RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 CSPG4Q6UVK1 2322 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 PTPRQQ9UMZ3 2332 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 ZNF688P0C7X2 276 aa7.84□□□□□ -1.16
RNF40-202ENST00000357890 XGP55808 180 aa7.84□□□□□ -1.16
RNF40-202ENST00000357890 ODF1Q14990 250 aa7.84□□□□□ -1.16
RNF40-202ENST00000357890 ZFP2Q6ZN57 461 aa7.84□□□□□ -1.16
RNF40-202ENST00000357890 MLST8Q9BVC4 326 aa7.84□□□□□ -1.16
RNF40-202ENST00000357890 C21orf62Q9NYP8 219 aa7.84□□□□□ -1.16
RNF40-202ENST00000357890 TRBV19A0A075B6N1 114 aa7.83□□□□□ -1.16
RNF40-202ENST00000357890 NBR2O15453 112 aa7.83□□□□□ -1.16
RNF40-202ENST00000357890 SRSF1Q07955 248 aaKnown RBP eCLIP7.83□□□□□ -1.169e-10■□□□□ 8.7
RNF40-202ENST00000357890 KLRD1Q13241 179 aa7.83□□□□□ -1.16
RNF40-202ENST00000357890 MAPKAPK5-AS1Q8N8E1 139 aa7.83□□□□□ -1.16
RNF40-202ENST00000357890 MYMXA0A1B0GTQ4 84 aa7.83□□□□□ -1.16
RNF40-202ENST00000357890 RUSC1-AS1Q66K80 236 aa7.83□□□□□ -1.16
RNF40-202ENST00000357890 PRADC1Q9BSG0 188 aa7.83□□□□□ -1.16
RNF40-202ENST00000357890 C2CD3Q4AC94 2353 aa7.83□□□□□ -1.16
RNF40-202ENST00000357890 DMXL1Q9Y485 3027 aa7.83□□□□□ -1.16
RNF40-202ENST00000357890 H7C1H1 209 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 EGR2P11161 476 aaPredicted RBP7.82□□□□□ -1.16
RNF40-202ENST00000357890 PLNP26678 52 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 HLA-DMBP28068 263 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 NPC2P61916 151 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 PVRIGQ6DKI7 326 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 C10orf126Q8N4M7 172 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 KLHL30-AS1Q8NEE0 82 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 SPATA25Q9BR10 227 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 SHANK2-AS3Q9BTD1 123 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 PHLDA3Q9Y5J5 127 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 SETD2Q9BYW2 2564 aaPredicted RBP7.82□□□□□ -1.16
RNF40-202ENST00000357890 ARHGAP32A7KAX9 2087 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 IGF2RP11717 2491 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 IFITM1P13164 125 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 MEIG1Q5JSS6 88 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 VCX2Q9H322 139 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 IGKV1-17P01599 117 aa7.82□□□□□ -1.16
RNF40-202ENST00000357890 NTN5Q8WTR8 489 aaPredicted RBP7.82□□□□□ -1.16
RNF40-202ENST00000357890 TRAV12-3A0A0B4J271 114 aa7.81□□□□□ -1.16
RNF40-202ENST00000357890 CCL21O00585 134 aa7.81□□□□□ -1.16
RNF40-202ENST00000357890 FAM74A4Q5TZK3 123 aa7.81□□□□□ -1.16
RNF40-202ENST00000357890 RNF5Q99942 180 aa7.81□□□□□ -1.16
RNF40-202ENST00000357890 ACACBO00763 2458 aa7.81□□□□□ -1.16
RNF40-202ENST00000357890 SHISA9B4DS77 424 aa7.81□□□□□ -1.16
RNF40-202ENST00000357890 KALRNO60229 2985 aa7.81□□□□□ -1.16
RNF40-202ENST00000357890 ZNF56Q15929 161 aa7.81□□□□□ -1.16
RNF40-202ENST00000357890 PRR30Q53SZ7 412 aaPredicted RBP7.81□□□□□ -1.16
RNF40-202ENST00000357890 DTX2Q86UW9 622 aa7.81□□□□□ -1.16
RNF40-202ENST00000357890 ANKRD29Q8N6D5 301 aa7.81□□□□□ -1.16
RNF40-202ENST00000357890 OR11H6Q8NGC7 330 aa7.81□□□□□ -1.16
RNF40-202ENST00000357890 NCOR2Q9Y618 2525 aa7.8□□□□□ -1.16
RNF40-202ENST00000357890 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.8□□□□□ -1.16
RNF40-202ENST00000357890 HIGD1BQ9P298 99 aa7.8□□□□□ -1.16
RNF40-202ENST00000357890 ERG28Q9UKR5 140 aa7.8□□□□□ -1.16
RNF40-202ENST00000357890 SVEP1Q4LDE5 3571 aa7.8□□□□□ -1.16
RNF40-202ENST00000357890 TRBV7-9A0A0J9YWB2 115 aa7.8□□□□□ -1.16
RNF40-202ENST00000357890 SLC25A20O43772 301 aa7.8□□□□□ -1.16
RNF40-202ENST00000357890 GAS8-AS1O95177 125 aa7.8□□□□□ -1.16
RNF40-202ENST00000357890 ZNF672Q499Z4 452 aaPredicted RBP7.8□□□□□ -1.16
RNF40-202ENST00000357890 CRYGCP07315 174 aa7.8□□□□□ -1.16
RNF40-202ENST00000357890 TEN1Q86WV5 123 aa7.8□□□□□ -1.16
RNF40-202ENST00000357890 RNF182Q8N6D2 247 aa7.8□□□□□ -1.16
RNF40-202ENST00000357890 ZNF491Q8N8L2 437 aa7.8□□□□□ -1.16
RNF40-202ENST00000357890 SHISA2Q6UWI4 295 aa7.79□□□□□ -1.16
RNF40-202ENST00000357890 K7ENP7 123 aa7.79□□□□□ -1.16
RNF40-202ENST00000357890 COX6CP09669 75 aa7.79□□□□□ -1.16
RNF40-202ENST00000357890 MYCNOSP40205 109 aa7.79□□□□□ -1.16
RNF40-202ENST00000357890 KLRB1Q12918 225 aa7.79□□□□□ -1.16
RNF40-202ENST00000357890 C15orf53Q8NAA6 179 aa7.79□□□□□ -1.16
RNF40-202ENST00000357890 C7orf69Q9H7B7 122 aa7.79□□□□□ -1.16
RNF40-202ENST00000357890 SONP18583 2426 aaKnown RBP7.79□□□□□ -1.16
RNF40-202ENST00000357890 PRR25Q96S07 402 aa7.79□□□□□ -1.16
RNF40-202ENST00000357890 TMEM14CQ9P0S9 112 aa7.79□□□□□ -1.16
RNF40-202ENST00000357890 A0A096LNJ9 63 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 F8VRH5 84 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 IGLV1-47P01700 117 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 HTN1P15515 57 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 FAM159AQ6UWV7 190 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 C14orf178Q8N769 122 aaPredicted RBP7.78□□□□□ -1.16
RNF40-202ENST00000357890 I3L2K1 104 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 SIGLEC15Q6ZMC9 328 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 LYPD1Q8N2G4 141 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 Q8N8P6 123 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 C16orf92Q96LL3 132 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 TEX22C9J3V5 150 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 C5orf64Q2M2E5 130 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 C2orf82Q6UX34 121 aa7.78□□□□□ -1.16
RNF40-202ENST00000357890 A0A087WX48 190 aa7.77□□□□□ -1.17
RNF40-202ENST00000357890 K7EIM0 57 aa7.77□□□□□ -1.17
RNF40-202ENST00000357890 TAL2Q16559 108 aa7.77□□□□□ -1.17
RNF40-202ENST00000357890 TM2D2Q9BX73 214 aa7.77□□□□□ -1.17
RNF40-202ENST00000357890 ADGRG4Q8IZF6 3080 aa7.77□□□□□ -1.17
RNF40-202ENST00000357890 H3BRN7 92 aa7.77□□□□□ -1.17
RNF40-202ENST00000357890 CCDC179H3BU77 68 aa7.77□□□□□ -1.17
RNF40-202ENST00000357890 CRIP1P50238 77 aa7.77□□□□□ -1.17
RNF40-202ENST00000357890 TMEM190Q8WZ59 177 aa7.77□□□□□ -1.17
RNF40-202ENST00000357890 TRGV3P03979 118 aa7.77□□□□□ -1.17
RNF40-202ENST00000357890 MRPL23Q16540 153 aaKnown RBP7.77□□□□□ -1.17
RNF40-202ENST00000357890 IL17RELQ6ZVW7 336 aa7.77□□□□□ -1.17
RNF40-202ENST00000357890 PTPRBP23467 1997 aa7.77□□□□□ -1.17
RNF40-202ENST00000357890 A0A0U1RRA0 63 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms