RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TSKUQ8WUA8 353 aa10.63□□□□□ -0.71
NIPAL3-202ENST00000339255 PYGO2Q9BRQ0 406 aa10.63□□□□□ -0.71
NIPAL3-202ENST00000339255 GFRA4Q9GZZ7 299 aa10.63□□□□□ -0.71
NIPAL3-202ENST00000339255 LINC00467Q9BRT7 94 aa10.62□□□□□ -0.71
NIPAL3-202ENST00000339255 C11orf21Q9P2W6 132 aa10.62□□□□□ -0.71
NIPAL3-202ENST00000339255 NAGKQ9UJ70 344 aa10.62□□□□□ -0.71
NIPAL3-202ENST00000339255 GOLT1BQ9Y3E0 138 aa10.62□□□□□ -0.71
NIPAL3-202ENST00000339255 TMEM208Q9BTX3 173 aa10.61□□□□□ -0.71
NIPAL3-202ENST00000339255 SMCO4Q9NRQ5 59 aa10.61□□□□□ -0.71
NIPAL3-202ENST00000339255 IL36BQ9NZH7 164 aa10.61□□□□□ -0.71
NIPAL3-202ENST00000339255 IGHV1OR15-1A0A075B7D0 117 aa10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 IGKV3D-20A0A0C4DH25 116 aa10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 S100PP25815 95 aa10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 ANXA2RQ3ZCQ2 193 aa10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 KCNIP4Q6PIL6 250 aa10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 A0A1W2PPQ1 181 aa10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 SMIM27A0A1W2PRY6 76 aa10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 RBMY1A1P0DJD3 496 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 RBMY1CP0DJD4 496 aa10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 RPL19P84098 196 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 RBMY1FQ15415 496 aaKnown RBP10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 MUC21Q5SSG8 566 aa10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 Q6ZQT7 251 aa10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 CSNK1G2-AS1Q8NCQ2 148 aa10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 NAT8BQ9UHF3 227 aa10.6□□□□□ -0.71
NIPAL3-202ENST00000339255 TRGV11A0A075B6L2 103 aa10.59□□□□□ -0.71
NIPAL3-202ENST00000339255 TRAV9-1A0A075B6T8 112 aa10.59□□□□□ -0.71
NIPAL3-202ENST00000339255 DNLZQ5SXM8 178 aa10.59□□□□□ -0.71
NIPAL3-202ENST00000339255 Q6ZWC4 215 aa10.59□□□□□ -0.71
NIPAL3-202ENST00000339255 LINC01587Q99440 93 aa10.59□□□□□ -0.71
NIPAL3-202ENST00000339255 TMSB15BA0A087X1C1 80 aa10.58□□□□□ -0.72
NIPAL3-202ENST00000339255 MED14OSP0DP75 135 aa10.58□□□□□ -0.72
NIPAL3-202ENST00000339255 ASIPP42127 132 aa10.58□□□□□ -0.72
NIPAL3-202ENST00000339255 ZNF705AQ6ZN79 300 aaPredicted RBP10.58□□□□□ -0.72
NIPAL3-202ENST00000339255 C1orf158Q8N1D5 194 aa10.58□□□□□ -0.72
NIPAL3-202ENST00000339255 BTF3L4Q96K17 158 aa10.58□□□□□ -0.72
NIPAL3-202ENST00000339255 NEU1Q99519 415 aa10.58□□□□□ -0.72
NIPAL3-202ENST00000339255 HIGD1CA8MV81 97 aa10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 F2Z2F3 143 aa10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 FRMD6-AS1P0C7T7 363 aa10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 FOXA3P55318 350 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 CBLN2Q8IUK8 224 aa10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 CMYA5Q8N3K9 4069 aa10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 CBY3A6NI87 242 aa10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 TYMSP04818 313 aa10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 IGLC6P0CF74 106 aa10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 S100A4P26447 101 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 CTRLP40313 264 aa10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 TMEM88Q6PEY1 159 aa10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 FER1L6-AS1Q8NA97 138 aa10.57□□□□□ -0.72
NIPAL3-202ENST00000339255 IGHV3OR16-12A0A075B7B8 117 aa10.56□□□□□ -0.72
NIPAL3-202ENST00000339255 OR5AL1P0C617 328 aa10.56□□□□□ -0.72
NIPAL3-202ENST00000339255 GZMBP10144 247 aa10.56□□□□□ -0.72
NIPAL3-202ENST00000339255 TCL1AP56279 114 aa10.56□□□□□ -0.72
NIPAL3-202ENST00000339255 GTSF1Q8WW33 167 aa10.56□□□□□ -0.72
NIPAL3-202ENST00000339255 BORCS7Q96B45 105 aa10.56□□□□□ -0.72
NIPAL3-202ENST00000339255 GRIFINA4D1Z8 144 aa10.55□□□□□ -0.72
NIPAL3-202ENST00000339255 SMIM9A6NGZ8 99 aa10.55□□□□□ -0.72
NIPAL3-202ENST00000339255 K7EIL1 84 aa10.55□□□□□ -0.72
NIPAL3-202ENST00000339255 HTN1P15515 57 aa10.55□□□□□ -0.72
NIPAL3-202ENST00000339255 ZNF493Q6ZR52 646 aa10.55□□□□□ -0.72
NIPAL3-202ENST00000339255 ZNF575Q86XF7 245 aa10.55□□□□□ -0.72
NIPAL3-202ENST00000339255 TMEM263Q8WUH6 116 aaKnown RBP10.55□□□□□ -0.72
NIPAL3-202ENST00000339255 RCHY1Q96PM5 261 aa10.55□□□□□ -0.72
NIPAL3-202ENST00000339255 URGCP-MRPS24S4R325 110 aa10.55□□□□□ -0.72
NIPAL3-202ENST00000339255 IGHV3-16A0A0C4DH30 117 aa10.54□□□□□ -0.72
NIPAL3-202ENST00000339255 H3BVH4 76 aa10.54□□□□□ -0.72
NIPAL3-202ENST00000339255 SCO1O75880 301 aa10.54□□□□□ -0.72
NIPAL3-202ENST00000339255 ZNF415Q09FC8 603 aa10.54□□□□□ -0.72
NIPAL3-202ENST00000339255 DEFB135Q30KP9 77 aa10.54□□□□□ -0.72
NIPAL3-202ENST00000339255 NUP35Q8NFH5 326 aa10.54□□□□□ -0.72
NIPAL3-202ENST00000339255 SSBP4Q9BWG4 385 aaPredicted RBP10.54□□□□□ -0.72
NIPAL3-202ENST00000339255 TP53TG3Q9ULZ0 132 aa10.54□□□□□ -0.72
NIPAL3-202ENST00000339255 TP53TG1Q9Y2A0 90 aa10.54□□□□□ -0.72
NIPAL3-202ENST00000339255 GNRH2O43555 120 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 SNAI2O43623 268 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 PRB2P02812 416 aaPredicted RBP10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 RNASE3P12724 160 aaKnown RBP10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 FAM3BP58499 235 aaPredicted RBP10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 RRN3P1Q2M238 152 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 ATP5L2Q7Z4Y8 100 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 C16orf74Q96GX8 76 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 TPPP3Q9BW30 176 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 CNFNQ9BYD5 112 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 TRBV24-1A0A075B6N3 115 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 A0A1B0GUT8 65 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 ELOBQ15370 118 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 WDR73Q6P4I2 378 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 LYZL1Q6UWQ5 148 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 RNASE8Q8TDE3 154 aaKnown RBP10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 RNF183Q96D59 192 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 PGLYRP4Q96LB8 373 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 SCRT2Q9NQ03 307 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 MUC4Q99102 2169 aa10.53□□□□□ -0.72
NIPAL3-202ENST00000339255 NBEAL2Q6ZNJ1 2754 aa10.52□□□□□ -0.73
NIPAL3-202ENST00000339255 A0A1B0GW15 77 aa10.52□□□□□ -0.73
NIPAL3-202ENST00000339255 ARMS2P0C7Q2 107 aa10.52□□□□□ -0.73
NIPAL3-202ENST00000339255 CACNG7P62955 275 aa10.52□□□□□ -0.73
NIPAL3-202ENST00000339255 C9orf85Q96MD7 179 aa10.52□□□□□ -0.73
NIPAL3-202ENST00000339255 PHLDA3Q9Y5J5 127 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms