RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 KLHL30-AS1Q8NEE0 82 aa14.83□□□□□ -0.04
CSPG5-202ENST00000383738 OOSP1A8MZH6 123 aa14.83□□□□□ -0.04
CSPG5-202ENST00000383738 MSRB1Q9NZV6 116 aa14.83□□□□□ -0.04
CSPG5-202ENST00000383738 MRPL35Q9NZE8 188 aaKnown RBP14.82□□□□□ -0.04
CSPG5-202ENST00000383738 TRAV2A0A0B4J234 112 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 LTAP01374 205 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 IGLV2-8P01709 118 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 Q8N7P7 452 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 FAM167A-AS1Q96KT0 104 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 IGF2BP2-AS1Q96M15 143 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 NXT2Q9NPJ8 142 aaKnown RBP14.81□□□□□ -0.04
CSPG5-202ENST00000383738 FCN3O75636 299 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 HOXB4P17483 251 aaPredicted RBP14.81□□□□□ -0.04
CSPG5-202ENST00000383738 TRAV12-3A0A0B4J271 114 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 IGKV3D-20A0A0C4DH25 116 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 NPIPB6E9PJ23 425 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 TMEM249Q2WGJ8 235 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 FAM104BQ5XKR9 115 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 VGLL1Q99990 258 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 CENPVL3A0A0U1RRI6 287 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 HLA-DMBP28068 263 aa14.81□□□□□ -0.04
CSPG5-202ENST00000383738 A0A1B0GW15 77 aa14.8□□□□□ -0.04
CSPG5-202ENST00000383738 RNF5Q99942 180 aa14.8□□□□□ -0.04
CSPG5-202ENST00000383738 F8P00451 2351 aa14.8□□□□□ -0.04
CSPG5-202ENST00000383738 LINC01549A6NIU2 74 aa14.8□□□□□ -0.04
CSPG5-202ENST00000383738 TNFRSF6BO95407 300 aa14.8□□□□□ -0.04
CSPG5-202ENST00000383738 CHTOPQ9Y3Y2 248 aaKnown RBP14.8□□□□□ -0.04
CSPG5-202ENST00000383738 LINC00311Q8N616 119 aa14.8□□□□□ -0.04
CSPG5-202ENST00000383738 FBXL19-AS1Q494R0 122 aa14.79□□□□□ -0.04
CSPG5-202ENST00000383738 ATP6V0BQ99437 205 aa14.79□□□□□ -0.04
CSPG5-202ENST00000383738 TRGV9Q99603 122 aa14.79□□□□□ -0.04
CSPG5-202ENST00000383738 KLF5Q13887 457 aaPredicted RBP14.79□□□□□ -0.04
CSPG5-202ENST00000383738 DEFB136Q30KP8 78 aa14.79□□□□□ -0.04
CSPG5-202ENST00000383738 HIST2H2BDQ6DRA6 164 aa14.79□□□□□ -0.04
CSPG5-202ENST00000383738 RHPN1-AS1Q9BWJ2 59 aa14.79□□□□□ -0.04
CSPG5-202ENST00000383738 SIGLEC15Q6ZMC9 328 aa14.78□□□□□ -0.04
CSPG5-202ENST00000383738 ATRQ13535 2644 aa14.78□□□□□ -0.04
CSPG5-202ENST00000383738 IGKV3OR2-268A0A0C4DH90 116 aa14.78□□□□□ -0.04
CSPG5-202ENST00000383738 A8MWV9 139 aa14.77□□□□□ -0.04
CSPG5-202ENST00000383738 NEGR1Q7Z3B1 354 aa14.77□□□□□ -0.04
CSPG5-202ENST00000383738 Q8N976 141 aa14.77□□□□□ -0.04
CSPG5-202ENST00000383738 ZZEF1O43149 2961 aa14.77□□□□□ -0.04
CSPG5-202ENST00000383738 HELZ2Q9BYK8 2649 aaKnown RBP14.77□□□□□ -0.04
CSPG5-202ENST00000383738 ZNF56Q15929 161 aa14.77□□□□□ -0.04
CSPG5-202ENST00000383738 C14orf178Q8N769 122 aaPredicted RBP14.77□□□□□ -0.04
CSPG5-202ENST00000383738 C10orf105Q8TEF2 133 aa14.77□□□□□ -0.05
CSPG5-202ENST00000383738 NCOR1P1Q9H4R4 102 aa14.77□□□□□ -0.05
CSPG5-202ENST00000383738 PPBPP02775 128 aa14.76□□□□□ -0.05
CSPG5-202ENST00000383738 P0C879 139 aa14.76□□□□□ -0.05
CSPG5-202ENST00000383738 ZNF843Q8N446 348 aa14.76□□□□□ -0.05
CSPG5-202ENST00000383738 CD7P09564 240 aa14.76□□□□□ -0.05
CSPG5-202ENST00000383738 SRSF1Q07955 248 aaKnown RBP eCLIP14.76□□□□□ -0.05
CSPG5-202ENST00000383738 CRXO43186 299 aaPredicted RBP14.75□□□□□ -0.05
CSPG5-202ENST00000383738 LAGE3Q14657 143 aa14.75□□□□□ -0.05
CSPG5-202ENST00000383738 HTN3P15516 51 aa14.75□□□□□ -0.05
CSPG5-202ENST00000383738 GAGE2BQ13066 116 aa14.75□□□□□ -0.05
CSPG5-202ENST00000383738 DEFB113Q30KQ7 82 aa14.75□□□□□ -0.05
CSPG5-202ENST00000383738 GAGE2EQ4V326 116 aa14.75□□□□□ -0.05
CSPG5-202ENST00000383738 LINC01545Q5VT33 79 aa14.75□□□□□ -0.05
CSPG5-202ENST00000383738 WIPF2Q8TF74 440 aaPredicted RBP14.75□□□□□ -0.05
CSPG5-202ENST00000383738 KIR2DL4Q99706 377 aa14.75□□□□□ -0.05
CSPG5-202ENST00000383738 GAGE2DQ9UEU5 116 aa14.75□□□□□ -0.05
CSPG5-202ENST00000383738 MUC3AQ02505 3323 aa14.75□□□□□ -0.05
CSPG5-202ENST00000383738 PAX1P15863 534 aa14.75□□□□□ -0.05
CSPG5-202ENST00000383738 TEP1Q99973 2627 aaKnown RBP14.75□□□□□ -0.05
CSPG5-202ENST00000383738 TRBV25-1A0A075B6N4 114 aa14.74□□□□□ -0.05
CSPG5-202ENST00000383738 RRN3P1Q2M238 152 aa14.74□□□□□ -0.05
CSPG5-202ENST00000383738 DTX2Q86UW9 622 aa14.74□□□□□ -0.05
CSPG5-202ENST00000383738 IGLV1-47P01700 117 aa14.74□□□□□ -0.05
CSPG5-202ENST00000383738 LINC01587Q99440 93 aa14.74□□□□□ -0.05
CSPG5-202ENST00000383738 SS18L2Q9UHA2 77 aa14.74□□□□□ -0.05
CSPG5-202ENST00000383738 MAST4O15021 2626 aa14.74□□□□□ -0.05
CSPG5-202ENST00000383738 TRAV26-1A0A087WT03 109 aa14.74□□□□□ -0.05
CSPG5-202ENST00000383738 DLX4Q92988 240 aaPredicted RBP14.74□□□□□ -0.05
CSPG5-202ENST00000383738 TRBV20-1A0A075B6N2 111 aa14.74□□□□□ -0.05
CSPG5-202ENST00000383738 A0A1W2PPR1 153 aa14.74□□□□□ -0.05
CSPG5-202ENST00000383738 LGALS9BQ3B8N2 356 aa14.74□□□□□ -0.05
CSPG5-202ENST00000383738 LGALS9CQ6DKI2 356 aa14.74□□□□□ -0.05
CSPG5-202ENST00000383738 COL4A2P08572 1712 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 TRBV19A0A075B6N1 114 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 C9JAW5 83 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 LINC01548A6NM66 108 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 UBE2E2Q96LR5 201 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 ZNF492Q9P255 531 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 FNDC10F2Z333 226 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 G3V4G9 280 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 TSPAN13O95857 204 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 HLA-DRB4P13762 266 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 ZFAND6Q6FIF0 208 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 DYNAPQ8N1N2 210 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 GFRA4Q9GZZ7 299 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 HLA-DRB4X5D2U9 266 aa14.73□□□□□ -0.05
CSPG5-202ENST00000383738 COX6CP09669 75 aa14.72□□□□□ -0.05
CSPG5-202ENST00000383738 PTH2Q96A98 100 aa14.72□□□□□ -0.05
CSPG5-202ENST00000383738 CFAP47Q6ZTR5 3102 aa14.72□□□□□ -0.05
CSPG5-202ENST00000383738 B5MCH6 92 aa14.72□□□□□ -0.05
CSPG5-202ENST00000383738 DMXL1Q9Y485 3027 aa14.72□□□□□ -0.05
CSPG5-202ENST00000383738 LMO4P61968 165 aa14.71□□□□□ -0.05
CSPG5-202ENST00000383738 ATMQ13315 3056 aa14.71□□□□□ -0.05
CSPG5-202ENST00000383738 VWC2LB2RUY7 222 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms