RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 NAV2Q8IVL1 2488 aa11.28□□□□□ -0.6
UBA1-201ENST00000335972 ORAOV1Q8WV07 137 aa11.28□□□□□ -0.6
UBA1-201ENST00000335972 SPOCK3Q9BQ16 436 aa11.28□□□□□ -0.6
UBA1-201ENST00000335972 U3KQE9 123 aa11.28□□□□□ -0.6
UBA1-201ENST00000335972 RNASE8Q8TDE3 154 aaKnown RBP11.28□□□□□ -0.6
UBA1-201ENST00000335972 FOXC2Q99958 501 aa11.28□□□□□ -0.6
UBA1-201ENST00000335972 MS4A6AQ9H2W1 248 aa11.28□□□□□ -0.6
UBA1-201ENST00000335972 K7EMI3 77 aa11.28□□□□□ -0.6
UBA1-201ENST00000335972 GNRH2O43555 120 aa11.28□□□□□ -0.6
UBA1-201ENST00000335972 IGKV3-20P01619 116 aa11.28□□□□□ -0.6
UBA1-201ENST00000335972 TEX15Q9BXT5 2789 aa11.27□□□□□ -0.6
UBA1-201ENST00000335972 OR2K2Q8NGT1 345 aa11.27□□□□□ -0.6
UBA1-201ENST00000335972 S100A4P26447 101 aaKnown RBP11.27□□□□□ -0.61
UBA1-201ENST00000335972 C19orf54Q5BKX5 351 aa11.27□□□□□ -0.61
UBA1-201ENST00000335972 AMMECR1LQ6DCA0 310 aa11.27□□□□□ -0.61
UBA1-201ENST00000335972 IGKV2D-26A0A0A0MRZ7 120 aa11.27□□□□□ -0.61
UBA1-201ENST00000335972 FGF6P10767 208 aa11.27□□□□□ -0.61
UBA1-201ENST00000335972 HIST2H2BDQ6DRA6 164 aa11.27□□□□□ -0.61
UBA1-201ENST00000335972 C14orf178Q8N769 122 aaPredicted RBP11.27□□□□□ -0.61
UBA1-201ENST00000335972 A1L4Q6 167 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 RBAKDNA6NC62 111 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 K7EP13 123 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 UBE2V1Q13404 147 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 GTSCR1Q86UQ5 136 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 RAB37Q96AX2 223 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 RHPN1-AS1Q9BWJ2 59 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 FAM223BA6NKX1 122 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 MSMBP08118 114 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 C9orf47Q6ZRZ4 202 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 FAM223AQ8IWN6 122 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 NPFFR1Q9GZQ6 430 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 EPG5Q9HCE0 2579 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 MGPP08493 103 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 LGALS9BQ3B8N2 356 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 LGALS9CQ6DKI2 356 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 NEGR1Q7Z3B1 354 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 OR4C5Q8NGB2 326 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 CNFNQ9BYD5 112 aa11.26□□□□□ -0.61
UBA1-201ENST00000335972 IGHV4-59P01825 116 aa11.25□□□□□ -0.61
UBA1-201ENST00000335972 ANXA2RQ3ZCQ2 193 aa11.25□□□□□ -0.61
UBA1-201ENST00000335972 C12orf54Q6X4T0 127 aa11.25□□□□□ -0.61
UBA1-201ENST00000335972 OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
UBA1-201ENST00000335972 TMEM190Q8WZ59 177 aa11.25□□□□□ -0.61
UBA1-201ENST00000335972 DUX5Q96PT3 197 aa11.25□□□□□ -0.61
UBA1-201ENST00000335972 TMEM160Q9NX00 188 aa11.25□□□□□ -0.61
UBA1-201ENST00000335972 USP24Q9UPU5 2620 aa11.25□□□□□ -0.61
UBA1-201ENST00000335972 NOTCH3Q9UM47 2321 aa11.25□□□□□ -0.61
UBA1-201ENST00000335972 SMIM15Q7Z3B0 74 aa11.25□□□□□ -0.61
UBA1-201ENST00000335972 ARL6IP6Q8N6S5 226 aa11.25□□□□□ -0.61
UBA1-201ENST00000335972 RPL39LQ96EH5 51 aaKnown RBP11.25□□□□□ -0.61
UBA1-201ENST00000335972 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
UBA1-201ENST00000335972 TRAV8-6A0A0B4J262 113 aa11.24□□□□□ -0.61
UBA1-201ENST00000335972 A6NDX4 124 aa11.24□□□□□ -0.61
UBA1-201ENST00000335972 FCER1GP30273 86 aa11.24□□□□□ -0.61
UBA1-201ENST00000335972 TMEM97Q5BJF2 176 aa11.24□□□□□ -0.61
UBA1-201ENST00000335972 CCDC168Q8NDH2 2452 aa11.24□□□□□ -0.61
UBA1-201ENST00000335972 SMIM17P0DL12 118 aa11.24□□□□□ -0.61
UBA1-201ENST00000335972 DEFB125Q8N687 156 aa11.24□□□□□ -0.61
UBA1-201ENST00000335972 CD5LO43866 347 aa11.23□□□□□ -0.61
UBA1-201ENST00000335972 IGHG2P01859 326 aa11.23□□□□□ -0.61
UBA1-201ENST00000335972 C9orf139Q6ZV77 190 aa11.23□□□□□ -0.61
UBA1-201ENST00000335972 NRACQ8N912 160 aa11.23□□□□□ -0.61
UBA1-201ENST00000335972 MEGF9Q9H1U4 602 aa11.23□□□□□ -0.61
UBA1-201ENST00000335972 PPBPP02775 128 aa11.23□□□□□ -0.61
UBA1-201ENST00000335972 RNF151Q2KHN1 245 aa11.23□□□□□ -0.61
UBA1-201ENST00000335972 JPT2Q9H910 190 aa11.23□□□□□ -0.61
UBA1-201ENST00000335972 NDUFA4O00483 81 aa11.22□□□□□ -0.61
UBA1-201ENST00000335972 ODF1Q14990 250 aa11.22□□□□□ -0.61
UBA1-201ENST00000335972 KLK9Q2XQG4 91 aa11.22□□□□□ -0.61
UBA1-201ENST00000335972 KLK9Q9UKQ9 250 aa11.22□□□□□ -0.61
UBA1-201ENST00000335972 NXT2Q9NPJ8 142 aaKnown RBP11.22□□□□□ -0.61
UBA1-201ENST00000335972 PHLDA3Q9Y5J5 127 aa11.22□□□□□ -0.61
UBA1-201ENST00000335972 SRSF2Q01130 221 aaKnown RBP11.22□□□□□ -0.61
UBA1-201ENST00000335972 DEFB112Q30KQ8 113 aa11.22□□□□□ -0.61
UBA1-201ENST00000335972 TMEM8BA6NDV4 472 aa11.21□□□□□ -0.61
UBA1-201ENST00000335972 RBX1P62877 108 aa11.21□□□□□ -0.61
UBA1-201ENST00000335972 Q8N8P6 123 aa11.21□□□□□ -0.61
UBA1-201ENST00000335972 MRPL35Q9NZE8 188 aaKnown RBP11.21□□□□□ -0.61
UBA1-201ENST00000335972 MUC4Q99102 2169 aa11.21□□□□□ -0.61
UBA1-201ENST00000335972 IGLV2-18A0A075B6J9 118 aa11.21□□□□□ -0.62
UBA1-201ENST00000335972 SOCS3O14543 225 aa11.21□□□□□ -0.62
UBA1-201ENST00000335972 ZC2HC1BQ5TFG8 222 aa11.21□□□□□ -0.62
UBA1-201ENST00000335972 ZNF688P0C7X2 276 aa11.2□□□□□ -0.62
UBA1-201ENST00000335972 BOD1L2Q8IYS8 172 aa11.2□□□□□ -0.62
UBA1-201ENST00000335972 TRAV12-2A0A075B6T6 113 aa11.2□□□□□ -0.62
UBA1-201ENST00000335972 WNK1Q9H4A3 2382 aa11.2□□□□□ -0.62
UBA1-201ENST00000335972 NF1P21359 2839 aa11.2□□□□□ -0.62
UBA1-201ENST00000335972 TGFAP01135 160 aa11.19□□□□□ -0.62
UBA1-201ENST00000335972 LAGE3Q14657 143 aa11.19□□□□□ -0.62
UBA1-201ENST00000335972 MRPL53Q96EL3 112 aaKnown RBP11.19□□□□□ -0.62
UBA1-201ENST00000335972 TRAV12-3A0A0B4J271 114 aa11.19□□□□□ -0.62
UBA1-201ENST00000335972 HHLA3Q9XRX5 114 aa11.19□□□□□ -0.62
UBA1-201ENST00000335972 TRAV21A0A0B4J279 112 aa11.18□□□□□ -0.62
UBA1-201ENST00000335972 GCSHP23434 173 aa11.18□□□□□ -0.62
UBA1-201ENST00000335972 ASIPP42127 132 aa11.18□□□□□ -0.62
UBA1-201ENST00000335972 COTL1Q14019 142 aa11.18□□□□□ -0.62
UBA1-201ENST00000335972 LINC00477Q96M19 166 aa11.18□□□□□ -0.62
UBA1-201ENST00000335972 A0A087WWL8 130 aa11.18□□□□□ -0.62
UBA1-201ENST00000335972 H3BUT2 72 aa11.18□□□□□ -0.62
UBA1-201ENST00000335972 IGKCP01834 107 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms