RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 C9orf153Q5TBE3 101 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 OPRPNQ99935 248 aaPredicted RBP3.24□□□□□ -1.89
SCN3A-201ENST00000283254 LY6HO94772 140 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 TFF1P04155 84 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 C3orf79P0CE67 100 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 VSIRQ9H7M9 311 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 WFDC1Q9HC57 220 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 FAM215AQ9Y5M1 114 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 WISP1O95388 367 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 ACYP1P07311 99 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 NTF4P34130 210 aa3.24□□□□□ -1.89
SCN3A-201ENST00000283254 PRR30Q53SZ7 412 aaPredicted RBP3.24□□□□□ -1.89
SCN3A-201ENST00000283254 WDR87Q6ZQQ6 2873 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 CCL24O00175 119 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 POU2AF1Q16633 256 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 SMIM20Q8N5G0 67 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 IGFBPL1Q8WX77 278 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 MESP1Q9BRJ9 268 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 CLPSL1A2RUU4 121 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 UBE2AP49459 152 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 CARD19Q96LW7 228 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 PRO1854Q9UHT4 67 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 IGLV1-44P01699 117 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 MYCNOSP40205 109 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 DAZ2Q13117 558 aaKnown RBP3.23□□□□□ -1.89
SCN3A-201ENST00000283254 DAZ4Q86SG3 579 aaKnown RBP3.23□□□□□ -1.89
SCN3A-201ENST00000283254 C20orf144Q9BQM9 153 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 DAZ3Q9NR90 486 aaKnown RBP3.23□□□□□ -1.89
SCN3A-201ENST00000283254 DLEU1O43261 78 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 CFHR3Q02985 330 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 LHFPL4Q7Z7J7 247 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 PIP4P1Q86T03 277 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 K7EM74 188 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 K7EQD1 137 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 IGKV1-39P01597 117 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 IGKV1D-39P04432 117 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 PRSS57Q6UWY2 283 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 ATP6V0E2Q8NHE4 81 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 SIGLEC8Q9NYZ4 499 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 KIR2DL5BA0A0G2JN68 375 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 KIR2DL5BA0A0G2JPC4 375 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 COX7A2LO14548 114 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 SPINK8P0C7L1 97 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 RPL18AQ02543 176 aaKnown RBP3.23□□□□□ -1.89
SCN3A-201ENST00000283254 KIR2DL5AQ8N109 375 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 A8MWP6 167 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 F8W1H4 67 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 XCL1P47992 114 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 C18orf32Q8TCD1 76 aa3.23□□□□□ -1.89
SCN3A-201ENST00000283254 GYPEP15421 78 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 QRFPP83859 136 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 WT1-ASQ06250 92 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 IGHV3-16A0A0C4DH30 117 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 LYL1P12980 280 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 PRSS33Q8NF86 280 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 C11orf52Q96A22 123 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 NOP10Q9NPE3 64 aaKnown RBP3.22□□□□□ -1.89
SCN3A-201ENST00000283254 A0A1B0GX51 115 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 IGLC1P0CG04 106 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 F6UB75 175 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 LTAP01374 205 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 DSCAMO60469 2012 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 SHISA9B4DS77 424 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 DAZAP2Q15038 168 aaPredicted RBP3.22□□□□□ -1.89
SCN3A-201ENST00000283254 B9D2Q9BPU9 175 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 ANK1P16157 1881 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 C5orf24Q7Z6I8 188 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 Q9HAA7 133 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 ADAMTSL5Q6ZMM2 481 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 MAPK1IP1LQ8NDC0 245 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 MED12LQ86YW9 2145 aa3.22□□□□□ -1.89
SCN3A-201ENST00000283254 HOXB4P17483 251 aaPredicted RBP3.21□□□□□ -1.89
SCN3A-201ENST00000283254 IGFL4Q6B9Z1 124 aa3.21□□□□□ -1.89
SCN3A-201ENST00000283254 Q71RC1 249 aaPredicted RBP3.21□□□□□ -1.89
SCN3A-201ENST00000283254 GFI1Q99684 422 aa3.21□□□□□ -1.89
SCN3A-201ENST00000283254 ANKRD17O75179 2603 aaKnown RBP3.21□□□□□ -1.89
SCN3A-201ENST00000283254 NCKAP5O14513 1909 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 hDV102S1A0JD36 115 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 LGALS9BQ3B8N2 356 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 LGALS9CQ6DKI2 356 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 FANCD2OSQ96PS1 177 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 Q9H8V8 135 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 TMEM213A2RRL7 107 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 F8W735 103 aaPredicted RBP3.21□□□□□ -1.9
SCN3A-201ENST00000283254 SMKR1H3BMG3 65 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 LINC01620Q4KN68 170 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 VSIG2Q96IQ7 327 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 NYNRINQ9P2P1 1898 aaKnown RBP3.21□□□□□ -1.9
SCN3A-201ENST00000283254 MUC4Q99102 2169 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 A0A087X0K7 114 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 TRAV4A0A0B4J268 109 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 COLCA2A8K830 154 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 SIVA1O15304 175 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 BUB3O43684 328 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.21□□□□□ -1.9
SCN3A-201ENST00000283254 SEC61GP60059 68 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 UBE2V1Q13404 147 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 FAM120AOSQ5T036 256 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 TRAV12-2A0A075B6T6 113 aa3.21□□□□□ -1.9
SCN3A-201ENST00000283254 FGF6P10767 208 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 571 ms