RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SRSF8Q9BRL6 282 aaKnown RBP5.85□□□□□ -1.47
TRIM55-202ENST00000315962 HSPB8Q9UJY1 196 aa5.85□□□□□ -1.47
TRIM55-202ENST00000315962 IGHV4-31P0DP07 118 aa5.84□□□□□ -1.47
TRIM55-202ENST00000315962 HIST1H1AQ02539 215 aaPredicted RBP5.84□□□□□ -1.47
TRIM55-202ENST00000315962 SIGLEC15Q6ZMC9 328 aa5.84□□□□□ -1.47
TRIM55-202ENST00000315962 AP1S3Q96PC3 154 aa5.84□□□□□ -1.47
TRIM55-202ENST00000315962 PRAC2D3DTV9 90 aa5.84□□□□□ -1.48
TRIM55-202ENST00000315962 NPYP01303 97 aa5.84□□□□□ -1.48
TRIM55-202ENST00000315962 COX8AP10176 69 aa5.84□□□□□ -1.48
TRIM55-202ENST00000315962 KIR3DS1Q14943 382 aa5.84□□□□□ -1.48
TRIM55-202ENST00000315962 LINC01545Q5VT33 79 aa5.84□□□□□ -1.48
TRIM55-202ENST00000315962 PET117Q6UWS5 81 aa5.84□□□□□ -1.48
TRIM55-202ENST00000315962 Q6ZQT7 251 aa5.84□□□□□ -1.48
TRIM55-202ENST00000315962 ZNF48Q96MX3 618 aaPredicted RBP5.84□□□□□ -1.48
TRIM55-202ENST00000315962 PRELID3AQ96N28 172 aa5.84□□□□□ -1.48
TRIM55-202ENST00000315962 DUX3Q96PT4 197 aa5.84□□□□□ -1.48
TRIM55-202ENST00000315962 VGLL1Q99990 258 aa5.84□□□□□ -1.48
TRIM55-202ENST00000315962 AKAP9Q99996 3911 aa5.84□□□□□ -1.48
TRIM55-202ENST00000315962 CLPSL1A2RUU4 121 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 PLA2G2AP14555 144 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 SLC25A16P16260 332 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 ARL3P36405 182 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 OR10AG1Q8NH19 301 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 SMR3AQ99954 134 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 NDFIP1Q9BT67 221 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 OTORQ9NRC9 128 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 FN1P02751 2386 aaKnown RBP5.83□□□□□ -1.48
TRIM55-202ENST00000315962 HIVEP2P31629 2446 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 IGKV2D-26A0A0A0MRZ7 120 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 A6NDX4 124 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 HAX1O00165 279 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 GCSHP23434 173 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 ZNF80P51504 273 aaPredicted RBP5.83□□□□□ -1.48
TRIM55-202ENST00000315962 TWIST1Q15672 202 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 EEF1AKMT3Q96AZ1 226 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 ZNF492Q9P255 531 aa5.83□□□□□ -1.48
TRIM55-202ENST00000315962 SETXQ7Z333 2677 aaKnown RBP5.82□□□□□ -1.48
TRIM55-202ENST00000315962 J3QKU1 62 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 MRPS12O15235 138 aaKnown RBP5.82□□□□□ -1.48
TRIM55-202ENST00000315962 CD5LO43866 347 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 FGF6P10767 208 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 CSN1S1P47710 185 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 RIGQ13278 110 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 OR4X2Q8NGF9 303 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 AAMDCQ9H7C9 122 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 PEF1Q9UBV8 284 aaKnown RBP5.82□□□□□ -1.48
TRIM55-202ENST00000315962 NPIPB6E9PJ23 425 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 BUB3O43684 328 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 SH2D1AO60880 128 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 CT45A10P0DMU9 189 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 CKS2P33552 79 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 RPL24P83731 157 aaKnown RBP5.82□□□□□ -1.48
TRIM55-202ENST00000315962 DEFB136Q30KP8 78 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 MRPL51Q4U2R6 128 aaKnown RBP5.82□□□□□ -1.48
TRIM55-202ENST00000315962 S100A7AQ86SG5 101 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 GLMPQ8WWB7 406 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 ZFAND3Q9H8U3 227 aa5.82□□□□□ -1.48
TRIM55-202ENST00000315962 TMEM189A5PLL7 270 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 RAB9AP51151 201 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 DSCR9P59020 149 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 SRSF2Q01130 221 aaKnown RBP5.81□□□□□ -1.48
TRIM55-202ENST00000315962 FER1L6-AS1Q8NA97 138 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 TRAV26-2A0A0B4J265 109 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 A0A0G2JLM5 398 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 F6UB75 175 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 IGHG2P01859 326 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 IGHG4P01861 327 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 ORM1P02763 201 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 PSG3Q16557 428 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 KHDC1LQ5JSQ8 128 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 C18orf65Q6ZTR6 163 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 GTSCR1Q86UQ5 136 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 KRTAP1-3Q8IUG1 177 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 OR1N2Q8NGR9 330 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 IGF1P05019 195 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 RPL7P18124 248 aaKnown RBP5.81□□□□□ -1.48
TRIM55-202ENST00000315962 FXYD2P54710 66 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 CT83Q5H943 113 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 SFTA2Q6UW10 78 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 PSMG3-AS1Q96PY0 264 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 TMEM14CQ9P0S9 112 aa5.81□□□□□ -1.48
TRIM55-202ENST00000315962 TEP1Q99973 2627 aaKnown RBP5.8□□□□□ -1.48
TRIM55-202ENST00000315962 FAM162BQ5T6X4 162 aa5.8□□□□□ -1.48
TRIM55-202ENST00000315962 SMIM12Q96EX1 92 aa5.8□□□□□ -1.48
TRIM55-202ENST00000315962 METTL26Q96S19 204 aa5.8□□□□□ -1.48
TRIM55-202ENST00000315962 GFRA4Q9GZZ7 299 aa5.8□□□□□ -1.48
TRIM55-202ENST00000315962 SPCS1Q9Y6A9 102 aa5.8□□□□□ -1.48
TRIM55-202ENST00000315962 TRBV7-1A0A0A6YYK4 115 aa5.8□□□□□ -1.48
TRIM55-202ENST00000315962 K7ERU9 68 aa5.8□□□□□ -1.48
TRIM55-202ENST00000315962 ORMDL3Q8N138 153 aa5.8□□□□□ -1.48
TRIM55-202ENST00000315962 IFI27L1Q96BM0 104 aa5.8□□□□□ -1.48
TRIM55-202ENST00000315962 SMPXQ9UHP9 88 aa5.8□□□□□ -1.48
TRIM55-202ENST00000315962 PRSS1P07477 247 aa5.79□□□□□ -1.48
TRIM55-202ENST00000315962 FCER1GP30273 86 aa5.79□□□□□ -1.48
TRIM55-202ENST00000315962 FAM104BQ5XKR9 115 aa5.79□□□□□ -1.48
TRIM55-202ENST00000315962 OR2K2Q8NGT1 345 aa5.79□□□□□ -1.48
TRIM55-202ENST00000315962 MS4A6AQ9H2W1 248 aa5.79□□□□□ -1.48
TRIM55-202ENST00000315962 K7EQM0 130 aa5.79□□□□□ -1.48
TRIM55-202ENST00000315962 IGKV3-20P01619 116 aa5.79□□□□□ -1.48
TRIM55-202ENST00000315962 LEPP41159 167 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms