RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 Q1RN00 199 aa4.9□□□□□ -1.62
CCNT1-202ENST00000417344 TMEM30BQ3MIR4 351 aa4.9□□□□□ -1.62
CCNT1-202ENST00000417344 DEFB121Q5J5C9 76 aa4.9□□□□□ -1.62
CCNT1-202ENST00000417344 TMEM170BQ5T4T1 132 aa4.9□□□□□ -1.62
CCNT1-202ENST00000417344 SLC25A45Q8N413 288 aa4.9□□□□□ -1.62
CCNT1-202ENST00000417344 KIR2DL5BQ8NHK3 375 aa4.9□□□□□ -1.62
CCNT1-202ENST00000417344 MRAPQ8TCY5 172 aa4.9□□□□□ -1.62
CCNT1-202ENST00000417344 DUX3Q96PT4 197 aa4.9□□□□□ -1.62
CCNT1-202ENST00000417344 BRWD1Q9NSI6 2320 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 IGHV5-10-1A0A0J9YXX1 117 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 H3BT86 120 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 CDX4O14627 284 aaPredicted RBP4.9□□□□□ -1.63
CCNT1-202ENST00000417344 TRGV3P03979 118 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 MED14OSP0DP75 135 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 COX7CP15954 63 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 WT1P19544 449 aaPredicted RBP4.9□□□□□ -1.63
CCNT1-202ENST00000417344 ERCC8Q13216 396 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 VMA21Q3ZAQ7 101 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 Q6ZS52 159 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 Q8TAT8 98 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 SMIM2Q9BVW6 85 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 LINC00574Q9H8X3 128 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 FREM1Q5H8C1 2179 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 VPS13AQ96RL7 3174 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 TNCP24821 2201 aa4.9□□□□□ -1.63
CCNT1-202ENST00000417344 TRAV17A0A0B4J275 112 aa4.89□□□□□ -1.63
CCNT1-202ENST00000417344 H7C423 109 aa4.89□□□□□ -1.63
CCNT1-202ENST00000417344 APELAP0DMC3 54 aa4.89□□□□□ -1.63
CCNT1-202ENST00000417344 ZNF22P17026 224 aaPredicted RBP4.89□□□□□ -1.63
CCNT1-202ENST00000417344 ZNF672Q499Z4 452 aaPredicted RBP4.89□□□□□ -1.63
CCNT1-202ENST00000417344 DUX4L9Q6RFH8 374 aaPredicted RBP4.89□□□□□ -1.63
CCNT1-202ENST00000417344 DUX5Q96PT3 197 aa4.89□□□□□ -1.63
CCNT1-202ENST00000417344 METTL26Q96S19 204 aa4.89□□□□□ -1.63
CCNT1-202ENST00000417344 SDK2Q58EX2 2172 aa4.89□□□□□ -1.63
CCNT1-202ENST00000417344 ASXL3Q9C0F0 2248 aa4.89□□□□□ -1.63
CCNT1-202ENST00000417344 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.89□□□□□ -1.63
CCNT1-202ENST00000417344 TRBV30A0A0K0K1B3 111 aa4.89□□□□□ -1.63
CCNT1-202ENST00000417344 ACYP1P07311 99 aa4.89□□□□□ -1.63
CCNT1-202ENST00000417344 MRGPRG-AS1Q2M3A8 158 aa4.89□□□□□ -1.63
CCNT1-202ENST00000417344 SPINK14Q6IE38 97 aa4.89□□□□□ -1.63
CCNT1-202ENST00000417344 C2orf66Q6UXQ4 117 aa4.89□□□□□ -1.63
CCNT1-202ENST00000417344 BEX4Q9NWD9 120 aaPredicted RBP4.89□□□□□ -1.63
CCNT1-202ENST00000417344 ZNF256Q9Y2P7 627 aaPredicted RBP4.89□□□□□ -1.63
CCNT1-202ENST00000417344 LAMA1P25391 3075 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 A0A0G2JNJ9 132 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 C11orf86A6NJI1 115 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 OVOL1O14753 267 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 TRIAP1O43715 76 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 LYZL6O75951 148 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 IGKV1-17P01599 117 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 UCNP55089 124 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 TSPEAR-AS2P59090 65 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 Q0VFX4 171 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 PAPPA-AS1Q5QFB9 102 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 GUSBP11Q6P575 273 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 C14orf178Q8N769 122 aaPredicted RBP4.88□□□□□ -1.63
CCNT1-202ENST00000417344 DPH3Q96FX2 82 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 Q9UFV3 132 aa4.88□□□□□ -1.63
CCNT1-202ENST00000417344 IGLV4-69A0A075B6H9 119 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 C17orf100A8MU93 164 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 LINC01565O15544 149 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 LHBP01229 141 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 TRACP01848 142 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 CRYGDP07320 174 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 CCL5P13501 91 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 IGHV1-2P23083 117 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 FOLR3P41439 243 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 RPL27AP46776 148 aaKnown RBP4.87□□□□□ -1.63
CCNT1-202ENST00000417344 C4orf26Q17RF5 130 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 FAM201AQ5SY85 155 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 LINC00643Q86TS7 51 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 ZNF491Q8N8L2 437 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 RNF125Q96EQ8 232 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 C2orf48Q96LS8 159 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 AMELXQ99217 191 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 CHD9Q3L8U1 2897 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 hADV29S1A0JD25 119 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 I3L2K1 104 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 IGKV3-15P01624 115 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 ZNF883P0CG24 379 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 LGALS3P17931 250 aaKnown RBP4.87□□□□□ -1.63
CCNT1-202ENST00000417344 TMEM258P61165 79 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 SUMO2P61956 95 aaKnown RBP4.87□□□□□ -1.63
CCNT1-202ENST00000417344 HRCT1Q6UXD1 115 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 MUSTN1Q8IVN3 82 aa4.87□□□□□ -1.63
CCNT1-202ENST00000417344 TMEM223A0PJW6 202 aa4.86□□□□□ -1.63
CCNT1-202ENST00000417344 J3QQQ9 107 aa4.86□□□□□ -1.63
CCNT1-202ENST00000417344 CXCL5P42830 114 aa4.86□□□□□ -1.63
CCNT1-202ENST00000417344 IL11RAQ14626 422 aa4.86□□□□□ -1.63
CCNT1-202ENST00000417344 TMEM240Q5SV17 173 aa4.86□□□□□ -1.63
CCNT1-202ENST00000417344 Q5XG85 94 aa4.86□□□□□ -1.63
CCNT1-202ENST00000417344 CFHR4Q92496 578 aa4.86□□□□□ -1.63
CCNT1-202ENST00000417344 GAFA1Q96PS6 74 aa4.86□□□□□ -1.63
CCNT1-202ENST00000417344 SLC50A1Q9BRV3 221 aa4.86□□□□□ -1.63
CCNT1-202ENST00000417344 TTTY12Q9BZ98 90 aa4.86□□□□□ -1.63
CCNT1-202ENST00000417344 REV3LO60673 3130 aa4.86□□□□□ -1.63
CCNT1-202ENST00000417344 TRAV41A0A0B4J266 112 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 IGKV3D-20A0A0C4DH25 116 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 F8WDY8 70 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 OXTP01178 125 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms