RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 CXCL1P09341 107 aa8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 CD7P09564 240 aa8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 CDKN1BP46527 198 aa8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 RPS20P60866 119 aaKnown RBP8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 GTSCR1Q86UQ5 136 aa8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 TSKUQ8WUA8 353 aa8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 GFRA4Q9GZZ7 299 aa8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 ZMAT5Q9UDW3 170 aaKnown RBP8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 HUWE1Q7Z6Z7 4374 aaKnown RBP8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 STARD9Q9P2P6 4700 aa8.62□□□□□ -1.03
AC009404.1-202ENST00000439955 SMIM27A0A1W2PRY6 76 aa8.62□□□□□ -1.03
AC009404.1-202ENST00000439955 C7orf71A4D174 169 aa8.62□□□□□ -1.03
AC009404.1-202ENST00000439955 PRR9Q5T870 116 aa8.62□□□□□ -1.03
AC009404.1-202ENST00000439955 TRPT1Q86TN4 253 aaKnown RBP8.62□□□□□ -1.03
AC009404.1-202ENST00000439955 STHQ8IWL8 128 aa8.62□□□□□ -1.03
AC009404.1-202ENST00000439955 OR2D3Q8NGH3 330 aa8.62□□□□□ -1.03
AC009404.1-202ENST00000439955 YPEL4Q96NS1 127 aa8.62□□□□□ -1.03
AC009404.1-202ENST00000439955 C20orf144Q9BQM9 153 aa8.62□□□□□ -1.03
AC009404.1-202ENST00000439955 HERC2O95714 4834 aa8.62□□□□□ -1.03
AC009404.1-202ENST00000439955 TRBV24-1A0A075B6N3 115 aa8.61□□□□□ -1.03
AC009404.1-202ENST00000439955 NUTF2P61970 127 aaKnown RBP8.61□□□□□ -1.03
AC009404.1-202ENST00000439955 RPL19P84098 196 aaKnown RBP8.61□□□□□ -1.03
AC009404.1-202ENST00000439955 ELOBQ15370 118 aa8.61□□□□□ -1.03
AC009404.1-202ENST00000439955 ZNF124Q15973 351 aa8.61□□□□□ -1.03
AC009404.1-202ENST00000439955 PYGO2Q9BRQ0 406 aa8.61□□□□□ -1.03
AC009404.1-202ENST00000439955 NAT8BQ9UHF3 227 aa8.61□□□□□ -1.03
AC009404.1-202ENST00000439955 CSMD3Q7Z407 3707 aa8.61□□□□□ -1.03
AC009404.1-202ENST00000439955 TMEM189A5PLL7 270 aa8.6□□□□□ -1.03
AC009404.1-202ENST00000439955 RBMY1BA6NDE4 496 aaKnown RBP8.6□□□□□ -1.03
AC009404.1-202ENST00000439955 RBMY1EA6NEQ0 496 aaKnown RBP8.6□□□□□ -1.03
AC009404.1-202ENST00000439955 IGKV3-20P01619 116 aa8.6□□□□□ -1.03
AC009404.1-202ENST00000439955 RBMY1DP0C7P1 496 aaKnown RBP8.6□□□□□ -1.03
AC009404.1-202ENST00000439955 FOXA3P55318 350 aaPredicted RBP8.6□□□□□ -1.03
AC009404.1-202ENST00000439955 GFI1BQ5VTD9 330 aa8.6□□□□□ -1.03
AC009404.1-202ENST00000439955 MORN3Q6PF18 240 aaPredicted RBP8.6□□□□□ -1.03
AC009404.1-202ENST00000439955 SBSPONQ8IVN8 264 aa8.6□□□□□ -1.03
AC009404.1-202ENST00000439955 COLCA2A8K830 154 aa8.59□□□□□ -1.03
AC009404.1-202ENST00000439955 M0R2Z0 102 aa8.59□□□□□ -1.03
AC009404.1-202ENST00000439955 ZNF324O75467 553 aaPredicted RBP8.59□□□□□ -1.03
AC009404.1-202ENST00000439955 CA1P00915 261 aaPredicted RBP8.59□□□□□ -1.03
AC009404.1-202ENST00000439955 ORM1P02763 201 aa8.59□□□□□ -1.03
AC009404.1-202ENST00000439955 TYMSP04818 313 aa8.59□□□□□ -1.03
AC009404.1-202ENST00000439955 RNASE4P34096 147 aaKnown RBP8.59□□□□□ -1.03
AC009404.1-202ENST00000439955 SPINK13Q1W4C9 94 aa8.59□□□□□ -1.03
AC009404.1-202ENST00000439955 KCNS1Q96KK3 526 aa8.59□□□□□ -1.03
AC009404.1-202ENST00000439955 NEU1Q99519 415 aa8.59□□□□□ -1.03
AC009404.1-202ENST00000439955 URGCP-MRPS24S4R325 110 aa8.59□□□□□ -1.03
AC009404.1-202ENST00000439955 IGKV3D-20A0A0C4DH25 116 aa8.58□□□□□ -1.04
AC009404.1-202ENST00000439955 A0A1W2PPQ1 181 aa8.58□□□□□ -1.04
AC009404.1-202ENST00000439955 HIGD1CA8MV81 97 aa8.58□□□□□ -1.04
AC009404.1-202ENST00000439955 J3KRW8 73 aa8.58□□□□□ -1.04
AC009404.1-202ENST00000439955 CRXO43186 299 aaPredicted RBP8.58□□□□□ -1.04
AC009404.1-202ENST00000439955 FAM3BP58499 235 aaPredicted RBP8.58□□□□□ -1.04
AC009404.1-202ENST00000439955 TDRG1Q3Y452 100 aa8.58□□□□□ -1.04
AC009404.1-202ENST00000439955 DNLZQ5SXM8 178 aa8.58□□□□□ -1.04
AC009404.1-202ENST00000439955 ATP5L2Q7Z4Y8 100 aa8.58□□□□□ -1.04
AC009404.1-202ENST00000439955 C11orf21Q9P2W6 132 aa8.58□□□□□ -1.04
AC009404.1-202ENST00000439955 TRAV12-3A0A0B4J271 114 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 INSP01308 110 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 IGLC6P0CF74 106 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 MED14OSP0DP75 135 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 CTRLP40313 264 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 KIR3DS1Q14943 382 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 COX19Q49B96 90 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 RASL11AQ6T310 242 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 NUP35Q8NFH5 326 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 GTSF1Q8WW33 167 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 FAM210BQ96KR6 192 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 LINC00467Q9BRT7 94 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 C1QTNF4Q9BXJ3 329 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 WFDC10AQ9H1F0 79 aa8.57□□□□□ -1.04
AC009404.1-202ENST00000439955 SORL1Q92673 2214 aa8.56□□□□□ -1.04
AC009404.1-202ENST00000439955 TRAV12-2A0A075B6T6 113 aa8.56□□□□□ -1.04
AC009404.1-202ENST00000439955 TGIF2-C20orf24A0A0A6YYL0 155 aa8.56□□□□□ -1.04
AC009404.1-202ENST00000439955 F2Z2F3 143 aa8.56□□□□□ -1.04
AC009404.1-202ENST00000439955 TCL1AP56279 114 aa8.56□□□□□ -1.04
AC009404.1-202ENST00000439955 ANXA2RQ3ZCQ2 193 aa8.56□□□□□ -1.04
AC009404.1-202ENST00000439955 FAM159AQ6UWV7 190 aa8.56□□□□□ -1.04
AC009404.1-202ENST00000439955 Q8N1Y9 231 aa8.56□□□□□ -1.04
AC009404.1-202ENST00000439955 TMEM256Q8N2U0 113 aa8.56□□□□□ -1.04
AC009404.1-202ENST00000439955 DEFB125Q8N687 156 aa8.56□□□□□ -1.04
AC009404.1-202ENST00000439955 AGRNO00468 2067 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 IGHV1OR15-1A0A075B7D0 117 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 TMSB15BA0A087X1C1 80 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 A0A1B0GW15 77 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 RAB5AP20339 215 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 FXYD7P58549 80 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 Q6ZQT7 251 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 ZNF575Q86XF7 245 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 FER1L6-AS1Q8NA97 138 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 BORCS7Q96B45 105 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 CNFNQ9BYD5 112 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 SRD5A3Q9H8P0 318 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 NAGKQ9UJ70 344 aa8.55□□□□□ -1.04
AC009404.1-202ENST00000439955 TRGV11A0A075B6L2 103 aa8.54□□□□□ -1.04
AC009404.1-202ENST00000439955 KIR2DL5BA0A0G2JN68 375 aa8.54□□□□□ -1.04
AC009404.1-202ENST00000439955 KIR2DL5BA0A0G2JPC4 375 aa8.54□□□□□ -1.04
AC009404.1-202ENST00000439955 A0A1B0GUT8 65 aa8.54□□□□□ -1.04
AC009404.1-202ENST00000439955 SNAI2O43623 268 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms