SCGB1C2P0DMR2 95 aa6.25□□□□□ -1.41
LINC00954-202ENST00000449086 LAGE3Q14657 143 aa6.25□□□□□ -1.41
LINC00954-202ENST00000449086 CDIP1Q9H305 208 aa6.25□□□□□ -1.41
LINC00954-202ENST00000449086 TRBV6-1A0A0K0K1D8 114 aa6.25□□□□□ -1.41
LINC00954-202ENST00000449086 K7EIM0 57 aa6.25□□□□□ -1.41
LINC00954-202ENST00000449086 SPRY2O43597 315 aa6.25□□□□□ -1.41
LINC00954-202ENST00000449086 KRTAP1-1Q07627 177 aa6.25□□□□□ -1.41
LINC00954-202ENST00000449086 FHL3Q13643 280 aa6.25□□□□□ -1.41
LINC00954-202ENST00000449086 PSMG4Q5JS54 123 aa6.25□□□□□ -1.41
LINC00954-202ENST00000449086 HIF1ANQ9NWT6 349 aa6.25□□□□□ -1.41
LINC00954-202ENST00000449086 ABCA12Q86UK0 2595 aa6.25□□□□□ -1.41
LINC00954-202ENST00000449086 IGHV1-3A0A0C4DH29 117 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms