RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 K7EQM0 130 aa10.58□□□□□ -0.72
USB1-202ENST00000423271 PEX7O00628 323 aa10.58□□□□□ -0.72
USB1-202ENST00000423271 ZNF324O75467 553 aaPredicted RBP10.58□□□□□ -0.72
USB1-202ENST00000423271 C1orf134Q5TEV5 83 aa10.58□□□□□ -0.72
USB1-202ENST00000423271 Q6ZQT7 251 aa10.58□□□□□ -0.72
USB1-202ENST00000423271 C11orf72Q8NBR9 251 aa10.58□□□□□ -0.72
USB1-202ENST00000423271 TVP23CQ96ET8 276 aa10.58□□□□□ -0.72
USB1-202ENST00000423271 GSN-AS1Q9NRJ2 163 aa10.58□□□□□ -0.72
USB1-202ENST00000423271 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.72
USB1-202ENST00000423271 HSPG2P98160 4391 aa10.58□□□□□ -0.72
USB1-202ENST00000423271 TRAV34A0A0B4J273 112 aa10.57□□□□□ -0.72
USB1-202ENST00000423271 IGLV2-11P01706 119 aa10.57□□□□□ -0.72
USB1-202ENST00000423271 CCL18P55774 89 aa10.57□□□□□ -0.72
USB1-202ENST00000423271 DAZ2Q13117 558 aaKnown RBP10.57□□□□□ -0.72
USB1-202ENST00000423271 LINC00479Q96M42 142 aa10.57□□□□□ -0.72
USB1-202ENST00000423271 PSG8Q9UQ74 426 aa10.57□□□□□ -0.72
USB1-202ENST00000423271 DNAH5Q8TE73 4624 aa10.56□□□□□ -0.72
USB1-202ENST00000423271 NBDYA0A0U1RRE5 68 aa10.56□□□□□ -0.72
USB1-202ENST00000423271 F6UZH7 168 aa10.56□□□□□ -0.72
USB1-202ENST00000423271 PPT1P50897 306 aa10.56□□□□□ -0.72
USB1-202ENST00000423271 FLI1Q01543 452 aaPredicted RBP10.56□□□□□ -0.72
USB1-202ENST00000423271 SOHLH1Q5JUK2 328 aa10.56□□□□□ -0.72
USB1-202ENST00000423271 EIF4E3Q8N5X7 224 aaKnown RBP10.56□□□□□ -0.72
USB1-202ENST00000423271 TMEM75Q8N9X5 138 aa10.56□□□□□ -0.72
USB1-202ENST00000423271 ZNF680Q8NEM1 530 aa10.56□□□□□ -0.72
USB1-202ENST00000423271 HIST1H2BAQ96A08 127 aa10.56□□□□□ -0.72
USB1-202ENST00000423271 LINC00467Q9BRT7 94 aa10.56□□□□□ -0.72
USB1-202ENST00000423271 KRTAP17-1Q9BYP8 105 aa10.56□□□□□ -0.72
USB1-202ENST00000423271 GNG13Q9P2W3 67 aa10.56□□□□□ -0.72
USB1-202ENST00000423271 ABCA13Q86UQ4 5058 aa10.55□□□□□ -0.72
USB1-202ENST00000423271 TEX46H3BTG2 121 aa10.55□□□□□ -0.72
USB1-202ENST00000423271 ANXA2RQ3ZCQ2 193 aa10.55□□□□□ -0.72
USB1-202ENST00000423271 PRNTQ86SH4 94 aa10.55□□□□□ -0.72
USB1-202ENST00000423271 C8orf49Q96NF6 230 aa10.55□□□□□ -0.72
USB1-202ENST00000423271 NDFIP1Q9BT67 221 aa10.55□□□□□ -0.72
USB1-202ENST00000423271 TREM1Q9NP99 234 aa10.55□□□□□ -0.72
USB1-202ENST00000423271 TP53TG3Q9ULZ0 132 aa10.55□□□□□ -0.72
USB1-202ENST00000423271 KLF12Q9Y4X4 402 aa10.55□□□□□ -0.72
USB1-202ENST00000423271 MUC4Q99102 2169 aa10.55□□□□□ -0.72
USB1-202ENST00000423271 TRGV1A0A0A0MS02 117 aa10.54□□□□□ -0.72
USB1-202ENST00000423271 APOBP04114 4563 aaKnown RBP10.54□□□□□ -0.72
USB1-202ENST00000423271 Q6AWC8 147 aa10.54□□□□□ -0.72
USB1-202ENST00000423271 Q86TA4 180 aa10.54□□□□□ -0.72
USB1-202ENST00000423271 TCEAL7Q9BRU2 100 aa10.54□□□□□ -0.72
USB1-202ENST00000423271 MANBALQ9NQG1 85 aa10.54□□□□□ -0.72
USB1-202ENST00000423271 TRGV2A0A075B6R0 118 aa10.53□□□□□ -0.72
USB1-202ENST00000423271 SCO2A0A1W2PP80 73 aa10.53□□□□□ -0.72
USB1-202ENST00000423271 FBLL1A6NHQ2 334 aaKnown RBP10.53□□□□□ -0.72
USB1-202ENST00000423271 TCL1AP56279 114 aa10.53□□□□□ -0.72
USB1-202ENST00000423271 IGHV1OR15-1A0A075B7D0 117 aa10.52□□□□□ -0.73
USB1-202ENST00000423271 RGS13O14921 159 aa10.52□□□□□ -0.73
USB1-202ENST00000423271 SPINK4O60575 86 aa10.52□□□□□ -0.73
USB1-202ENST00000423271 AKR1C3P42330 323 aa10.52□□□□□ -0.73
USB1-202ENST00000423271 ZNF80P51504 273 aaPredicted RBP10.52□□□□□ -0.73
USB1-202ENST00000423271 BLOC1S1P78537 153 aa10.52□□□□□ -0.73
USB1-202ENST00000423271 TNP2Q05952 138 aa10.52□□□□□ -0.73
USB1-202ENST00000423271 MUC21Q5SSG8 566 aa10.52□□□□□ -0.73
USB1-202ENST00000423271 C6orf223Q8N319 242 aa10.52□□□□□ -0.73
USB1-202ENST00000423271 VSIG2Q96IQ7 327 aa10.52□□□□□ -0.73
USB1-202ENST00000423271 C18orf15Q96N68 181 aa10.52□□□□□ -0.73
USB1-202ENST00000423271 H3BNG1 76 aa10.51□□□□□ -0.73
USB1-202ENST00000423271 IFNA1P01562 189 aa10.51□□□□□ -0.73
USB1-202ENST00000423271 UBE2G1P62253 170 aa10.51□□□□□ -0.73
USB1-202ENST00000423271 ESRGQ1W209 222 aa10.51□□□□□ -0.73
USB1-202ENST00000423271 SMUG1Q53HV7 270 aa10.51□□□□□ -0.73
USB1-202ENST00000423271 SAPCD1Q5SSQ6 148 aa10.51□□□□□ -0.73
USB1-202ENST00000423271 IBA57Q5T440 356 aaKnown RBP10.51□□□□□ -0.73
USB1-202ENST00000423271 ZNF575Q86XF7 245 aa10.51□□□□□ -0.73
USB1-202ENST00000423271 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
USB1-202ENST00000423271 KRTAP1-5Q9BYS1 174 aa10.51□□□□□ -0.73
USB1-202ENST00000423271 MRPL16Q9NX20 251 aaKnown RBP10.51□□□□□ -0.73
USB1-202ENST00000423271 TRAV21A0A0B4J279 112 aa10.5□□□□□ -0.73
USB1-202ENST00000423271 GCGP01275 180 aa10.5□□□□□ -0.73
USB1-202ENST00000423271 IGHV3-53P01767 116 aa10.5□□□□□ -0.73
USB1-202ENST00000423271 Q9H8V8 135 aa10.5□□□□□ -0.73
USB1-202ENST00000423271 NAGKQ9UJ70 344 aa10.5□□□□□ -0.73
USB1-202ENST00000423271 A0A096LPF7 62 aa10.49□□□□□ -0.73
USB1-202ENST00000423271 TRBV6-1A0A0K0K1D8 114 aa10.49□□□□□ -0.73
USB1-202ENST00000423271 MED14OSP0DP75 135 aa10.49□□□□□ -0.73
USB1-202ENST00000423271 BCL2P10415 239 aa10.49□□□□□ -0.73
USB1-202ENST00000423271 TMEM183BQ1AE95 376 aa10.49□□□□□ -0.73
USB1-202ENST00000423271 FAM159AQ6UWV7 190 aa10.49□□□□□ -0.73
USB1-202ENST00000423271 C11orf52Q96A22 123 aa10.49□□□□□ -0.73
USB1-202ENST00000423271 MRPS16Q9Y3D3 137 aaKnown RBP10.49□□□□□ -0.73
USB1-202ENST00000423271 LTAP01374 205 aa10.48□□□□□ -0.73
USB1-202ENST00000423271 MEF2BQ02080 365 aaPredicted RBP10.48□□□□□ -0.73
USB1-202ENST00000423271 ZNF415Q09FC8 603 aa10.48□□□□□ -0.73
USB1-202ENST00000423271 TEX261Q6UWH6 196 aa10.48□□□□□ -0.73
USB1-202ENST00000423271 TMEM183AQ8IXX5 376 aa10.48□□□□□ -0.73
USB1-202ENST00000423271 LYPD6BQ8NI32 183 aa10.48□□□□□ -0.73
USB1-202ENST00000423271 TXNDC17Q9BRA2 123 aa10.48□□□□□ -0.73
USB1-202ENST00000423271 UPK3BQ9BT76 320 aa10.48□□□□□ -0.73
USB1-202ENST00000423271 C11orf21Q9P2W6 132 aa10.48□□□□□ -0.73
USB1-202ENST00000423271 ZFP30Q9Y2G7 519 aa10.48□□□□□ -0.73
USB1-202ENST00000423271 PFN1P07737 140 aaKnown RBP10.47□□□□□ -0.73
USB1-202ENST00000423271 TDRG1Q3Y452 100 aa10.47□□□□□ -0.73
USB1-202ENST00000423271 ZC2HC1AQ96GY0 325 aa10.47□□□□□ -0.73
USB1-202ENST00000423271 MDFICQ9P1T7 246 aa10.47□□□□□ -0.73
USB1-202ENST00000423271 VAX2Q9UIW0 290 aa10.47□□□□□ -0.73
USB1-202ENST00000423271 GNRH2O43555 120 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms