RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 LINC01559Q495D7 138 aa15.49■□□□□ 0.07
CPNE1-204ENST00000397443 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-204ENST00000397443 A8MWL6 223 aa15.49■□□□□ 0.07
CPNE1-204ENST00000397443 SPINK4O60575 86 aa15.49■□□□□ 0.07
CPNE1-204ENST00000397443 KRTAP21-3Q3LHN1 58 aa15.49■□□□□ 0.07
CPNE1-204ENST00000397443 FAM159AQ6UWV7 190 aa15.49■□□□□ 0.07
CPNE1-204ENST00000397443 TSKUQ8WUA8 353 aa15.49■□□□□ 0.07
CPNE1-204ENST00000397443 NEU1Q99519 415 aa15.49■□□□□ 0.07
CPNE1-204ENST00000397443 LOC102724200A0A096LPH7 203 aaPredicted RBP15.48■□□□□ 0.07
CPNE1-204ENST00000397443 PRM2P04554 102 aa15.48■□□□□ 0.07
CPNE1-204ENST00000397443 SSTP61278 116 aa15.48■□□□□ 0.07
CPNE1-204ENST00000397443 GTSF1Q8WW33 167 aa15.48■□□□□ 0.07
CPNE1-204ENST00000397443 TMEM208Q9BTX3 173 aa15.48■□□□□ 0.07
CPNE1-204ENST00000397443 A0A1W2PPQ1 181 aa15.47■□□□□ 0.07
CPNE1-204ENST00000397443 GNRH2O43555 120 aa15.47■□□□□ 0.07
CPNE1-204ENST00000397443 S100PP25815 95 aa15.47■□□□□ 0.07
CPNE1-204ENST00000397443 CT83Q5H943 113 aa15.47■□□□□ 0.07
CPNE1-204ENST00000397443 ZNF575Q86XF7 245 aa15.47■□□□□ 0.07
CPNE1-204ENST00000397443 CSTL1Q9H114 145 aa15.47■□□□□ 0.07
CPNE1-204ENST00000397443 TP53TG3Q9ULZ0 132 aa15.47■□□□□ 0.07
CPNE1-204ENST00000397443 TIMM8BQ9Y5J9 83 aaPredicted RBP15.47■□□□□ 0.07
CPNE1-204ENST00000397443 HIGD1CA8MV81 97 aa15.47■□□□□ 0.07
CPNE1-204ENST00000397443 AMBPP02760 352 aa15.47■□□□□ 0.07
CPNE1-204ENST00000397443 MORN3Q6PF18 240 aaPredicted RBP15.47■□□□□ 0.07
CPNE1-204ENST00000397443 LINC01587Q99440 93 aa15.47■□□□□ 0.07
CPNE1-204ENST00000397443 DNAH3Q8TD57 4116 aa15.46■□□□□ 0.07
CPNE1-204ENST00000397443 NBEAL2Q6ZNJ1 2754 aa15.46■□□□□ 0.07
CPNE1-204ENST00000397443 MUC21A0A0G2JKD1 596 aa15.46■□□□□ 0.07
CPNE1-204ENST00000397443 MUC21A0A140T8X8 626 aa15.46■□□□□ 0.07
CPNE1-204ENST00000397443 SMIM27A0A1W2PRY6 76 aa15.46■□□□□ 0.07
CPNE1-204ENST00000397443 XKRY2A2RUG3 117 aa15.46■□□□□ 0.07
CPNE1-204ENST00000397443 CXorf65A6NEN9 183 aa15.46■□□□□ 0.07
CPNE1-204ENST00000397443 KCNIP4Q6PIL6 250 aa15.46■□□□□ 0.07
CPNE1-204ENST00000397443 PGLYRP4Q96LB8 373 aa15.46■□□□□ 0.07
CPNE1-204ENST00000397443 TGIF2-C20orf24A0A0A6YYL0 155 aa15.45■□□□□ 0.06
CPNE1-204ENST00000397443 ELOBQ15370 118 aa15.45■□□□□ 0.06
CPNE1-204ENST00000397443 IGHV1OR15-1A0A075B7D0 117 aa15.45■□□□□ 0.06
CPNE1-204ENST00000397443 RPS20P60866 119 aaKnown RBP15.45■□□□□ 0.06
CPNE1-204ENST00000397443 C1orf158Q8N1D5 194 aa15.45■□□□□ 0.06
CPNE1-204ENST00000397443 SPRY2O43597 315 aa15.44■□□□□ 0.06
CPNE1-204ENST00000397443 TYMSP04818 313 aa15.44■□□□□ 0.06
CPNE1-204ENST00000397443 NUP35Q8NFH5 326 aa15.44■□□□□ 0.06
CPNE1-204ENST00000397443 C1QTNF4Q9BXJ3 329 aa15.44■□□□□ 0.06
CPNE1-204ENST00000397443 CBY3A6NI87 242 aa15.43■□□□□ 0.06
CPNE1-204ENST00000397443 S100A4P26447 101 aaKnown RBP15.43■□□□□ 0.06
CPNE1-204ENST00000397443 NAT8BQ9UHF3 227 aa15.43■□□□□ 0.06
CPNE1-204ENST00000397443 H3BVH4 76 aa15.43■□□□□ 0.06
CPNE1-204ENST00000397443 KCNS1Q96KK3 526 aa15.43■□□□□ 0.06
CPNE1-204ENST00000397443 IMMP2LQ96T52 175 aa15.43■□□□□ 0.06
CPNE1-204ENST00000397443 CXCL1P09341 107 aa15.42■□□□□ 0.06
CPNE1-204ENST00000397443 FER1L6-AS1Q8NA97 138 aa15.42■□□□□ 0.06
CPNE1-204ENST00000397443 ASIPP42127 132 aa15.41■□□□□ 0.06
CPNE1-204ENST00000397443 APOC4P55056 127 aa15.41■□□□□ 0.06
CPNE1-204ENST00000397443 MRPL54Q6P161 138 aaKnown RBP15.41■□□□□ 0.06
CPNE1-204ENST00000397443 LYZL1Q6UWQ5 148 aa15.41■□□□□ 0.06
CPNE1-204ENST00000397443 CSNK1G2-AS1Q8NCQ2 148 aa15.41■□□□□ 0.06
CPNE1-204ENST00000397443 GFRA4Q9GZZ7 299 aa15.41■□□□□ 0.06
CPNE1-204ENST00000397443 YPEL4Q96NS1 127 aa15.41■□□□□ 0.06
CPNE1-204ENST00000397443 PYGO2Q9BRQ0 406 aa15.41■□□□□ 0.06
CPNE1-204ENST00000397443 GOLT1BQ9Y3E0 138 aa15.41■□□□□ 0.06
CPNE1-204ENST00000397443 DEFB135Q30KP9 77 aa15.4■□□□□ 0.06
CPNE1-204ENST00000397443 C20orf144Q9BQM9 153 aa15.4■□□□□ 0.06
CPNE1-204ENST00000397443 MDFICQ9P1T7 246 aa15.4■□□□□ 0.06
CPNE1-204ENST00000397443 ARMS2P0C7Q2 107 aa15.39■□□□□ 0.05
CPNE1-204ENST00000397443 FRMD6-AS1P0C7T7 363 aa15.39■□□□□ 0.05
CPNE1-204ENST00000397443 TDRG1Q3Y452 100 aa15.39■□□□□ 0.05
CPNE1-204ENST00000397443 IGLC6P0CF74 106 aa15.39■□□□□ 0.05
CPNE1-204ENST00000397443 BTF3L4Q96K17 158 aa15.39■□□□□ 0.05
CPNE1-204ENST00000397443 KIR2DL5BA0A0G2JN68 375 aa15.38■□□□□ 0.05
CPNE1-204ENST00000397443 KIR2DL5BA0A0G2JPC4 375 aa15.38■□□□□ 0.05
CPNE1-204ENST00000397443 FAM231BA6NCW3 169 aa15.38■□□□□ 0.05
CPNE1-204ENST00000397443 COLCA2A8K830 154 aa15.38■□□□□ 0.05
CPNE1-204ENST00000397443 KIR2DL5AQ8N109 375 aa15.38■□□□□ 0.05
CPNE1-204ENST00000397443 KIR2DL5BQ8NHK3 375 aa15.38■□□□□ 0.05
CPNE1-204ENST00000397443 AZU1P20160 251 aa15.37■□□□□ 0.05
CPNE1-204ENST00000397443 KPRPQ5T749 579 aaPredicted RBP15.37■□□□□ 0.05
CPNE1-204ENST00000397443 TMEM256Q8N2U0 113 aa15.37■□□□□ 0.05
CPNE1-204ENST00000397443 OR10AG1Q8NH19 301 aa15.37■□□□□ 0.05
CPNE1-204ENST00000397443 IGHV3-16A0A0C4DH30 117 aa15.37■□□□□ 0.05
CPNE1-204ENST00000397443 RNASE3P12724 160 aaKnown RBP15.37■□□□□ 0.05
CPNE1-204ENST00000397443 FOXA3P55318 350 aaPredicted RBP15.37■□□□□ 0.05
CPNE1-204ENST00000397443 FAM210BQ96KR6 192 aa15.37■□□□□ 0.05
CPNE1-204ENST00000397443 TRGV11A0A075B6L2 103 aa15.36■□□□□ 0.05
CPNE1-204ENST00000397443 K7EIL1 84 aa15.36■□□□□ 0.05
CPNE1-204ENST00000397443 CAMPP49913 170 aa15.36■□□□□ 0.05
CPNE1-204ENST00000397443 DEFB121Q5J5C9 76 aa15.36■□□□□ 0.05
CPNE1-204ENST00000397443 BORCS7Q96B45 105 aa15.35■□□□□ 0.05
CPNE1-204ENST00000397443 TRBV24-1A0A075B6N3 115 aa15.35■□□□□ 0.05
CPNE1-204ENST00000397443 A0A1B0GUT8 65 aa15.35■□□□□ 0.05
CPNE1-204ENST00000397443 ZNF705AQ6ZN79 300 aaPredicted RBP15.35■□□□□ 0.05
CPNE1-204ENST00000397443 GSN-AS1Q9NRJ2 163 aa15.35■□□□□ 0.05
CPNE1-204ENST00000397443 PHLDA3Q9Y5J5 127 aa15.35■□□□□ 0.05
CPNE1-204ENST00000397443 MUC4Q99102 2169 aa15.34■□□□□ 0.05
CPNE1-204ENST00000397443 M0R381 172 aa15.34■□□□□ 0.05
CPNE1-204ENST00000397443 CTRLP40313 264 aa15.34■□□□□ 0.05
CPNE1-204ENST00000397443 RAB4BP61018 213 aa15.33■□□□□ 0.05
CPNE1-204ENST00000397443 TWIST1Q15672 202 aa15.33■□□□□ 0.05
CPNE1-204ENST00000397443 SPANXN1Q5VSR9 72 aa15.33■□□□□ 0.05
CPNE1-204ENST00000397443 MSRB1Q9NZV6 116 aa15.33■□□□□ 0.05
CPNE1-204ENST00000397443 TRAV9-1A0A075B6T8 112 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms