RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 XKRY2A2RUG3 117 aa15.08■□□□□ 0
CHD3-204ENST00000439235 C7orf77A4D0Y5 90 aa15.08■□□□□ 0
CHD3-204ENST00000439235 MUC21Q5SSG8 566 aa15.08■□□□□ 0
CHD3-204ENST00000439235 C1orf158Q8N1D5 194 aa15.08■□□□□ 0
CHD3-204ENST00000439235 CSNK1G2-AS1Q8NCQ2 148 aa15.08■□□□□ 0
CHD3-204ENST00000439235 LINC00467Q9BRT7 94 aa15.08■□□□□ 0
CHD3-204ENST00000439235 CTDSP1Q9GZU7 261 aa15.08■□□□□ 0
CHD3-204ENST00000439235 RPS10P5Q9NQ39 176 aa15.08■□□□□ 0
CHD3-204ENST00000439235 C11orf21Q9P2W6 132 aa15.08■□□□□ 0
CHD3-204ENST00000439235 PKD1L1Q8TDX9 2849 aa15.08■□□□□ 0
CHD3-204ENST00000439235 TDRG1Q3Y452 100 aa15.07■□□□□ 0
CHD3-204ENST00000439235 ANXA2RQ3ZCQ2 193 aa15.07■□□□□ 0
CHD3-204ENST00000439235 V9GYV3 84 aa15.07■□□□□ 0
CHD3-204ENST00000439235 IGHV3OR16-12A0A075B7B8 117 aa15.06■□□□□ 0
CHD3-204ENST00000439235 A0A087WWC5 75 aa15.06■□□□□ 0
CHD3-204ENST00000439235 IGKV3D-20A0A0C4DH25 116 aa15.06■□□□□ 0
CHD3-204ENST00000439235 CXCL1P09341 107 aa15.06■□□□□ 0
CHD3-204ENST00000439235 RPL19P84098 196 aaKnown RBP15.06■□□□□ 0
CHD3-204ENST00000439235 DEFB121Q5J5C9 76 aa15.06■□□□□ 0
CHD3-204ENST00000439235 Q6ZWC4 215 aa15.06■□□□□ 0
CHD3-204ENST00000439235 TRGV11A0A075B6L2 103 aa15.05■□□□□ -0
CHD3-204ENST00000439235 TMSB15BA0A087X1C1 80 aa15.05■□□□□ -0
CHD3-204ENST00000439235 A8MWL6 223 aa15.05■□□□□ -0
CHD3-204ENST00000439235 DEFB135Q30KP9 77 aa15.05■□□□□ -0
CHD3-204ENST00000439235 ZNF705AQ6ZN79 300 aaPredicted RBP15.05■□□□□ -0
CHD3-204ENST00000439235 CBY3A6NI87 242 aa15.04■□□□□ -0
CHD3-204ENST00000439235 MRAPQ8TCY5 172 aa15.04■□□□□ -0
CHD3-204ENST00000439235 RCHY1Q96PM5 261 aa15.04■□□□□ -0
CHD3-204ENST00000439235 ASIPP42127 132 aa15.03■□□□□ -0
CHD3-204ENST00000439235 TSKUQ8WUA8 353 aa15.03■□□□□ -0
CHD3-204ENST00000439235 TMEM242Q9NWH2 141 aa15.03■□□□□ -0
CHD3-204ENST00000439235 MGAM2Q2M2H8 2515 aa15.03■□□□□ -0
CHD3-204ENST00000439235 TYMSP04818 313 aa15.02■□□□□ -0
CHD3-204ENST00000439235 HTN1P15515 57 aa15.02■□□□□ -0
CHD3-204ENST00000439235 GFRA4Q9GZZ7 299 aa15.02■□□□□ -0
CHD3-204ENST00000439235 IL36BQ9NZH7 164 aa15.02■□□□□ -0
CHD3-204ENST00000439235 TP53TG1Q9Y2A0 90 aa15.02■□□□□ -0
CHD3-204ENST00000439235 DNAH3Q8TD57 4116 aa15.02□□□□□ -0.01
CHD3-204ENST00000439235 GRIFINA4D1Z8 144 aa15.01□□□□□ -0.01
CHD3-204ENST00000439235 FAM231BA6NCW3 169 aa15.01□□□□□ -0.01
CHD3-204ENST00000439235 S100A4P26447 101 aaKnown RBP15.01□□□□□ -0.01
CHD3-204ENST00000439235 DNLZQ5SXM8 178 aa15.01□□□□□ -0.01
CHD3-204ENST00000439235 ATRAIDQ6UW56 229 aa15.01□□□□□ -0.01
CHD3-204ENST00000439235 RNF183Q96D59 192 aa15.01□□□□□ -0.01
CHD3-204ENST00000439235 NEU1Q99519 415 aa15.01□□□□□ -0.01
CHD3-204ENST00000439235 MEGF8Q7Z7M0 2845 aa15.01□□□□□ -0.01
CHD3-204ENST00000439235 SMIM9A6NGZ8 99 aa15□□□□□ -0.01
CHD3-204ENST00000439235 GNRH2O43555 120 aa15□□□□□ -0.01
CHD3-204ENST00000439235 SPRY2O43597 315 aa15□□□□□ -0.01
CHD3-204ENST00000439235 RRN3P1Q2M238 152 aa15□□□□□ -0.01
CHD3-204ENST00000439235 A0A1W2PPQ1 181 aa14.99□□□□□ -0.01
CHD3-204ENST00000439235 MED14OSP0DP75 135 aa14.99□□□□□ -0.01
CHD3-204ENST00000439235 GZMBP10144 247 aa14.99□□□□□ -0.01
CHD3-204ENST00000439235 ZNF415Q09FC8 603 aa14.99□□□□□ -0.01
CHD3-204ENST00000439235 TMEM263Q8WUH6 116 aaKnown RBP14.99□□□□□ -0.01
CHD3-204ENST00000439235 IMMP2LQ96T52 175 aa14.99□□□□□ -0.01
CHD3-204ENST00000439235 TP53TG3Q9ULZ0 132 aa14.99□□□□□ -0.01
CHD3-204ENST00000439235 IGHV3-16A0A0C4DH30 117 aa14.98□□□□□ -0.01
CHD3-204ENST00000439235 SMIM27A0A1W2PRY6 76 aa14.98□□□□□ -0.01
CHD3-204ENST00000439235 KCNIP4Q6PIL6 250 aa14.98□□□□□ -0.01
CHD3-204ENST00000439235 ZNF493Q6ZR52 646 aa14.98□□□□□ -0.01
CHD3-204ENST00000439235 FER1L6-AS1Q8NA97 138 aa14.98□□□□□ -0.01
CHD3-204ENST00000439235 C16orf74Q96GX8 76 aa14.98□□□□□ -0.01
CHD3-204ENST00000439235 X6R8D5 127 aa14.98□□□□□ -0.01
CHD3-204ENST00000439235 CXorf65A6NEN9 183 aa14.97□□□□□ -0.01
CHD3-204ENST00000439235 IGLC6P0CF74 106 aa14.97□□□□□ -0.01
CHD3-204ENST00000439235 S100PP25815 95 aa14.97□□□□□ -0.01
CHD3-204ENST00000439235 TCL1AP56279 114 aa14.97□□□□□ -0.01
CHD3-204ENST00000439235 SBSPONQ8IVN8 264 aa14.97□□□□□ -0.01
CHD3-204ENST00000439235 OR11H2Q8NH07 326 aa14.97□□□□□ -0.01
CHD3-204ENST00000439235 TPPP3Q9BW30 176 aa14.97□□□□□ -0.01
CHD3-204ENST00000439235 NAT8BQ9UHF3 227 aa14.97□□□□□ -0.01
CHD3-204ENST00000439235 HIGD1CA8MV81 97 aa14.96□□□□□ -0.01
CHD3-204ENST00000439235 H3BVH4 76 aa14.96□□□□□ -0.01
CHD3-204ENST00000439235 FOXA3P55318 350 aaPredicted RBP14.96□□□□□ -0.01
CHD3-204ENST00000439235 ZNF575Q86XF7 245 aa14.96□□□□□ -0.01
CHD3-204ENST00000439235 RNASE8Q8TDE3 154 aaKnown RBP14.96□□□□□ -0.01
CHD3-204ENST00000439235 GTSF1Q8WW33 167 aa14.96□□□□□ -0.01
CHD3-204ENST00000439235 SPATA25Q9BR10 227 aa14.96□□□□□ -0.01
CHD3-204ENST00000439235 MDFICQ9P1T7 246 aa14.96□□□□□ -0.01
CHD3-204ENST00000439235 F2Z2F3 143 aa14.95□□□□□ -0.02
CHD3-204ENST00000439235 SNAI2O43623 268 aa14.95□□□□□ -0.02
CHD3-204ENST00000439235 OR5AL1P0C617 328 aa14.95□□□□□ -0.02
CHD3-204ENST00000439235 ARMS2P0C7Q2 107 aa14.95□□□□□ -0.02
CHD3-204ENST00000439235 RNASE3P12724 160 aaKnown RBP14.95□□□□□ -0.02
CHD3-204ENST00000439235 MIFP14174 115 aa14.95□□□□□ -0.02
CHD3-204ENST00000439235 AZU1P20160 251 aa14.95□□□□□ -0.02
CHD3-204ENST00000439235 CTRLP40313 264 aa14.95□□□□□ -0.02
CHD3-204ENST00000439235 DEFA6Q01524 100 aa14.95□□□□□ -0.02
CHD3-204ENST00000439235 BORCS7Q96B45 105 aa14.95□□□□□ -0.02
CHD3-204ENST00000439235 OVOL2Q9BRP0 275 aa14.95□□□□□ -0.02
CHD3-204ENST00000439235 SMCO4Q9NRQ5 59 aa14.95□□□□□ -0.02
CHD3-204ENST00000439235 TIMM8BQ9Y5J9 83 aaPredicted RBP14.95□□□□□ -0.02
CHD3-204ENST00000439235 PRM2P04554 102 aa14.94□□□□□ -0.02
CHD3-204ENST00000439235 C11orf72Q8NBR9 251 aa14.94□□□□□ -0.02
CHD3-204ENST00000439235 C9orf85Q96MD7 179 aa14.94□□□□□ -0.02
CHD3-204ENST00000439235 SNURFLB1AK76 121 aa14.93□□□□□ -0.02
CHD3-204ENST00000439235 LYZL1Q6UWQ5 148 aa14.93□□□□□ -0.02
CHD3-204ENST00000439235 NUP35Q8NFH5 326 aa14.93□□□□□ -0.02
CHD3-204ENST00000439235 PGLYRP4Q96LB8 373 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms