RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 Q6ZRM9 215 aa10.32□□□□□ -0.76
COL6A3-206ENST00000409809 SLC25A45Q8N413 288 aa10.32□□□□□ -0.76
COL6A3-206ENST00000409809 DAD1P61803 113 aa10.31□□□□□ -0.76
COL6A3-206ENST00000409809 RPP25Q9BUL9 199 aaKnown RBP10.31□□□□□ -0.76
COL6A3-206ENST00000409809 KIAA1671Q9BY89 1806 aa10.31□□□□□ -0.76
COL6A3-206ENST00000409809 IGHV1OR15-1A0A075B7D0 117 aa10.31□□□□□ -0.76
COL6A3-206ENST00000409809 TMEM200BQ69YZ2 307 aa10.31□□□□□ -0.76
COL6A3-206ENST00000409809 FGFBP3Q8TAT2 258 aa10.31□□□□□ -0.76
COL6A3-206ENST00000409809 MUC6Q6W4X9 2439 aa10.31□□□□□ -0.76
COL6A3-206ENST00000409809 NREPQ16612 68 aa10.31□□□□□ -0.76
COL6A3-206ENST00000409809 MUC4Q99102 2169 aa10.31□□□□□ -0.76
COL6A3-206ENST00000409809 TINCRA0A1B0GVN0 87 aa10.31□□□□□ -0.76
COL6A3-206ENST00000409809 ZNF833PQ6ZTB9 187 aa10.31□□□□□ -0.76
COL6A3-206ENST00000409809 RNASE6Q93091 150 aaKnown RBP10.31□□□□□ -0.76
COL6A3-206ENST00000409809 RNF183Q96D59 192 aa10.31□□□□□ -0.76
COL6A3-206ENST00000409809 PTPN13Q12923 2485 aa10.31□□□□□ -0.76
COL6A3-206ENST00000409809 CELA3BP08861 270 aa10.3□□□□□ -0.76
COL6A3-206ENST00000409809 TECTAO75443 2155 aa10.3□□□□□ -0.76
COL6A3-206ENST00000409809 TIMM17AQ99595 171 aa10.3□□□□□ -0.76
COL6A3-206ENST00000409809 C11orf86A6NJI1 115 aa10.3□□□□□ -0.76
COL6A3-206ENST00000409809 LINC00311Q8N616 119 aa10.3□□□□□ -0.76
COL6A3-206ENST00000409809 C2CD3Q4AC94 2353 aa10.3□□□□□ -0.76
COL6A3-206ENST00000409809 SONP18583 2426 aaKnown RBP10.3□□□□□ -0.76
COL6A3-206ENST00000409809 IGHV3OR16-8A0A075B7F1 116 aa10.3□□□□□ -0.76
COL6A3-206ENST00000409809 PSPNO60542 156 aa10.3□□□□□ -0.76
COL6A3-206ENST00000409809 RFPL3SP0C7P2 107 aa10.3□□□□□ -0.76
COL6A3-206ENST00000409809 Q6Q795 121 aa10.3□□□□□ -0.76
COL6A3-206ENST00000409809 K7ERS5 55 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 Q8N1Y9 231 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 TMEM178BH3BS89 294 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 VOPP1Q96AW1 172 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 C7orf69Q9H7B7 122 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 TRAV3A0A0B4J244 114 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 DYNAPQ8N1N2 210 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 CEP192Q8TEP8 1941 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 K7EN84 100 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 RBX1P62877 108 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 FAM110DQ8TAY7 271 aaPredicted RBP10.29□□□□□ -0.76
COL6A3-206ENST00000409809 IGHV3-11P01762 117 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 HIGD2BQ4VC39 106 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 BAALCQ8WXS3 180 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 C8orf49Q96NF6 230 aa10.29□□□□□ -0.76
COL6A3-206ENST00000409809 MYO9AB2RTY4 2548 aa10.28□□□□□ -0.76
COL6A3-206ENST00000409809 TRBV6-1A0A0K0K1D8 114 aa10.28□□□□□ -0.76
COL6A3-206ENST00000409809 A4D1N5 150 aa10.28□□□□□ -0.76
COL6A3-206ENST00000409809 FXYD2P54710 66 aa10.28□□□□□ -0.76
COL6A3-206ENST00000409809 NDUFA4O00483 81 aa10.28□□□□□ -0.76
COL6A3-206ENST00000409809 PTPRBP23467 1997 aa10.28□□□□□ -0.76
COL6A3-206ENST00000409809 A0A087WV48 116 aa10.28□□□□□ -0.76
COL6A3-206ENST00000409809 GATA3P23771 443 aa10.28□□□□□ -0.76
COL6A3-206ENST00000409809 TM2D2Q9BX73 214 aa10.28□□□□□ -0.76
COL6A3-206ENST00000409809 CFHR1Q03591 330 aa10.28□□□□□ -0.76
COL6A3-206ENST00000409809 ZNF837Q96EG3 531 aaPredicted RBP10.28□□□□□ -0.76
COL6A3-206ENST00000409809 IGHV1-46P01743 117 aa10.27□□□□□ -0.76
COL6A3-206ENST00000409809 CD59P13987 128 aa10.27□□□□□ -0.76
COL6A3-206ENST00000409809 LTBRP36941 435 aa10.27□□□□□ -0.76
COL6A3-206ENST00000409809 RHPN1-AS1Q9BWJ2 59 aa10.27□□□□□ -0.76
COL6A3-206ENST00000409809 Q9H8V8 135 aa10.27□□□□□ -0.76
COL6A3-206ENST00000409809 IGHV1-69P01742 117 aa10.27□□□□□ -0.76
COL6A3-206ENST00000409809 NDUFA11Q86Y39 141 aa10.27□□□□□ -0.76
COL6A3-206ENST00000409809 SERP2Q8N6R1 65 aa10.27□□□□□ -0.76
COL6A3-206ENST00000409809 PFN2P35080 140 aa10.27□□□□□ -0.77
COL6A3-206ENST00000409809 C1orf195Q5TG92 126 aa10.27□□□□□ -0.77
COL6A3-206ENST00000409809 DAZ2Q13117 558 aaKnown RBP10.27□□□□□ -0.77
COL6A3-206ENST00000409809 DAZ4Q86SG3 579 aaKnown RBP10.27□□□□□ -0.77
COL6A3-206ENST00000409809 DAZ3Q9NR90 486 aaKnown RBP10.27□□□□□ -0.77
COL6A3-206ENST00000409809 A0A0G2JRQ6 117 aa10.27□□□□□ -0.77
COL6A3-206ENST00000409809 MED14OSP0DP75 135 aa10.27□□□□□ -0.77
COL6A3-206ENST00000409809 P0DMU3 169 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 FAM231AP0DMU4 169 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 FAM231CP0DMU5 169 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 FANCD2OSQ96PS1 177 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 IGHV3-73A0A0B4J1V6 119 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 H3BUA1 57 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 GTSF1Q8WW33 167 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 TOMM6Q96B49 74 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 CD177Q8N6Q3 437 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 CDPF1Q6NVV7 123 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 UBE2AP49459 152 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 PRR20EP86478 221 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 PRR20CP86479 221 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 PRR20DP86480 221 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 PRR20BP86481 221 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 PRR20AP86496 221 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 Q8TCH9 128 aa10.26□□□□□ -0.77
COL6A3-206ENST00000409809 TGFBR3LH3BV60 316 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 CTRLP40313 264 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 GGNQ86UU5 652 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 IGHV1-18A0A0C4DH31 117 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 IGHV1-58A0A0C4DH39 117 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 COLQQ9Y215 455 aaPredicted RBP10.25□□□□□ -0.77
COL6A3-206ENST00000409809 UPK3BQ9BT76 320 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 IGKV1-16P04430 117 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 ANXA2RQ3ZCQ2 193 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 SND1-IT1Q9HBX3 110 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 BUB3O43684 328 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 CRIPAKQ8N1N5 446 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 DSCAMO60469 2012 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 CRYGCP07315 174 aa10.25□□□□□ -0.77
COL6A3-206ENST00000409809 C5orf63A6NC05 138 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms