RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 ANAPC16Q96DE5 110 aa7.08□□□□□ -1.28
CUBN-204ENST00000438254 CTDSP1Q9GZU7 261 aa7.08□□□□□ -1.28
CUBN-204ENST00000438254 SRD5A3Q9H8P0 318 aa7.08□□□□□ -1.28
CUBN-204ENST00000438254 TRAV21A0A0B4J279 112 aa7.07□□□□□ -1.28
CUBN-204ENST00000438254 PPP1R2P9O14990 202 aa7.07□□□□□ -1.28
CUBN-204ENST00000438254 MT-ND4LP03901 98 aa7.07□□□□□ -1.28
CUBN-204ENST00000438254 IGHV4-30-4P0DP06 118 aa7.07□□□□□ -1.28
CUBN-204ENST00000438254 RNASE4P34096 147 aaKnown RBP7.07□□□□□ -1.28
CUBN-204ENST00000438254 FXYD7P58549 80 aa7.07□□□□□ -1.28
CUBN-204ENST00000438254 TDRG1Q3Y452 100 aa7.07□□□□□ -1.28
CUBN-204ENST00000438254 MORN3Q6PF18 240 aaPredicted RBP7.07□□□□□ -1.28
CUBN-204ENST00000438254 YPEL4Q96NS1 127 aa7.07□□□□□ -1.28
CUBN-204ENST00000438254 C20orf144Q9BQM9 153 aa7.07□□□□□ -1.28
CUBN-204ENST00000438254 RPP21Q9H633 154 aaKnown RBP7.07□□□□□ -1.28
CUBN-204ENST00000438254 RPS10P5Q9NQ39 176 aa7.07□□□□□ -1.28
CUBN-204ENST00000438254 KIR2DL5BA0A0G2JN68 375 aa7.06□□□□□ -1.28
CUBN-204ENST00000438254 KIR2DL5BA0A0G2JPC4 375 aa7.06□□□□□ -1.28
CUBN-204ENST00000438254 J3KRW8 73 aa7.06□□□□□ -1.28
CUBN-204ENST00000438254 GATCO43716 136 aaKnown RBP7.06□□□□□ -1.28
CUBN-204ENST00000438254 P01737 135 aa7.06□□□□□ -1.28
CUBN-204ENST00000438254 CXCL1P09341 107 aa7.06□□□□□ -1.28
CUBN-204ENST00000438254 RPL35AP18077 110 aaKnown RBP7.06□□□□□ -1.28
CUBN-204ENST00000438254 FOXA3P55318 350 aaPredicted RBP7.06□□□□□ -1.28
CUBN-204ENST00000438254 RPL19P84098 196 aaKnown RBP7.06□□□□□ -1.28
CUBN-204ENST00000438254 DNLZQ5SXM8 178 aa7.06□□□□□ -1.28
CUBN-204ENST00000438254 KIR2DL5AQ8N109 375 aa7.06□□□□□ -1.28
CUBN-204ENST00000438254 C1orf158Q8N1D5 194 aa7.06□□□□□ -1.28
CUBN-204ENST00000438254 KIR2DL5BQ8NHK3 375 aa7.06□□□□□ -1.28
CUBN-204ENST00000438254 LINC00467Q9BRT7 94 aa7.06□□□□□ -1.28
CUBN-204ENST00000438254 KRTAP4-11Q9BYQ6 195 aa7.06□□□□□ -1.28
CUBN-204ENST00000438254 MGAM2Q2M2H8 2515 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 LOC102724200A0A096LPH7 203 aaPredicted RBP7.05□□□□□ -1.28
CUBN-204ENST00000438254 TRAV12-3A0A0B4J271 114 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 SMIM27A0A1W2PRY6 76 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 FAM231BA6NCW3 169 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 CXorf65A6NEN9 183 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 ZNF705GA8MUZ8 300 aaPredicted RBP7.05□□□□□ -1.28
CUBN-204ENST00000438254 H7BYZ3 331 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 EIF4EBP3O60516 100 aaPredicted RBP7.05□□□□□ -1.28
CUBN-204ENST00000438254 SCO1O75880 301 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 CA1P00915 261 aaPredicted RBP7.05□□□□□ -1.28
CUBN-204ENST00000438254 NUTF2P61970 127 aaKnown RBP7.05□□□□□ -1.28
CUBN-204ENST00000438254 C15orf54Q8N8G6 183 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 TSKUQ8WUA8 353 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 GTSF1Q8WW33 167 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 DAZAP1Q96EP5 407 aaKnown RBP7.05□□□□□ -1.28
CUBN-204ENST00000438254 IMMP2LQ96T52 175 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 CSTL1Q9H114 145 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 TUBA4BQ9H853 241 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 IL36BQ9NZH7 164 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 NBEAL1Q6ZS30 2694 aa7.05□□□□□ -1.28
CUBN-204ENST00000438254 TMEM189A5PLL7 270 aa7.04□□□□□ -1.28
CUBN-204ENST00000438254 INSP01308 110 aa7.04□□□□□ -1.28
CUBN-204ENST00000438254 IGLC6P0CF74 106 aa7.04□□□□□ -1.28
CUBN-204ENST00000438254 ANXA2RQ3ZCQ2 193 aa7.04□□□□□ -1.28
CUBN-204ENST00000438254 ZNF705AQ6ZN79 300 aaPredicted RBP7.04□□□□□ -1.28
CUBN-204ENST00000438254 OR2D3Q8NGH3 330 aa7.04□□□□□ -1.28
CUBN-204ENST00000438254 GFRA4Q9GZZ7 299 aa7.04□□□□□ -1.28
CUBN-204ENST00000438254 XCL2Q9UBD3 114 aa7.04□□□□□ -1.28
CUBN-204ENST00000438254 IGHV1OR15-1A0A075B7D0 117 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 A8MWL6 223 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 K7EIL1 84 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 TYMSP04818 313 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 GZMBP10144 247 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 RPS20P60866 119 aaKnown RBP7.03□□□□□ -1.28
CUBN-204ENST00000438254 MUC21Q5SSG8 566 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 CBLN2Q8IUK8 224 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 TMEM256Q8N2U0 113 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 NEU1Q99519 415 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 PYGO2Q9BRQ0 406 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 C1QTNF4Q9BXJ3 329 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 SCRT2Q9NQ03 307 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 TP53TG3Q9ULZ0 132 aa7.03□□□□□ -1.28
CUBN-204ENST00000438254 NOTCH1P46531 2555 aa7.02□□□□□ -1.29
CUBN-204ENST00000438254 SNAI2O43623 268 aa7.02□□□□□ -1.29
CUBN-204ENST00000438254 ORM1P02763 201 aa7.02□□□□□ -1.29
CUBN-204ENST00000438254 MED14OSP0DP75 135 aa7.02□□□□□ -1.29
CUBN-204ENST00000438254 RNASE3P12724 160 aaKnown RBP7.02□□□□□ -1.29
CUBN-204ENST00000438254 CTRLP40313 264 aa7.02□□□□□ -1.29
CUBN-204ENST00000438254 APOC4P55056 127 aa7.02□□□□□ -1.29
CUBN-204ENST00000438254 ELOBQ15370 118 aa7.02□□□□□ -1.29
CUBN-204ENST00000438254 TMEM88Q6PEY1 159 aa7.02□□□□□ -1.29
CUBN-204ENST00000438254 NUP35Q8NFH5 326 aa7.02□□□□□ -1.29
CUBN-204ENST00000438254 KCNS1Q96KK3 526 aa7.02□□□□□ -1.29
CUBN-204ENST00000438254 CNFNQ9BYD5 112 aa7.02□□□□□ -1.29
CUBN-204ENST00000438254 SMCO4Q9NRQ5 59 aa7.02□□□□□ -1.29
CUBN-204ENST00000438254 TMSB15BA0A087X1C1 80 aa7.01□□□□□ -1.29
CUBN-204ENST00000438254 IGHV3-16A0A0C4DH30 117 aa7.01□□□□□ -1.29
CUBN-204ENST00000438254 GRIFINA4D1Z8 144 aa7.01□□□□□ -1.29
CUBN-204ENST00000438254 HIGD1CA8MV81 97 aa7.01□□□□□ -1.29
CUBN-204ENST00000438254 UBE2CO00762 179 aa7.01□□□□□ -1.29
CUBN-204ENST00000438254 GNRH2O43555 120 aa7.01□□□□□ -1.29
CUBN-204ENST00000438254 PRM2P04554 102 aa7.01□□□□□ -1.29
CUBN-204ENST00000438254 OR5AL1P0C617 328 aa7.01□□□□□ -1.29
CUBN-204ENST00000438254 FRMD6-AS1P0C7T7 363 aa7.01□□□□□ -1.29
CUBN-204ENST00000438254 FAM3BP58499 235 aaPredicted RBP7.01□□□□□ -1.29
CUBN-204ENST00000438254 KRTAP19-4Q3LI73 84 aa7.01□□□□□ -1.29
CUBN-204ENST00000438254 FAM159AQ6UWV7 190 aa7.01□□□□□ -1.29
CUBN-204ENST00000438254 C11orf72Q8NBR9 251 aa7.01□□□□□ -1.29
CUBN-204ENST00000438254 IL17DQ8TAD2 202 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms