RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 SLC25A34Q6PIV7 304 aa12.43□□□□□ -0.42
SYVN1-202ENST00000307289 GOLT1BQ9Y3E0 138 aa12.43□□□□□ -0.42
SYVN1-202ENST00000307289 ZFAND2AQ8N6M9 145 aa12.43□□□□□ -0.42
SYVN1-202ENST00000307289 B4DSR2 109 aa12.43□□□□□ -0.42
SYVN1-202ENST00000307289 LEPP41159 167 aa12.43□□□□□ -0.42
SYVN1-202ENST00000307289 KRTAP10-9P60411 292 aa12.43□□□□□ -0.42
SYVN1-202ENST00000307289 SRSF2Q01130 221 aaKnown RBP12.43□□□□□ -0.42
SYVN1-202ENST00000307289 APCP25054 2843 aa12.42□□□□□ -0.42
SYVN1-202ENST00000307289 IGLV1-40P01703 118 aa12.42□□□□□ -0.42
SYVN1-202ENST00000307289 RNASE4P34096 147 aaKnown RBP12.42□□□□□ -0.42
SYVN1-202ENST00000307289 HIST2H2BDQ6DRA6 164 aa12.42□□□□□ -0.42
SYVN1-202ENST00000307289 DEFB104AQ8WTQ1 72 aa12.42□□□□□ -0.42
SYVN1-202ENST00000307289 AGRNO00468 2067 aa12.41□□□□□ -0.42
SYVN1-202ENST00000307289 M0R381 172 aa12.41□□□□□ -0.42
SYVN1-202ENST00000307289 GNRH2O43555 120 aa12.41□□□□□ -0.42
SYVN1-202ENST00000307289 SRSF1Q07955 248 aaKnown RBP eCLIP12.41□□□□□ -0.42
SYVN1-202ENST00000307289 ZNF124Q15973 351 aa12.41□□□□□ -0.42
SYVN1-202ENST00000307289 SPANXN1Q5VSR9 72 aa12.41□□□□□ -0.42
SYVN1-202ENST00000307289 IFI27L1Q96BM0 104 aa12.41□□□□□ -0.42
SYVN1-202ENST00000307289 MAP1LC3AQ9H492 121 aa12.41□□□□□ -0.42
SYVN1-202ENST00000307289 C9orf139Q6ZV77 190 aa12.41□□□□□ -0.42
SYVN1-202ENST00000307289 TGFAP01135 160 aa12.4□□□□□ -0.42
SYVN1-202ENST00000307289 CFHR3Q02985 330 aa12.4□□□□□ -0.42
SYVN1-202ENST00000307289 MRPL53Q96EL3 112 aaKnown RBP12.4□□□□□ -0.42
SYVN1-202ENST00000307289 USMG5Q96IX5 58 aa12.4□□□□□ -0.42
SYVN1-202ENST00000307289 C2orf91Q6ZV80 131 aa12.39□□□□□ -0.43
SYVN1-202ENST00000307289 CCDC168Q8NDH2 2452 aa12.39□□□□□ -0.43
SYVN1-202ENST00000307289 ANXA2RQ3ZCQ2 193 aa12.39□□□□□ -0.43
SYVN1-202ENST00000307289 TMEM158Q8WZ71 300 aa12.39□□□□□ -0.43
SYVN1-202ENST00000307289 DUX5Q96PT3 197 aa12.39□□□□□ -0.43
SYVN1-202ENST00000307289 TTTY13Q9BZ97 58 aa12.39□□□□□ -0.43
SYVN1-202ENST00000307289 SETD2Q9BYW2 2564 aaPredicted RBP12.39□□□□□ -0.43
SYVN1-202ENST00000307289 NRACQ8N912 160 aa12.38□□□□□ -0.43
SYVN1-202ENST00000307289 OR2K2Q8NGT1 345 aa12.38□□□□□ -0.43
SYVN1-202ENST00000307289 OR10J6PQ8NGY7 276 aa12.38□□□□□ -0.43
SYVN1-202ENST00000307289 RNF223E7ERA6 249 aa12.38□□□□□ -0.43
SYVN1-202ENST00000307289 BVES-AS1Q5T3Y7 98 aa12.38□□□□□ -0.43
SYVN1-202ENST00000307289 NIPBLQ6KC79 2804 aaeCLIP12.38□□□□□ -0.43
SYVN1-202ENST00000307289 IGLV2-18A0A075B6J9 118 aa12.38□□□□□ -0.43
SYVN1-202ENST00000307289 A0A096LNT2 108 aa12.38□□□□□ -0.43
SYVN1-202ENST00000307289 PCP2Q8IVA1 136 aa12.38□□□□□ -0.43
SYVN1-202ENST00000307289 FGF6P10767 208 aa12.37□□□□□ -0.43
SYVN1-202ENST00000307289 C14orf178Q8N769 122 aaPredicted RBP12.37□□□□□ -0.43
SYVN1-202ENST00000307289 MUC4Q99102 2169 aa12.37□□□□□ -0.43
SYVN1-202ENST00000307289 IGKV3-20P01619 116 aa12.37□□□□□ -0.43
SYVN1-202ENST00000307289 COX8AP10176 69 aa12.37□□□□□ -0.43
SYVN1-202ENST00000307289 DAZ1Q9NQZ3 744 aaKnown RBP12.37□□□□□ -0.43
SYVN1-202ENST00000307289 CCL25O15444 150 aa12.36□□□□□ -0.43
SYVN1-202ENST00000307289 PEF1Q9UBV8 284 aaKnown RBP12.36□□□□□ -0.43
SYVN1-202ENST00000307289 AKAP9Q99996 3911 aa12.36□□□□□ -0.43
SYVN1-202ENST00000307289 PPBPP02775 128 aa12.36□□□□□ -0.43
SYVN1-202ENST00000307289 MS4A6AQ9H2W1 248 aa12.36□□□□□ -0.43
SYVN1-202ENST00000307289 SMPXQ9UHP9 88 aa12.36□□□□□ -0.43
SYVN1-202ENST00000307289 COX11Q9Y6N1 276 aa12.36□□□□□ -0.43
SYVN1-202ENST00000307289 CD5LO43866 347 aa12.35□□□□□ -0.43
SYVN1-202ENST00000307289 PSMB8P28062 276 aa12.35□□□□□ -0.43
SYVN1-202ENST00000307289 LGALS9BQ3B8N2 356 aa12.35□□□□□ -0.43
SYVN1-202ENST00000307289 LGALS9CQ6DKI2 356 aa12.35□□□□□ -0.43
SYVN1-202ENST00000307289 RPL39LQ96EH5 51 aaKnown RBP12.35□□□□□ -0.43
SYVN1-202ENST00000307289 LINC00477Q96M19 166 aa12.35□□□□□ -0.43
SYVN1-202ENST00000307289 NMUP48645 174 aa12.35□□□□□ -0.43
SYVN1-202ENST00000307289 ATP6V0BQ99437 205 aa12.35□□□□□ -0.43
SYVN1-202ENST00000307289 S100A4P26447 101 aaKnown RBP12.34□□□□□ -0.43
SYVN1-202ENST00000307289 FCER1GP30273 86 aa12.34□□□□□ -0.43
SYVN1-202ENST00000307289 GAGE1Q13065 139 aa12.34□□□□□ -0.43
SYVN1-202ENST00000307289 JPT2Q9H910 190 aa12.34□□□□□ -0.43
SYVN1-202ENST00000307289 IGKV2D-26A0A0A0MRZ7 120 aa12.34□□□□□ -0.43
SYVN1-202ENST00000307289 CBY3A6NI87 242 aa12.34□□□□□ -0.43
SYVN1-202ENST00000307289 H3BUA1 57 aa12.34□□□□□ -0.43
SYVN1-202ENST00000307289 PRSS1P07477 247 aa12.34□□□□□ -0.43
SYVN1-202ENST00000307289 LINC01356Q8N9X3 169 aa12.34□□□□□ -0.43
SYVN1-202ENST00000307289 BEX4Q9NWD9 120 aaPredicted RBP12.34□□□□□ -0.43
SYVN1-202ENST00000307289 PPP1R14DQ9NXH3 145 aa12.34□□□□□ -0.43
SYVN1-202ENST00000307289 CHD6Q8TD26 2715 aa12.34□□□□□ -0.43
SYVN1-202ENST00000307289 TENM4Q6N022 2769 aa12.34□□□□□ -0.43
SYVN1-202ENST00000307289 A0A0G2JLM5 398 aa12.33□□□□□ -0.43
SYVN1-202ENST00000307289 OVOL1O14753 267 aa12.33□□□□□ -0.44
SYVN1-202ENST00000307289 TAX1BP3O14907 124 aa12.33□□□□□ -0.44
SYVN1-202ENST00000307289 ZNF688P0C7X2 276 aa12.33□□□□□ -0.44
SYVN1-202ENST00000307289 FAM19A4Q96LR4 140 aa12.33□□□□□ -0.44
SYVN1-202ENST00000307289 FOXC2Q99958 501 aa12.33□□□□□ -0.44
SYVN1-202ENST00000307289 PRRC2AP48634 2157 aaKnown RBP12.33□□□□□ -0.44
SYVN1-202ENST00000307289 SMIM17P0DL12 118 aa12.33□□□□□ -0.44
SYVN1-202ENST00000307289 RNASE3P12724 160 aaKnown RBP12.33□□□□□ -0.44
SYVN1-202ENST00000307289 ODF1Q14990 250 aa12.33□□□□□ -0.44
SYVN1-202ENST00000307289 NEGR1Q7Z3B1 354 aa12.33□□□□□ -0.44
SYVN1-202ENST00000307289 Q8N8P6 123 aa12.33□□□□□ -0.44
SYVN1-202ENST00000307289 DCANP1Q8TF63 244 aa12.33□□□□□ -0.44
SYVN1-202ENST00000307289 NXT2Q9NPJ8 142 aaKnown RBP12.33□□□□□ -0.44
SYVN1-202ENST00000307289 ITPR3Q14573 2671 aa12.32□□□□□ -0.44
SYVN1-202ENST00000307289 TRAV12-2A0A075B6T6 113 aa12.32□□□□□ -0.44
SYVN1-202ENST00000307289 TRAV21A0A0B4J279 112 aa12.32□□□□□ -0.44
SYVN1-202ENST00000307289 C18orf65Q6ZTR6 163 aa12.32□□□□□ -0.44
SYVN1-202ENST00000307289 LINC01546A6NGU7 62 aa12.32□□□□□ -0.44
SYVN1-202ENST00000307289 MGPP08493 103 aa12.32□□□□□ -0.44
SYVN1-202ENST00000307289 SMIM15Q7Z3B0 74 aa12.32□□□□□ -0.44
SYVN1-202ENST00000307289 PHLDA3Q9Y5J5 127 aa12.32□□□□□ -0.44
SYVN1-202ENST00000307289 IGHV4-4A0A075B6R2 117 aa12.31□□□□□ -0.44
SYVN1-202ENST00000307289 C7orf71A4D174 169 aa12.31□□□□□ -0.44
SYVN1-202ENST00000307289 SYNJ2BPP57105 145 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms