RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SLC25A16P16260 332 aa14.05□□□□□ -0.16
PDLIM3-201ENST00000284767 S100A7P31151 101 aa14.05□□□□□ -0.16
PDLIM3-201ENST00000284767 LEPP41159 167 aa14.05□□□□□ -0.16
PDLIM3-201ENST00000284767 BLCAPP62952 87 aa14.05□□□□□ -0.16
PDLIM3-201ENST00000284767 CLEC19AQ6UXS0 136 aa14.05□□□□□ -0.16
PDLIM3-201ENST00000284767 ZNF502Q8TBZ5 544 aa14.05□□□□□ -0.16
PDLIM3-201ENST00000284767 CCDC140Q96MF4 163 aa14.05□□□□□ -0.16
PDLIM3-201ENST00000284767 C18orf15Q96N68 181 aa14.05□□□□□ -0.16
PDLIM3-201ENST00000284767 MXRA5Q9NR99 2828 aa14.05□□□□□ -0.16
PDLIM3-201ENST00000284767 SMIM17P0DL12 118 aa14.04□□□□□ -0.16
PDLIM3-201ENST00000284767 WFDC3Q8IUB2 231 aa14.04□□□□□ -0.16
PDLIM3-201ENST00000284767 PSMG3-AS1Q96PY0 264 aa14.04□□□□□ -0.16
PDLIM3-201ENST00000284767 HHLA3Q9XRX5 114 aa14.04□□□□□ -0.16
PDLIM3-201ENST00000284767 FABP5P3A8MUU1 101 aa14.04□□□□□ -0.16
PDLIM3-201ENST00000284767 TGFAP01135 160 aa14.04□□□□□ -0.16
PDLIM3-201ENST00000284767 SAMD5Q5TGI4 173 aa14.04□□□□□ -0.16
PDLIM3-201ENST00000284767 SMPXQ9UHP9 88 aa14.04□□□□□ -0.16
PDLIM3-201ENST00000284767 TNFRSF6BO95407 300 aa14.03□□□□□ -0.16
PDLIM3-201ENST00000284767 IGHG4P01861 327 aa14.03□□□□□ -0.16
PDLIM3-201ENST00000284767 ORM1P02763 201 aa14.03□□□□□ -0.16
PDLIM3-201ENST00000284767 RIPPLY3P57055 190 aa14.03□□□□□ -0.16
PDLIM3-201ENST00000284767 SMAD5-AS1Q9Y6J3 95 aa14.03□□□□□ -0.16
PDLIM3-201ENST00000284767 CREBBPQ92793 2442 aa14.03□□□□□ -0.16
PDLIM3-201ENST00000284767 EVI2AP22794 236 aa14.03□□□□□ -0.16
PDLIM3-201ENST00000284767 MSRB1Q9NZV6 116 aa14.03□□□□□ -0.16
PDLIM3-201ENST00000284767 TRAV41A0A0B4J266 112 aa14.02□□□□□ -0.16
PDLIM3-201ENST00000284767 IGKCP01834 107 aa14.02□□□□□ -0.16
PDLIM3-201ENST00000284767 HLA-DRB4P13762 266 aa14.02□□□□□ -0.16
PDLIM3-201ENST00000284767 LINC01356Q8N9X3 169 aa14.02□□□□□ -0.16
PDLIM3-201ENST00000284767 HLA-DRB4X5D2U9 266 aa14.02□□□□□ -0.16
PDLIM3-201ENST00000284767 ATP5LO75964 103 aa14.02□□□□□ -0.17
PDLIM3-201ENST00000284767 TLN2Q9Y4G6 2542 aa14.02□□□□□ -0.17
PDLIM3-201ENST00000284767 IGHV3OR16-13A0A075B7E8 117 aa14.01□□□□□ -0.17
PDLIM3-201ENST00000284767 IGKV2D-26A0A0A0MRZ7 120 aa14.01□□□□□ -0.17
PDLIM3-201ENST00000284767 IGHV3-74A0A0B4J1X5 117 aa14.01□□□□□ -0.17
PDLIM3-201ENST00000284767 A6NDX4 124 aa14.01□□□□□ -0.17
PDLIM3-201ENST00000284767 PRSS1P07477 247 aa14.01□□□□□ -0.17
PDLIM3-201ENST00000284767 GCSHP23434 173 aa14.01□□□□□ -0.17
PDLIM3-201ENST00000284767 CHAC1Q9BUX1 264 aa14.01□□□□□ -0.17
PDLIM3-201ENST00000284767 KMT2BQ9UMN6 2715 aaPredicted RBP14.01□□□□□ -0.17
PDLIM3-201ENST00000284767 CCDC168Q8NDH2 2452 aa14□□□□□ -0.17
PDLIM3-201ENST00000284767 IGHV3-66A0A0C4DH42 116 aa14□□□□□ -0.17
PDLIM3-201ENST00000284767 LCNL1Q6ZST4 164 aa14□□□□□ -0.17
PDLIM3-201ENST00000284767 CR1P17927 2039 aa14□□□□□ -0.17
PDLIM3-201ENST00000284767 FXYD2P54710 66 aa14□□□□□ -0.17
PDLIM3-201ENST00000284767 C19orf54Q5BKX5 351 aa14□□□□□ -0.17
PDLIM3-201ENST00000284767 IGFL4Q6B9Z1 124 aa14□□□□□ -0.17
PDLIM3-201ENST00000284767 Q8N8P6 123 aa14□□□□□ -0.17
PDLIM3-201ENST00000284767 SELENOKQ9Y6D0 94 aa14□□□□□ -0.17
PDLIM3-201ENST00000284767 HELZ2Q9BYK8 2649 aaKnown RBP13.99□□□□□ -0.17
PDLIM3-201ENST00000284767 TMEM238C9JI98 176 aa13.99□□□□□ -0.17
PDLIM3-201ENST00000284767 DPM2O94777 84 aa13.99□□□□□ -0.17
PDLIM3-201ENST00000284767 HLA-DMBP28068 263 aa13.99□□□□□ -0.17
PDLIM3-201ENST00000284767 DEFB112Q30KQ8 113 aa13.99□□□□□ -0.17
PDLIM3-201ENST00000284767 TM4SF20Q53R12 229 aa13.99□□□□□ -0.17
PDLIM3-201ENST00000284767 IGHV3-49A0A0A0MS15 119 aa13.99□□□□□ -0.17
PDLIM3-201ENST00000284767 RBAKDNA6NC62 111 aa13.99□□□□□ -0.17
PDLIM3-201ENST00000284767 ZNF207O43670 478 aaKnown RBP13.99□□□□□ -0.17
PDLIM3-201ENST00000284767 GAS8-AS1O95177 125 aa13.99□□□□□ -0.17
PDLIM3-201ENST00000284767 Q5PR19 223 aa13.99□□□□□ -0.17
PDLIM3-201ENST00000284767 PRRC2AP48634 2157 aaKnown RBP13.98□□□□□ -0.17
PDLIM3-201ENST00000284767 IGHV4-59P01825 116 aa13.98□□□□□ -0.17
PDLIM3-201ENST00000284767 DEFB113Q30KQ7 82 aa13.98□□□□□ -0.17
PDLIM3-201ENST00000284767 TMEM95Q3KNT9 176 aa13.98□□□□□ -0.17
PDLIM3-201ENST00000284767 TMEM158Q8WZ71 300 aa13.98□□□□□ -0.17
PDLIM3-201ENST00000284767 FOXC2Q99958 501 aa13.98□□□□□ -0.17
PDLIM3-201ENST00000284767 TM2D2Q9BX73 214 aa13.98□□□□□ -0.17
PDLIM3-201ENST00000284767 ZFAND3Q9H8U3 227 aa13.98□□□□□ -0.17
PDLIM3-201ENST00000284767 TRBV25-1A0A075B6N4 114 aa13.98□□□□□ -0.17
PDLIM3-201ENST00000284767 TRGV3P03979 118 aa13.97□□□□□ -0.17
PDLIM3-201ENST00000284767 RAB9AP51151 201 aa13.97□□□□□ -0.17
PDLIM3-201ENST00000284767 KLK9Q2XQG4 91 aa13.97□□□□□ -0.17
PDLIM3-201ENST00000284767 KLK9Q9UKQ9 250 aa13.97□□□□□ -0.17
PDLIM3-201ENST00000284767 IGLV2-18A0A075B6J9 118 aa13.97□□□□□ -0.17
PDLIM3-201ENST00000284767 TRBV12-3P01733 135 aa13.97□□□□□ -0.17
PDLIM3-201ENST00000284767 PHLDA1Q8WV24 401 aaPredicted RBP13.97□□□□□ -0.17
PDLIM3-201ENST00000284767 EEF1AKMT3Q96AZ1 226 aa13.97□□□□□ -0.17
PDLIM3-201ENST00000284767 KLK15Q9H2R5 256 aa13.97□□□□□ -0.17
PDLIM3-201ENST00000284767 GATA3P23771 443 aa13.96□□□□□ -0.17
PDLIM3-201ENST00000284767 CEND1Q8N111 149 aa13.96□□□□□ -0.17
PDLIM3-201ENST00000284767 CLPSL1A2RUU4 121 aa13.96□□□□□ -0.17
PDLIM3-201ENST00000284767 PRSS47A8MTI9 375 aa13.96□□□□□ -0.17
PDLIM3-201ENST00000284767 IGHG2P01859 326 aa13.96□□□□□ -0.17
PDLIM3-201ENST00000284767 IGHV4-31P0DP07 118 aa13.96□□□□□ -0.17
PDLIM3-201ENST00000284767 ATP5G2Q06055 141 aa13.96□□□□□ -0.17
PDLIM3-201ENST00000284767 ERCC8Q13216 396 aa13.96□□□□□ -0.17
PDLIM3-201ENST00000284767 ZC2HC1BQ5TFG8 222 aa13.96□□□□□ -0.17
PDLIM3-201ENST00000284767 ITPR3Q14573 2671 aa13.95□□□□□ -0.18
PDLIM3-201ENST00000284767 IGHV3-11P01762 117 aa13.95□□□□□ -0.18
PDLIM3-201ENST00000284767 GTSCR1Q86UQ5 136 aa13.95□□□□□ -0.18
PDLIM3-201ENST00000284767 TTTY13Q9BZ97 58 aa13.95□□□□□ -0.18
PDLIM3-201ENST00000284767 Q96MF0 132 aa13.95□□□□□ -0.18
PDLIM3-201ENST00000284767 IGF1P05019 195 aa13.94□□□□□ -0.18
PDLIM3-201ENST00000284767 GATA1P15976 413 aaPredicted RBP13.94□□□□□ -0.18
PDLIM3-201ENST00000284767 PPIFP30405 207 aaKnown RBP13.94□□□□□ -0.18
PDLIM3-201ENST00000284767 TAL2Q16559 108 aa13.94□□□□□ -0.18
PDLIM3-201ENST00000284767 SLC50A1Q9BRV3 221 aa13.94□□□□□ -0.18
PDLIM3-201ENST00000284767 IL17RELQ6ZVW7 336 aa13.94□□□□□ -0.18
PDLIM3-201ENST00000284767 TRBV7-1A0A0A6YYK4 115 aa13.93□□□□□ -0.18
PDLIM3-201ENST00000284767 PRAC2D3DTV9 90 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms