RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 FSHBP01225 129 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 CT45A10P0DMU9 189 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 TRAV8-6A0A0B4J262 113 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 IGHV3-66A0A0C4DH42 116 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 EDN2P20800 178 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 ID1P41134 155 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 BRD3OSQ6XYD6 125 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 MAP1LC3CQ9BXW4 147 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 MUC4Q99102 2169 aa7.25□□□□□ -1.25
TRIM39-202ENST00000376659 MUC21A0A0G2JKD1 596 aa7.25□□□□□ -1.25
TRIM39-202ENST00000376659 MUC21A0A140T8X8 626 aa7.25□□□□□ -1.25
TRIM39-202ENST00000376659 FABP5P3A8MUU1 101 aa7.25□□□□□ -1.25
TRIM39-202ENST00000376659 NDUFA4O00483 81 aa7.25□□□□□ -1.25
TRIM39-202ENST00000376659 MUC21Q5SSG8 566 aa7.25□□□□□ -1.25
TRIM39-202ENST00000376659 OR10AG1Q8NH19 301 aa7.25□□□□□ -1.25
TRIM39-202ENST00000376659 LENEPQ9Y5L5 61 aa7.25□□□□□ -1.25
TRIM39-202ENST00000376659 TRAV40A0A0B4J280 105 aa7.25□□□□□ -1.25
TRIM39-202ENST00000376659 SMIM20Q8N5G0 67 aa7.25□□□□□ -1.25
TRIM39-202ENST00000376659 HHLA3Q9XRX5 114 aa7.25□□□□□ -1.25
TRIM39-202ENST00000376659 MAP1AP78559 2803 aaPredicted RBP7.25□□□□□ -1.25
TRIM39-202ENST00000376659 CSN3P07498 182 aa7.24□□□□□ -1.25
TRIM39-202ENST00000376659 HSD52Q0P140 79 aa7.24□□□□□ -1.25
TRIM39-202ENST00000376659 MYOZ3Q8TDC0 251 aa7.24□□□□□ -1.25
TRIM39-202ENST00000376659 KLK15Q9H2R5 256 aa7.24□□□□□ -1.25
TRIM39-202ENST00000376659 PEF1Q9UBV8 284 aaKnown RBP7.24□□□□□ -1.25
TRIM39-202ENST00000376659 GATA1P15976 413 aaPredicted RBP7.24□□□□□ -1.25
TRIM39-202ENST00000376659 ATP5G2Q06055 141 aa7.24□□□□□ -1.25
TRIM39-202ENST00000376659 ADAMTSL5Q6ZMM2 481 aa7.24□□□□□ -1.25
TRIM39-202ENST00000376659 ZNF207O43670 478 aaKnown RBP7.23□□□□□ -1.25
TRIM39-202ENST00000376659 SRSF1Q07955 248 aaKnown RBP eCLIP7.23□□□□□ -1.25
TRIM39-202ENST00000376659 LCNL1Q6ZST4 164 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 PMCHL2Q9BQD1 86 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 PIMREGQ9BSJ6 248 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 IGHV3OR16-10A0A075B7F0 116 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 SCGB2A1O75556 95 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 HBDP02042 147 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 GATA3P23771 443 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 C9orf139Q6ZV77 190 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 MRAP2Q96G30 205 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 METTL26Q96S19 204 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 PIEZO1Q92508 2521 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 TNFRSF6BO95407 300 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 PSMB8P28062 276 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 FXYD7P58549 80 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 TWIST1Q15672 202 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 CCL19Q99731 98 aa7.23□□□□□ -1.25
TRIM39-202ENST00000376659 USP9XQ93008 2570 aaPredicted RBP7.23□□□□□ -1.25
TRIM39-202ENST00000376659 ATP5J2P56134 94 aa7.22□□□□□ -1.25
TRIM39-202ENST00000376659 MTURNQ8N3F0 131 aa7.22□□□□□ -1.25
TRIM39-202ENST00000376659 LINC00527Q9UJ94 153 aa7.22□□□□□ -1.25
TRIM39-202ENST00000376659 TSSC4Q9Y5U2 329 aaPredicted RBP7.22□□□□□ -1.25
TRIM39-202ENST00000376659 KIF25-AS1Q9Y6Z4 181 aa7.22□□□□□ -1.25
TRIM39-202ENST00000376659 GAGE12HA6NDE8 117 aa7.22□□□□□ -1.25
TRIM39-202ENST00000376659 LINC00315P59091 139 aa7.22□□□□□ -1.25
TRIM39-202ENST00000376659 RNF152Q8N8N0 203 aa7.22□□□□□ -1.25
TRIM39-202ENST00000376659 DCANP1Q8TF63 244 aa7.22□□□□□ -1.25
TRIM39-202ENST00000376659 NCOR2Q9Y618 2525 aa7.22□□□□□ -1.25
TRIM39-202ENST00000376659 SPXQ9BT56 116 aa7.22□□□□□ -1.25
TRIM39-202ENST00000376659 TPPP3Q9BW30 176 aa7.22□□□□□ -1.25
TRIM39-202ENST00000376659 KLLNB2CW77 178 aa7.21□□□□□ -1.25
TRIM39-202ENST00000376659 MSMBP08118 114 aa7.21□□□□□ -1.25
TRIM39-202ENST00000376659 MED14OSP0DP75 135 aa7.21□□□□□ -1.25
TRIM39-202ENST00000376659 BLCAPP62952 87 aa7.21□□□□□ -1.25
TRIM39-202ENST00000376659 Q8N8P6 123 aa7.21□□□□□ -1.25
TRIM39-202ENST00000376659 USMG5Q96IX5 58 aa7.21□□□□□ -1.25
TRIM39-202ENST00000376659 FAM110AQ9BQ89 295 aa7.21□□□□□ -1.25
TRIM39-202ENST00000376659 TENM4Q6N022 2769 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 DOPEY1Q5JWR5 2465 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 IGHV3OR16-13A0A075B7E8 117 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 IGHV3-49A0A0A0MS15 119 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 IGHV3-74A0A0B4J1X5 117 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 LOC389332A0A1B0GUA5 103 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 H0Y8G0 127 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 RNASE3P12724 160 aaKnown RBP7.21□□□□□ -1.26
TRIM39-202ENST00000376659 FCER1GP30273 86 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 DEFB1P60022 68 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 SLC25A34Q6PIV7 304 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 FA2HQ7L5A8 372 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 CD5LO43866 347 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 HLA-DRB4P13762 266 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 NAA38Q9BRA0 125 aaKnown RBP7.21□□□□□ -1.26
TRIM39-202ENST00000376659 DKK2Q9UBU2 259 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 HLA-DRB4X5D2U9 266 aa7.21□□□□□ -1.26
TRIM39-202ENST00000376659 CREBBPQ92793 2442 aa7.2□□□□□ -1.26
TRIM39-202ENST00000376659 EVI2AP22794 236 aa7.2□□□□□ -1.26
TRIM39-202ENST00000376659 CD300EQ496F6 205 aaPredicted RBP7.2□□□□□ -1.26
TRIM39-202ENST00000376659 PRSS3P2Q8NHM4 247 aa7.2□□□□□ -1.26
TRIM39-202ENST00000376659 YAE1D1Q9NRH1 226 aa7.2□□□□□ -1.26
TRIM39-202ENST00000376659 USP24Q9UPU5 2620 aa7.2□□□□□ -1.26
TRIM39-202ENST00000376659 H3BUX3 64 aa7.2□□□□□ -1.26
TRIM39-202ENST00000376659 CKS2P33552 79 aa7.2□□□□□ -1.26
TRIM39-202ENST00000376659 NOTCH3Q9UM47 2321 aa7.2□□□□□ -1.26
TRIM39-202ENST00000376659 IGKV2D-26A0A0A0MRZ7 120 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 B5MCH6 92 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 CACNG7P62955 275 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 TCTEX1D4Q5JR98 221 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 C12orf54Q6X4T0 127 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 RASL10AQ92737 203 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 UFC1Q9Y3C8 167 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 TNFRSF18Q9Y5U5 241 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms