RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 C20orf144Q9BQM9 153 aa14.92□□□□□ -0.02
CHKB-201ENST00000406938 ANXA2RQ3ZCQ2 193 aa14.92□□□□□ -0.02
CHKB-201ENST00000406938 CT83Q5H943 113 aa14.92□□□□□ -0.02
CHKB-201ENST00000406938 C1orf158Q8N1D5 194 aa14.92□□□□□ -0.02
CHKB-201ENST00000406938 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.92□□□□□ -0.02
CHKB-201ENST00000406938 CSNK1G2-AS1Q8NCQ2 148 aa14.92□□□□□ -0.02
CHKB-201ENST00000406938 FAM159AQ6UWV7 190 aa14.91□□□□□ -0.02
CHKB-201ENST00000406938 K7EIL1 84 aa14.9□□□□□ -0.02
CHKB-201ENST00000406938 FRMD6-AS1P0C7T7 363 aa14.9□□□□□ -0.02
CHKB-201ENST00000406938 GZMBP10144 247 aa14.9□□□□□ -0.02
CHKB-201ENST00000406938 ZNF575Q86XF7 245 aa14.9□□□□□ -0.02
CHKB-201ENST00000406938 TMEM208Q9BTX3 173 aa14.9□□□□□ -0.02
CHKB-201ENST00000406938 TMEM242Q9NWH2 141 aa14.9□□□□□ -0.02
CHKB-201ENST00000406938 IGHV3OR16-12A0A075B7B8 117 aa14.89□□□□□ -0.03
CHKB-201ENST00000406938 IGHV1OR15-1A0A075B7D0 117 aa14.89□□□□□ -0.03
CHKB-201ENST00000406938 TDRG1Q3Y452 100 aa14.89□□□□□ -0.03
CHKB-201ENST00000406938 TMEM256Q8N2U0 113 aa14.89□□□□□ -0.03
CHKB-201ENST00000406938 LINC01587Q99440 93 aa14.89□□□□□ -0.03
CHKB-201ENST00000406938 GRIFINA4D1Z8 144 aa14.88□□□□□ -0.03
CHKB-201ENST00000406938 TSKUQ8WUA8 353 aa14.88□□□□□ -0.03
CHKB-201ENST00000406938 PYGO2Q9BRQ0 406 aa14.88□□□□□ -0.03
CHKB-201ENST00000406938 GOLT1BQ9Y3E0 138 aa14.88□□□□□ -0.03
CHKB-201ENST00000406938 XKRY2A2RUG3 117 aa14.88□□□□□ -0.03
CHKB-201ENST00000406938 A8MWL6 223 aa14.88□□□□□ -0.03
CHKB-201ENST00000406938 HTN1P15515 57 aa14.88□□□□□ -0.03
CHKB-201ENST00000406938 TCL1AP56279 114 aa14.88□□□□□ -0.03
CHKB-201ENST00000406938 RPS20P60866 119 aaKnown RBP14.88□□□□□ -0.03
CHKB-201ENST00000406938 KCNS1Q96KK3 526 aa14.88□□□□□ -0.03
CHKB-201ENST00000406938 IL36BQ9NZH7 164 aa14.88□□□□□ -0.03
CHKB-201ENST00000406938 TP53TG3Q9ULZ0 132 aa14.88□□□□□ -0.03
CHKB-201ENST00000406938 TYMSP04818 313 aa14.87□□□□□ -0.03
CHKB-201ENST00000406938 TMEM88Q6PEY1 159 aa14.87□□□□□ -0.03
CHKB-201ENST00000406938 CBLN2Q8IUK8 224 aa14.87□□□□□ -0.03
CHKB-201ENST00000406938 NEU1Q99519 415 aa14.87□□□□□ -0.03
CHKB-201ENST00000406938 TMA7Q9Y2S6 64 aaKnown RBP14.87□□□□□ -0.03
CHKB-201ENST00000406938 UBE2CO00762 179 aa14.86□□□□□ -0.03
CHKB-201ENST00000406938 GNRH2O43555 120 aa14.86□□□□□ -0.03
CHKB-201ENST00000406938 DEFB135Q30KP9 77 aa14.86□□□□□ -0.03
CHKB-201ENST00000406938 ZNF705AQ6ZN79 300 aaPredicted RBP14.86□□□□□ -0.03
CHKB-201ENST00000406938 GTSF1Q8WW33 167 aa14.86□□□□□ -0.03
CHKB-201ENST00000406938 LINC00467Q9BRT7 94 aa14.86□□□□□ -0.03
CHKB-201ENST00000406938 SMIM27A0A1W2PRY6 76 aa14.85□□□□□ -0.03
CHKB-201ENST00000406938 CBY3A6NI87 242 aa14.85□□□□□ -0.03
CHKB-201ENST00000406938 PRM2P04554 102 aa14.85□□□□□ -0.03
CHKB-201ENST00000406938 GFRA4Q9GZZ7 299 aa14.85□□□□□ -0.03
CHKB-201ENST00000406938 SMCO4Q9NRQ5 59 aa14.85□□□□□ -0.03
CHKB-201ENST00000406938 URGCP-MRPS24S4R325 110 aa14.85□□□□□ -0.03
CHKB-201ENST00000406938 CXCL1P09341 107 aa14.84□□□□□ -0.03
CHKB-201ENST00000406938 ASIPP42127 132 aa14.84□□□□□ -0.03
CHKB-201ENST00000406938 CXorf65A6NEN9 183 aa14.84□□□□□ -0.03
CHKB-201ENST00000406938 HIGD1CA8MV81 97 aa14.84□□□□□ -0.03
CHKB-201ENST00000406938 IMMP2LQ96T52 175 aa14.84□□□□□ -0.03
CHKB-201ENST00000406938 TPPP3Q9BW30 176 aa14.84□□□□□ -0.03
CHKB-201ENST00000406938 TRGV11A0A075B6L2 103 aa14.83□□□□□ -0.04
CHKB-201ENST00000406938 FAM231BA6NCW3 169 aa14.83□□□□□ -0.04
CHKB-201ENST00000406938 IGLC6P0CF74 106 aa14.83□□□□□ -0.04
CHKB-201ENST00000406938 FAM3BP58499 235 aaPredicted RBP14.83□□□□□ -0.04
CHKB-201ENST00000406938 FER1L6-AS1Q8NA97 138 aa14.83□□□□□ -0.04
CHKB-201ENST00000406938 NAT8BQ9UHF3 227 aa14.83□□□□□ -0.04
CHKB-201ENST00000406938 IGHV3-16A0A0C4DH30 117 aa14.82□□□□□ -0.04
CHKB-201ENST00000406938 H3BVH4 76 aa14.82□□□□□ -0.04
CHKB-201ENST00000406938 S100A4P26447 101 aaKnown RBP14.82□□□□□ -0.04
CHKB-201ENST00000406938 DEFB121Q5J5C9 76 aa14.82□□□□□ -0.04
CHKB-201ENST00000406938 KCNIP4Q6PIL6 250 aa14.82□□□□□ -0.04
CHKB-201ENST00000406938 Q6ZWC4 215 aa14.82□□□□□ -0.04
CHKB-201ENST00000406938 S100PP25815 95 aa14.81□□□□□ -0.04
CHKB-201ENST00000406938 DNLZQ5SXM8 178 aa14.81□□□□□ -0.04
CHKB-201ENST00000406938 NUP35Q8NFH5 326 aa14.81□□□□□ -0.04
CHKB-201ENST00000406938 RCHY1Q96PM5 261 aa14.81□□□□□ -0.04
CHKB-201ENST00000406938 MDFICQ9P1T7 246 aa14.81□□□□□ -0.04
CHKB-201ENST00000406938 TIMM8BQ9Y5J9 83 aaPredicted RBP14.81□□□□□ -0.04
CHKB-201ENST00000406938 A0A1W2PPQ1 181 aa14.81□□□□□ -0.04
CHKB-201ENST00000406938 RNASE3P12724 160 aaKnown RBP14.81□□□□□ -0.04
CHKB-201ENST00000406938 AZU1P20160 251 aa14.81□□□□□ -0.04
CHKB-201ENST00000406938 FOXA3P55318 350 aaPredicted RBP14.81□□□□□ -0.04
CHKB-201ENST00000406938 PGLYRP4Q96LB8 373 aa14.81□□□□□ -0.04
CHKB-201ENST00000406938 ARMS2P0C7Q2 107 aa14.8□□□□□ -0.04
CHKB-201ENST00000406938 CTRLP40313 264 aa14.8□□□□□ -0.04
CHKB-201ENST00000406938 LYZL1Q6UWQ5 148 aa14.8□□□□□ -0.04
CHKB-201ENST00000406938 RNF183Q96D59 192 aa14.8□□□□□ -0.04
CHKB-201ENST00000406938 RRN3P1Q2M238 152 aa14.79□□□□□ -0.04
CHKB-201ENST00000406938 C11orf72Q8NBR9 251 aa14.79□□□□□ -0.04
CHKB-201ENST00000406938 RNASE8Q8TDE3 154 aaKnown RBP14.79□□□□□ -0.04
CHKB-201ENST00000406938 X6R8D5 127 aa14.79□□□□□ -0.04
CHKB-201ENST00000406938 MUC21A0A0G2JKD1 596 aa14.78□□□□□ -0.04
CHKB-201ENST00000406938 MUC21A0A140T8X8 626 aa14.78□□□□□ -0.04
CHKB-201ENST00000406938 SNAI2O43623 268 aa14.78□□□□□ -0.04
CHKB-201ENST00000406938 OR5AL1P0C617 328 aa14.78□□□□□ -0.04
CHKB-201ENST00000406938 MED14OSP0DP75 135 aa14.78□□□□□ -0.04
CHKB-201ENST00000406938 ZNF415Q09FC8 603 aa14.78□□□□□ -0.04
CHKB-201ENST00000406938 ELOBQ15370 118 aa14.78□□□□□ -0.04
CHKB-201ENST00000406938 TMEM263Q8WUH6 116 aaKnown RBP14.78□□□□□ -0.04
CHKB-201ENST00000406938 SSBP4Q9BWG4 385 aaPredicted RBP14.78□□□□□ -0.04
CHKB-201ENST00000406938 SPINK4O60575 86 aa14.77□□□□□ -0.04
CHKB-201ENST00000406938 MRAPQ8TCY5 172 aa14.77□□□□□ -0.04
CHKB-201ENST00000406938 C9orf85Q96MD7 179 aa14.77□□□□□ -0.04
CHKB-201ENST00000406938 YPEL4Q96NS1 127 aa14.77□□□□□ -0.04
CHKB-201ENST00000406938 SCRT2Q9NQ03 307 aa14.77□□□□□ -0.04
CHKB-201ENST00000406938 SPRY2O43597 315 aa14.77□□□□□ -0.05
CHKB-201ENST00000406938 SBSPONQ8IVN8 264 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms