RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TRBV25-1A0A075B6N4 114 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 IGKV2-24A0A0C4DH68 120 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 LGALS3P17931 250 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 ZNF79Q15937 498 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 DNLZQ5SXM8 178 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 ZNF493Q6ZR52 646 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 Q6ZS49 121 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 ZNRF2Q8NHG8 242 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 CST9LQ9H4G1 147 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 SMDT1Q9H4I9 107 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 NCR2O95944 276 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 ALKAL2Q6UX46 152 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 LYPD6Q86Y78 171 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 KLK9Q9UKQ9 250 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 C7orf66A4D0T2 115 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 IGLV2-11P01706 119 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 CD74P04233 296 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 MIFP14174 115 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 PAPPA-AS1Q5QFB9 102 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 RASL11AQ6T310 242 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 TMEM61Q8N0U2 210 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 TSKUQ8WUA8 353 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 FLNAP21333 2647 aaKnown RBP4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 SPINK4O60575 86 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 C16orf95Q9H693 158 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 EGR2P11161 476 aaPredicted RBP4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 ZNF134P52741 427 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 RNF182Q8N6D2 247 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 RS1O15537 224 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 TRACP01848 142 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 C6orf226Q5I0X4 101 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 FOXI2Q6ZQN5 318 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 LYPD6BQ8NI32 183 aa4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 NHP2Q9NX24 153 aaKnown RBP4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 RANBP2P49792 3224 aaKnown RBP4.36□□□□□ -1.71
CDC42BPA-209ENST00000448940 K7ERS5 55 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 SIVA1O15304 175 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 LINC00205P59089 165 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 CYB561D1Q8N8Q1 229 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 OR5AC2Q9NZP5 309 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 SMIM20Q8N5G0 67 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 C20orf173Q96LM9 149 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 B9D2Q9BPU9 175 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 SSBP4Q9BWG4 385 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 COL6A5A8TX70 2615 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 FABP5P3A8MUU1 101 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 INS-IGF2F8WCM5 200 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 ERCC8Q13216 396 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 RPP25LQ8N5L8 163 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 SLIRPQ9GZT3 109 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 HHLA3Q9XRX5 114 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 TNRC6BQ9UPQ9 1833 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 IGKV1D-8A0A087WSZ0 117 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 TRAV26-1A0A087WT03 109 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 J3QRE1 110 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 KRTAP27-1Q3LI81 207 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 HIST1H4GQ99525 98 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 A0A0A6YYD4 124 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 PMS2P5A8MQ11 134 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 PAGE4O60829 102 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 ZNF138P52744 262 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 SEC11AP67812 179 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 ZNF876PQ49A33 203 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 LINC00337Q8N6G1 96 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 HIST1H2BAQ96A08 127 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 TMEM126AQ9H061 195 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 MIXL1Q9H2W2 232 aa4.35□□□□□ -1.71
CDC42BPA-209ENST00000448940 K7EMT4 169 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 PROP1O75360 226 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 IGKV1-39P01597 117 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 IGKV1D-39P04432 117 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 GAGE2AQ6NT46 116 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 PRELID3AQ96N28 172 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 COL4A2P08572 1712 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 HMSDA8MTL9 139 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 RNASE2P10153 161 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 CKS2P33552 79 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 NDUFA4L2Q9NRX3 87 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 MRPL16Q9NX20 251 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 H3BRM9 83 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 CSN3P07498 182 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 BSXQ3C1V8 233 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 OTORQ9NRC9 128 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 IGLV3-1P01715 115 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 PROK1P58294 105 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 UBE2D3P61077 147 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 RHOHQ15669 191 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 JPT2Q9H910 190 aa4.34□□□□□ -1.71
CDC42BPA-209ENST00000448940 OCIAD2Q56VL3 154 aa4.34□□□□□ -1.72
CDC42BPA-209ENST00000448940 Q9H3A6 140 aa4.34□□□□□ -1.72
CDC42BPA-209ENST00000448940 ZNF581Q9P0T4 197 aa4.34□□□□□ -1.72
CDC42BPA-209ENST00000448940 C7orf71A4D174 169 aa4.34□□□□□ -1.72
CDC42BPA-209ENST00000448940 SCRT1Q9BWW7 348 aa4.34□□□□□ -1.72
CDC42BPA-209ENST00000448940 A0A087WWL8 130 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 A0A0U1RQV1 116 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 FAM222AQ5U5X8 452 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 KLF12Q9Y4X4 402 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 LECT2O14960 151 aa4.33□□□□□ -1.72
CDC42BPA-209ENST00000448940 NDUFA3O95167 84 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms