RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 TDRG1Q3Y452 100 aa17.21■□□□□ 0.34
TSPAN4-202ENST00000397396 PKD1L1Q8TDX9 2849 aa17.19■□□□□ 0.34
TSPAN4-202ENST00000397396 LINC01587Q99440 93 aa17.19■□□□□ 0.34
TSPAN4-202ENST00000397396 TRGV11A0A075B6L2 103 aa17.18■□□□□ 0.34
TSPAN4-202ENST00000397396 FAM231BA6NCW3 169 aa17.18■□□□□ 0.34
TSPAN4-202ENST00000397396 FRMD6-AS1P0C7T7 363 aa17.18■□□□□ 0.34
TSPAN4-202ENST00000397396 ANXA2RQ3ZCQ2 193 aa17.18■□□□□ 0.34
TSPAN4-202ENST00000397396 Q6ZWC4 215 aa17.18■□□□□ 0.34
TSPAN4-202ENST00000397396 CSNK1G2-AS1Q8NCQ2 148 aa17.18■□□□□ 0.34
TSPAN4-202ENST00000397396 TSKUQ8WUA8 353 aa17.18■□□□□ 0.34
TSPAN4-202ENST00000397396 GFRA4Q9GZZ7 299 aa17.18■□□□□ 0.34
TSPAN4-202ENST00000397396 IGKV3D-20A0A0C4DH25 116 aa17.17■□□□□ 0.34
TSPAN4-202ENST00000397396 RBMY1A1P0DJD3 496 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-202ENST00000397396 RBMY1CP0DJD4 496 aa17.17■□□□□ 0.34
TSPAN4-202ENST00000397396 RBMY1FQ15415 496 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-202ENST00000397396 MUC21Q5SSG8 566 aa17.17■□□□□ 0.34
TSPAN4-202ENST00000397396 C1orf158Q8N1D5 194 aa17.17■□□□□ 0.34
TSPAN4-202ENST00000397396 IMMP2LQ96T52 175 aa17.17■□□□□ 0.34
TSPAN4-202ENST00000397396 C11orf21Q9P2W6 132 aa17.17■□□□□ 0.34
TSPAN4-202ENST00000397396 CXorf65A6NEN9 183 aa17.16■□□□□ 0.34
TSPAN4-202ENST00000397396 K7EIL1 84 aa17.16■□□□□ 0.34
TSPAN4-202ENST00000397396 ASIPP42127 132 aa17.16■□□□□ 0.34
TSPAN4-202ENST00000397396 IL36BQ9NZH7 164 aa17.16■□□□□ 0.34
TSPAN4-202ENST00000397396 TMSB15BA0A087X1C1 80 aa17.15■□□□□ 0.34
TSPAN4-202ENST00000397396 A0A1W2PPQ1 181 aa17.15■□□□□ 0.34
TSPAN4-202ENST00000397396 CBY3A6NI87 242 aa17.15■□□□□ 0.34
TSPAN4-202ENST00000397396 S100PP25815 95 aa17.15■□□□□ 0.34
TSPAN4-202ENST00000397396 RPL19P84098 196 aaKnown RBP17.15■□□□□ 0.34
TSPAN4-202ENST00000397396 KCNIP4Q6PIL6 250 aa17.15■□□□□ 0.34
TSPAN4-202ENST00000397396 ZNF705AQ6ZN79 300 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-202ENST00000397396 Q6ZQT7 251 aa17.15■□□□□ 0.34
TSPAN4-202ENST00000397396 PRB2P02812 416 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-202ENST00000397396 MED14OSP0DP75 135 aa17.14■□□□□ 0.33
TSPAN4-202ENST00000397396 S100A4P26447 101 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-202ENST00000397396 DNLZQ5SXM8 178 aa17.14■□□□□ 0.33
TSPAN4-202ENST00000397396 RCHY1Q96PM5 261 aa17.14■□□□□ 0.33
TSPAN4-202ENST00000397396 IGHV3OR16-12A0A075B7B8 117 aa17.13■□□□□ 0.33
TSPAN4-202ENST00000397396 TYMSP04818 313 aa17.13■□□□□ 0.33
TSPAN4-202ENST00000397396 ATRAIDQ6UW56 229 aa17.13■□□□□ 0.33
TSPAN4-202ENST00000397396 NEU1Q99519 415 aa17.13■□□□□ 0.33
TSPAN4-202ENST00000397396 NAT8BQ9UHF3 227 aa17.13■□□□□ 0.33
TSPAN4-202ENST00000397396 TP53TG1Q9Y2A0 90 aa17.13■□□□□ 0.33
TSPAN4-202ENST00000397396 SMIM27A0A1W2PRY6 76 aa17.12■□□□□ 0.33
TSPAN4-202ENST00000397396 SMIM9A6NGZ8 99 aa17.12■□□□□ 0.33
TSPAN4-202ENST00000397396 SMCO4Q9NRQ5 59 aa17.12■□□□□ 0.33
TSPAN4-202ENST00000397396 ZNF415Q09FC8 603 aa17.11■□□□□ 0.33
TSPAN4-202ENST00000397396 DEFB135Q30KP9 77 aa17.11■□□□□ 0.33
TSPAN4-202ENST00000397396 DEFB121Q5J5C9 76 aa17.11■□□□□ 0.33
TSPAN4-202ENST00000397396 ZNF493Q6ZR52 646 aa17.11■□□□□ 0.33
TSPAN4-202ENST00000397396 FER1L6-AS1Q8NA97 138 aa17.11■□□□□ 0.33
TSPAN4-202ENST00000397396 TRAV9-1A0A075B6T8 112 aa17.1■□□□□ 0.33
TSPAN4-202ENST00000397396 F2Z2F3 143 aa17.1■□□□□ 0.33
TSPAN4-202ENST00000397396 HTN1P15515 57 aa17.1■□□□□ 0.33
TSPAN4-202ENST00000397396 FOXA3P55318 350 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-202ENST00000397396 RRN3P1Q2M238 152 aa17.1■□□□□ 0.33
TSPAN4-202ENST00000397396 TMEM263Q8WUH6 116 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-202ENST00000397396 RNF183Q96D59 192 aa17.1■□□□□ 0.33
TSPAN4-202ENST00000397396 BTF3L4Q96K17 158 aa17.1■□□□□ 0.33
TSPAN4-202ENST00000397396 GRIFINA4D1Z8 144 aa17.09■□□□□ 0.33
TSPAN4-202ENST00000397396 BORCS7Q96B45 105 aa17.09■□□□□ 0.33
TSPAN4-202ENST00000397396 C16orf74Q96GX8 76 aa17.09■□□□□ 0.33
TSPAN4-202ENST00000397396 DNAH3Q8TD57 4116 aa17.09■□□□□ 0.33
TSPAN4-202ENST00000397396 NOTCH1P46531 2555 aa17.09■□□□□ 0.33
TSPAN4-202ENST00000397396 IGHV3-16A0A0C4DH30 117 aa17.08■□□□□ 0.32
TSPAN4-202ENST00000397396 HIGD1CA8MV81 97 aa17.08■□□□□ 0.32
TSPAN4-202ENST00000397396 GNRH2O43555 120 aa17.08■□□□□ 0.32
TSPAN4-202ENST00000397396 IGLC6P0CF74 106 aa17.08■□□□□ 0.32
TSPAN4-202ENST00000397396 MRAPQ8TCY5 172 aa17.08■□□□□ 0.32
TSPAN4-202ENST00000397396 TP53TG3Q9ULZ0 132 aa17.08■□□□□ 0.32
TSPAN4-202ENST00000397396 SPRY2O43597 315 aa17.07■□□□□ 0.32
TSPAN4-202ENST00000397396 OR5AL1P0C617 328 aa17.07■□□□□ 0.32
TSPAN4-202ENST00000397396 GZMBP10144 247 aa17.07■□□□□ 0.32
TSPAN4-202ENST00000397396 TCL1AP56279 114 aa17.07■□□□□ 0.32
TSPAN4-202ENST00000397396 H3BVH4 76 aa17.06■□□□□ 0.32
TSPAN4-202ENST00000397396 SNAI2O43623 268 aa17.06■□□□□ 0.32
TSPAN4-202ENST00000397396 CTRLP40313 264 aa17.06■□□□□ 0.32
TSPAN4-202ENST00000397396 GTSF1Q8WW33 167 aa17.06■□□□□ 0.32
TSPAN4-202ENST00000397396 TPPP3Q9BW30 176 aa17.06■□□□□ 0.32
TSPAN4-202ENST00000397396 ARMS2P0C7Q2 107 aa17.05■□□□□ 0.32
TSPAN4-202ENST00000397396 MIFP14174 115 aa17.05■□□□□ 0.32
TSPAN4-202ENST00000397396 ZNF575Q86XF7 245 aa17.05■□□□□ 0.32
TSPAN4-202ENST00000397396 OR11H2Q8NH07 326 aa17.05■□□□□ 0.32
TSPAN4-202ENST00000397396 RNASE8Q8TDE3 154 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-202ENST00000397396 SPXQ9BT56 116 aa17.05■□□□□ 0.32
TSPAN4-202ENST00000397396 SSBP4Q9BWG4 385 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-202ENST00000397396 SNURFLB1AK76 121 aa17.04■□□□□ 0.32
TSPAN4-202ENST00000397396 RNASE3P12724 160 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-202ENST00000397396 CACNG7P62955 275 aa17.04■□□□□ 0.32
TSPAN4-202ENST00000397396 WDR73Q6P4I2 378 aa17.04■□□□□ 0.32
TSPAN4-202ENST00000397396 NUP35Q8NFH5 326 aa17.04■□□□□ 0.32
TSPAN4-202ENST00000397396 C9orf85Q96MD7 179 aa17.04■□□□□ 0.32
TSPAN4-202ENST00000397396 SPATA25Q9BR10 227 aa17.04■□□□□ 0.32
TSPAN4-202ENST00000397396 PHLDA3Q9Y5J5 127 aa17.04■□□□□ 0.32
TSPAN4-202ENST00000397396 NBEAL1Q6ZS30 2694 aa17.04■□□□□ 0.32
TSPAN4-202ENST00000397396 LYZL1Q6UWQ5 148 aa17.03■□□□□ 0.32
TSPAN4-202ENST00000397396 ATP5L2Q7Z4Y8 100 aa17.03■□□□□ 0.32
TSPAN4-202ENST00000397396 PGLYRP4Q96LB8 373 aa17.03■□□□□ 0.32
TSPAN4-202ENST00000397396 SCRT2Q9NQ03 307 aa17.03■□□□□ 0.32
TSPAN4-202ENST00000397396 URGCP-MRPS24S4R325 110 aa17.03■□□□□ 0.32
TSPAN4-202ENST00000397396 X6R8D5 127 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms