RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 HLA-DRB4P13762 266 aa12.47□□□□□ -0.41
PHGDH-202ENST00000369409 SNRPEP62304 92 aaKnown RBP12.47□□□□□ -0.41
PHGDH-202ENST00000369409 PRR31Q5SQ13 230 aa12.47□□□□□ -0.41
PHGDH-202ENST00000369409 HLA-DRB4X5D2U9 266 aa12.47□□□□□ -0.41
PHGDH-202ENST00000369409 CTRLP40313 264 aa12.46□□□□□ -0.41
PHGDH-202ENST00000369409 NDUFA6P56556 154 aa12.46□□□□□ -0.41
PHGDH-202ENST00000369409 SPINK13Q1W4C9 94 aa12.46□□□□□ -0.41
PHGDH-202ENST00000369409 ODF3L2Q3SX64 289 aa12.46□□□□□ -0.41
PHGDH-202ENST00000369409 BORCS7Q96B45 105 aa12.46□□□□□ -0.41
PHGDH-202ENST00000369409 SSBP4Q9BWG4 385 aaPredicted RBP12.46□□□□□ -0.41
PHGDH-202ENST00000369409 MUC21A0A0G2JKD1 596 aa12.46□□□□□ -0.42
PHGDH-202ENST00000369409 MUC21A0A140T8X8 626 aa12.46□□□□□ -0.42
PHGDH-202ENST00000369409 PCP4L1A6NKN8 68 aa12.46□□□□□ -0.42
PHGDH-202ENST00000369409 KRTAP24-1Q3LI83 254 aa12.46□□□□□ -0.42
PHGDH-202ENST00000369409 MUC21Q5SSG8 566 aa12.46□□□□□ -0.42
PHGDH-202ENST00000369409 AMTNQ6UX39 209 aa12.46□□□□□ -0.42
PHGDH-202ENST00000369409 SSTP61278 116 aa12.45□□□□□ -0.42
PHGDH-202ENST00000369409 SLAQ13239 276 aa12.45□□□□□ -0.42
PHGDH-202ENST00000369409 RIGQ13278 110 aa12.45□□□□□ -0.42
PHGDH-202ENST00000369409 LINC00469Q8N7U9 141 aa12.45□□□□□ -0.42
PHGDH-202ENST00000369409 TRAV12-2A0A075B6T6 113 aa12.44□□□□□ -0.42
PHGDH-202ENST00000369409 TRAV12-3A0A0B4J271 114 aa12.44□□□□□ -0.42
PHGDH-202ENST00000369409 C7orf71A4D174 169 aa12.44□□□□□ -0.42
PHGDH-202ENST00000369409 C5orf52A6NGY3 159 aa12.44□□□□□ -0.42
PHGDH-202ENST00000369409 H3BMM0 161 aa12.44□□□□□ -0.42
PHGDH-202ENST00000369409 CDKN1BP46527 198 aa12.44□□□□□ -0.42
PHGDH-202ENST00000369409 KIAA1644Q3SXP7 199 aa12.44□□□□□ -0.42
PHGDH-202ENST00000369409 GFI1BQ5VTD9 330 aa12.44□□□□□ -0.42
PHGDH-202ENST00000369409 APCSP02743 223 aa12.44□□□□□ -0.42
PHGDH-202ENST00000369409 TSPOP30536 169 aa12.44□□□□□ -0.42
PHGDH-202ENST00000369409 ANXA2RQ3ZCQ2 193 aa12.44□□□□□ -0.42
PHGDH-202ENST00000369409 RBMY1BA6NDE4 496 aaKnown RBP12.43□□□□□ -0.42
PHGDH-202ENST00000369409 RBMY1EA6NEQ0 496 aaKnown RBP12.43□□□□□ -0.42
PHGDH-202ENST00000369409 A8MTW9 85 aa12.43□□□□□ -0.42
PHGDH-202ENST00000369409 RBMY1DP0C7P1 496 aaKnown RBP12.43□□□□□ -0.42
PHGDH-202ENST00000369409 FXYD7P58549 80 aa12.43□□□□□ -0.42
PHGDH-202ENST00000369409 OR2K2Q8NGT1 345 aa12.43□□□□□ -0.42
PHGDH-202ENST00000369409 MAST4O15021 2626 aa12.43□□□□□ -0.42
PHGDH-202ENST00000369409 OR11H12B2RN74 326 aa12.42□□□□□ -0.42
PHGDH-202ENST00000369409 SPATA3Q8NHX4 192 aa12.42□□□□□ -0.42
PHGDH-202ENST00000369409 H3BVH4 76 aa12.42□□□□□ -0.42
PHGDH-202ENST00000369409 VWFP04275 2813 aa12.41□□□□□ -0.42
PHGDH-202ENST00000369409 A0A1B0GW15 77 aa12.41□□□□□ -0.42
PHGDH-202ENST00000369409 S100A8P05109 93 aa12.41□□□□□ -0.42
PHGDH-202ENST00000369409 F2Z2F3 143 aa12.4□□□□□ -0.42
PHGDH-202ENST00000369409 UBE2CO00762 179 aa12.4□□□□□ -0.42
PHGDH-202ENST00000369409 ZNF324O75467 553 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-202ENST00000369409 FAM159AQ6UWV7 190 aa12.4□□□□□ -0.42
PHGDH-202ENST00000369409 CNFNQ9BYD5 112 aa12.4□□□□□ -0.42
PHGDH-202ENST00000369409 CD7P09564 240 aa12.4□□□□□ -0.42
PHGDH-202ENST00000369409 NTF3P20783 257 aa12.4□□□□□ -0.42
PHGDH-202ENST00000369409 SRIP30626 198 aa12.4□□□□□ -0.42
PHGDH-202ENST00000369409 ASIPP42127 132 aa12.4□□□□□ -0.42
PHGDH-202ENST00000369409 TWIST1Q15672 202 aa12.4□□□□□ -0.42
PHGDH-202ENST00000369409 PRIMA1Q86XR5 153 aa12.4□□□□□ -0.42
PHGDH-202ENST00000369409 GATD1Q8NB37 220 aa12.4□□□□□ -0.42
PHGDH-202ENST00000369409 OR10AG1Q8NH19 301 aa12.4□□□□□ -0.42
PHGDH-202ENST00000369409 TIMM8BQ9Y5J9 83 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-202ENST00000369409 BEAN1Q3B7T3 259 aa12.39□□□□□ -0.43
PHGDH-202ENST00000369409 GNRH2O43555 120 aa12.38□□□□□ -0.43
PHGDH-202ENST00000369409 SNAI2O43623 268 aa12.38□□□□□ -0.43
PHGDH-202ENST00000369409 OR5AL1P0C617 328 aa12.38□□□□□ -0.43
PHGDH-202ENST00000369409 HOXA5P20719 270 aa12.38□□□□□ -0.43
PHGDH-202ENST00000369409 S100A4P26447 101 aaKnown RBP12.38□□□□□ -0.43
PHGDH-202ENST00000369409 STHQ8IWL8 128 aa12.38□□□□□ -0.43
PHGDH-202ENST00000369409 MSRB1Q9NZV6 116 aa12.38□□□□□ -0.43
PHGDH-202ENST00000369409 CRXO43186 299 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-202ENST00000369409 PDZD11Q5EBL8 140 aa12.38□□□□□ -0.43
PHGDH-202ENST00000369409 KCNS1Q96KK3 526 aa12.38□□□□□ -0.43
PHGDH-202ENST00000369409 WFDC10AQ9H1F0 79 aa12.38□□□□□ -0.43
PHGDH-202ENST00000369409 RBMY1A1P0DJD3 496 aaKnown RBP12.37□□□□□ -0.43
PHGDH-202ENST00000369409 RBMY1CP0DJD4 496 aa12.37□□□□□ -0.43
PHGDH-202ENST00000369409 RBMY1FQ15415 496 aaKnown RBP12.37□□□□□ -0.43
PHGDH-202ENST00000369409 COA6Q5JTJ3 125 aaKnown RBP12.37□□□□□ -0.43
PHGDH-202ENST00000369409 C9orf66Q5T8R8 295 aa12.37□□□□□ -0.43
PHGDH-202ENST00000369409 ZNF493Q6ZR52 646 aa12.37□□□□□ -0.43
PHGDH-202ENST00000369409 LOC102724200A0A096LPH7 203 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-202ENST00000369409 CMC4P56277 68 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-202ENST00000369409 C12orf57Q99622 126 aa12.36□□□□□ -0.43
PHGDH-202ENST00000369409 SPRY2O43597 315 aa12.36□□□□□ -0.43
PHGDH-202ENST00000369409 TDRG1Q3Y452 100 aa12.36□□□□□ -0.43
PHGDH-202ENST00000369409 SPANXN1Q5VSR9 72 aa12.36□□□□□ -0.43
PHGDH-202ENST00000369409 TRPT1Q86TN4 253 aaKnown RBP12.36□□□□□ -0.43
PHGDH-202ENST00000369409 HIST3H2BBQ8N257 126 aa12.36□□□□□ -0.43
PHGDH-202ENST00000369409 IGHV1OR15-1A0A075B7D0 117 aa12.35□□□□□ -0.43
PHGDH-202ENST00000369409 MED14OSP0DP75 135 aa12.35□□□□□ -0.43
PHGDH-202ENST00000369409 RNASE3P12724 160 aaKnown RBP12.35□□□□□ -0.43
PHGDH-202ENST00000369409 INSL3P51460 131 aa12.35□□□□□ -0.43
PHGDH-202ENST00000369409 DNLZQ5SXM8 178 aa12.35□□□□□ -0.43
PHGDH-202ENST00000369409 AMN1Q8IY45 258 aa12.35□□□□□ -0.43
PHGDH-202ENST00000369409 CLUHP3Q96NS8 147 aa12.35□□□□□ -0.43
PHGDH-202ENST00000369409 FAM110AQ9BQ89 295 aa12.35□□□□□ -0.43
PHGDH-202ENST00000369409 ALKBH7Q9BT30 221 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-202ENST00000369409 C19orf73Q9NVV2 129 aa12.35□□□□□ -0.43
PHGDH-202ENST00000369409 TP53TG3Q9ULZ0 132 aa12.35□□□□□ -0.43
PHGDH-202ENST00000369409 FBN1P35555 2871 aaKnown RBP12.34□□□□□ -0.43
PHGDH-202ENST00000369409 AKR1D1P51857 326 aa12.34□□□□□ -0.43
PHGDH-202ENST00000369409 CACNG7P62955 275 aa12.34□□□□□ -0.43
PHGDH-202ENST00000369409 MUC4Q99102 2169 aa12.34□□□□□ -0.43
PHGDH-202ENST00000369409 M0R381 172 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms