RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 IFI27L1Q96BM0 104 aa14.37□□□□□ -0.11
RFTN1-201ENST00000334133 DKK2Q9UBU2 259 aa14.37□□□□□ -0.11
RFTN1-201ENST00000334133 C9orf139Q6ZV77 190 aa14.36□□□□□ -0.11
RFTN1-201ENST00000334133 RNASE4P34096 147 aaKnown RBP14.35□□□□□ -0.11
RFTN1-201ENST00000334133 SRSF2Q01130 221 aaKnown RBP14.35□□□□□ -0.11
RFTN1-201ENST00000334133 OR10J6PQ8NGY7 276 aa14.35□□□□□ -0.11
RFTN1-201ENST00000334133 SONP18583 2426 aaKnown RBP14.34□□□□□ -0.11
RFTN1-201ENST00000334133 TGFAP01135 160 aa14.34□□□□□ -0.11
RFTN1-201ENST00000334133 ZFAND2AQ8N6M9 145 aa14.34□□□□□ -0.11
RFTN1-201ENST00000334133 USMG5Q96IX5 58 aa14.34□□□□□ -0.11
RFTN1-201ENST00000334133 MRPL53Q96EL3 112 aaKnown RBP14.34□□□□□ -0.11
RFTN1-201ENST00000334133 SOCS3O14543 225 aa14.33□□□□□ -0.12
RFTN1-201ENST00000334133 DEFB104AQ8WTQ1 72 aa14.33□□□□□ -0.12
RFTN1-201ENST00000334133 BBC3Q96PG8 261 aaPredicted RBP14.33□□□□□ -0.12
RFTN1-201ENST00000334133 AGRNO00468 2067 aa14.33□□□□□ -0.12
RFTN1-201ENST00000334133 GNRH2O43555 120 aa14.32□□□□□ -0.12
RFTN1-201ENST00000334133 S100A4P26447 101 aaKnown RBP14.32□□□□□ -0.12
RFTN1-201ENST00000334133 TMEM158Q8WZ71 300 aa14.32□□□□□ -0.12
RFTN1-201ENST00000334133 OR2K2Q8NGT1 345 aa14.32□□□□□ -0.12
RFTN1-201ENST00000334133 IGLV1-40P01703 118 aa14.31□□□□□ -0.12
RFTN1-201ENST00000334133 ANXA2RQ3ZCQ2 193 aa14.31□□□□□ -0.12
RFTN1-201ENST00000334133 PPBPP02775 128 aa14.31□□□□□ -0.12
RFTN1-201ENST00000334133 BVES-AS1Q5T3Y7 98 aa14.31□□□□□ -0.12
RFTN1-201ENST00000334133 SMIM15Q7Z3B0 74 aa14.31□□□□□ -0.12
RFTN1-201ENST00000334133 MS4A6AQ9H2W1 248 aa14.31□□□□□ -0.12
RFTN1-201ENST00000334133 IGKV3-20P01619 116 aa14.31□□□□□ -0.12
RFTN1-201ENST00000334133 PRSS1P07477 247 aa14.31□□□□□ -0.12
RFTN1-201ENST00000334133 NMUP48645 174 aa14.31□□□□□ -0.12
RFTN1-201ENST00000334133 COX8AP10176 69 aa14.3□□□□□ -0.12
RFTN1-201ENST00000334133 DUX5Q96PT3 197 aa14.3□□□□□ -0.12
RFTN1-201ENST00000334133 DAZ1Q9NQZ3 744 aaKnown RBP14.3□□□□□ -0.12
RFTN1-201ENST00000334133 CBY3A6NI87 242 aa14.3□□□□□ -0.12
RFTN1-201ENST00000334133 C2orf91Q6ZV80 131 aa14.3□□□□□ -0.12
RFTN1-201ENST00000334133 C14orf178Q8N769 122 aaPredicted RBP14.3□□□□□ -0.12
RFTN1-201ENST00000334133 RNF223E7ERA6 249 aa14.29□□□□□ -0.12
RFTN1-201ENST00000334133 LGALS9BQ3B8N2 356 aa14.29□□□□□ -0.12
RFTN1-201ENST00000334133 LGALS9CQ6DKI2 356 aa14.29□□□□□ -0.12
RFTN1-201ENST00000334133 TTTY13Q9BZ97 58 aa14.29□□□□□ -0.12
RFTN1-201ENST00000334133 COX11Q9Y6N1 276 aa14.29□□□□□ -0.12
RFTN1-201ENST00000334133 A0A0G2JLM5 398 aa14.29□□□□□ -0.12
RFTN1-201ENST00000334133 KRTAP10-9P60411 292 aa14.29□□□□□ -0.12
RFTN1-201ENST00000334133 PCP2Q8IVA1 136 aa14.29□□□□□ -0.12
RFTN1-201ENST00000334133 LINC00477Q96M19 166 aa14.29□□□□□ -0.12
RFTN1-201ENST00000334133 PEF1Q9UBV8 284 aaKnown RBP14.29□□□□□ -0.12
RFTN1-201ENST00000334133 CCDC168Q8NDH2 2452 aa14.29□□□□□ -0.12
RFTN1-201ENST00000334133 NRACQ8N912 160 aa14.28□□□□□ -0.12
RFTN1-201ENST00000334133 ZNF469Q96JG9 3925 aaPredicted RBP14.28□□□□□ -0.12
RFTN1-201ENST00000334133 GAGE1Q13065 139 aa14.28□□□□□ -0.12
RFTN1-201ENST00000334133 ATP6V0BQ99437 205 aa14.28□□□□□ -0.12
RFTN1-201ENST00000334133 NXT2Q9NPJ8 142 aaKnown RBP14.28□□□□□ -0.12
RFTN1-201ENST00000334133 CCL25O15444 150 aa14.28□□□□□ -0.12
RFTN1-201ENST00000334133 FCER1GP30273 86 aa14.28□□□□□ -0.12
RFTN1-201ENST00000334133 HIST2H2BDQ6DRA6 164 aa14.28□□□□□ -0.12
RFTN1-201ENST00000334133 SMPXQ9UHP9 88 aa14.28□□□□□ -0.12
RFTN1-201ENST00000334133 OVOL1O14753 267 aa14.27□□□□□ -0.12
RFTN1-201ENST00000334133 CFHR3Q02985 330 aa14.27□□□□□ -0.12
RFTN1-201ENST00000334133 FOXC2Q99958 501 aa14.27□□□□□ -0.12
RFTN1-201ENST00000334133 SETD2Q9BYW2 2564 aaPredicted RBP14.27□□□□□ -0.13
RFTN1-201ENST00000334133 TRAV21A0A0B4J279 112 aa14.27□□□□□ -0.13
RFTN1-201ENST00000334133 H3BUA1 57 aa14.27□□□□□ -0.13
RFTN1-201ENST00000334133 MGPP08493 103 aa14.27□□□□□ -0.13
RFTN1-201ENST00000334133 PHLDA3Q9Y5J5 127 aa14.27□□□□□ -0.13
RFTN1-201ENST00000334133 UBR5O95071 2799 aaPredicted RBP14.27□□□□□ -0.13
RFTN1-201ENST00000334133 PTTG1IPP53801 180 aa14.26□□□□□ -0.13
RFTN1-201ENST00000334133 LINC01356Q8N9X3 169 aa14.26□□□□□ -0.13
RFTN1-201ENST00000334133 RPL39LQ96EH5 51 aaKnown RBP14.26□□□□□ -0.13
RFTN1-201ENST00000334133 MUC4Q99102 2169 aa14.26□□□□□ -0.13
RFTN1-201ENST00000334133 IGLV2-18A0A075B6J9 118 aa14.26□□□□□ -0.13
RFTN1-201ENST00000334133 C7orf71A4D174 169 aa14.26□□□□□ -0.13
RFTN1-201ENST00000334133 CD5LO43866 347 aa14.26□□□□□ -0.13
RFTN1-201ENST00000334133 ZNF688P0C7X2 276 aa14.26□□□□□ -0.13
RFTN1-201ENST00000334133 FGF6P10767 208 aa14.26□□□□□ -0.13
RFTN1-201ENST00000334133 Q8N8P6 123 aa14.26□□□□□ -0.13
RFTN1-201ENST00000334133 SMIM17P0DL12 118 aa14.25□□□□□ -0.13
RFTN1-201ENST00000334133 ASIPP42127 132 aa14.25□□□□□ -0.13
RFTN1-201ENST00000334133 BEX4Q9NWD9 120 aaPredicted RBP14.25□□□□□ -0.13
RFTN1-201ENST00000334133 PSMB8P28062 276 aa14.24□□□□□ -0.13
RFTN1-201ENST00000334133 SRSF1Q07955 248 aaKnown RBP eCLIP14.24□□□□□ -0.13
RFTN1-201ENST00000334133 VAMP3Q15836 100 aa14.24□□□□□ -0.13
RFTN1-201ENST00000334133 NF1P21359 2839 aa14.24□□□□□ -0.13
RFTN1-201ENST00000334133 IGKV2D-26A0A0A0MRZ7 120 aa14.24□□□□□ -0.13
RFTN1-201ENST00000334133 TAX1BP3O14907 124 aa14.24□□□□□ -0.13
RFTN1-201ENST00000334133 PPP1R14DQ9NXH3 145 aa14.24□□□□□ -0.13
RFTN1-201ENST00000334133 ODF1Q14990 250 aa14.23□□□□□ -0.13
RFTN1-201ENST00000334133 C12orf54Q6X4T0 127 aa14.23□□□□□ -0.13
RFTN1-201ENST00000334133 ORAOV1Q8WV07 137 aa14.23□□□□□ -0.13
RFTN1-201ENST00000334133 JPT2Q9H910 190 aa14.23□□□□□ -0.13
RFTN1-201ENST00000334133 TRAV12-3A0A0B4J271 114 aa14.23□□□□□ -0.13
RFTN1-201ENST00000334133 COX6B1P14854 86 aa14.23□□□□□ -0.13
RFTN1-201ENST00000334133 NEGR1Q7Z3B1 354 aa14.23□□□□□ -0.13
RFTN1-201ENST00000334133 NBPF19A0A087WUL8 3843 aa14.23□□□□□ -0.13
RFTN1-201ENST00000334133 TRAV12-2A0A075B6T6 113 aa14.22□□□□□ -0.13
RFTN1-201ENST00000334133 SYNJ2BPP57105 145 aa14.22□□□□□ -0.13
RFTN1-201ENST00000334133 PSMG4Q5JS54 123 aa14.22□□□□□ -0.13
RFTN1-201ENST00000334133 LENEPQ9Y5L5 61 aa14.22□□□□□ -0.13
RFTN1-201ENST00000334133 LAGE3Q14657 143 aa14.22□□□□□ -0.13
RFTN1-201ENST00000334133 GTSCR1Q86UQ5 136 aa14.22□□□□□ -0.13
RFTN1-201ENST00000334133 TMEM160Q9NX00 188 aa14.22□□□□□ -0.13
RFTN1-201ENST00000334133 APCP25054 2843 aa14.22□□□□□ -0.13
RFTN1-201ENST00000334133 A0A096LNT2 108 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms