RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 TMEM183BQ1AE95 376 aa5.99□□□□□ -1.45
TPM3-201ENST00000271850 TMEM183AQ8IXX5 376 aa5.99□□□□□ -1.45
TPM3-201ENST00000271850 AAMDCQ9H7C9 122 aa5.99□□□□□ -1.45
TPM3-201ENST00000271850 TRGV4A0A0C4DH28 118 aa5.98□□□□□ -1.45
TPM3-201ENST00000271850 IGHV3-16A0A0C4DH30 117 aa5.98□□□□□ -1.45
TPM3-201ENST00000271850 RBAKDNA6NC62 111 aa5.98□□□□□ -1.45
TPM3-201ENST00000271850 SRIP30626 198 aa5.98□□□□□ -1.45
TPM3-201ENST00000271850 RANP62826 216 aaKnown RBP5.98□□□□□ -1.45
TPM3-201ENST00000271850 IFITM3Q01628 133 aa5.98□□□□□ -1.45
TPM3-201ENST00000271850 SLAQ13239 276 aa5.98□□□□□ -1.45
TPM3-201ENST00000271850 WFDC2Q14508 124 aa5.98□□□□□ -1.45
TPM3-201ENST00000271850 TDRG1Q3Y452 100 aa5.98□□□□□ -1.45
TPM3-201ENST00000271850 DPPA3Q6W0C5 159 aa5.98□□□□□ -1.45
TPM3-201ENST00000271850 NFE4Q86UQ8 179 aa5.98□□□□□ -1.45
TPM3-201ENST00000271850 HMCN2Q8NDA2 5059 aa5.97□□□□□ -1.45
TPM3-201ENST00000271850 TRAV8-1A0A0A6YYK1 113 aa5.97□□□□□ -1.45
TPM3-201ENST00000271850 TRAV4A0A0B4J268 109 aa5.97□□□□□ -1.45
TPM3-201ENST00000271850 F6UZH7 168 aa5.97□□□□□ -1.45
TPM3-201ENST00000271850 TYMSP04818 313 aa5.97□□□□□ -1.45
TPM3-201ENST00000271850 CRYGDP07320 174 aa5.97□□□□□ -1.45
TPM3-201ENST00000271850 GATA1P15976 413 aaPredicted RBP5.97□□□□□ -1.45
TPM3-201ENST00000271850 GCSHP23434 173 aa5.97□□□□□ -1.45
TPM3-201ENST00000271850 H2BFSP57053 126 aa5.97□□□□□ -1.45
TPM3-201ENST00000271850 LRRC37A5PQ49AS3 106 aa5.97□□□□□ -1.45
TPM3-201ENST00000271850 WFDC1Q9HC57 220 aa5.97□□□□□ -1.45
TPM3-201ENST00000271850 C11orf21Q9P2W6 132 aa5.97□□□□□ -1.45
TPM3-201ENST00000271850 OR7C2O60412 319 aa5.96□□□□□ -1.46
TPM3-201ENST00000271850 UBE2L3P68036 154 aaKnown RBP5.96□□□□□ -1.46
TPM3-201ENST00000271850 SRSF3P84103 164 aaKnown RBP5.96□□□□□ -1.46
TPM3-201ENST00000271850 ASAH1Q13510 395 aa5.96□□□□□ -1.46
TPM3-201ENST00000271850 FRZBQ92765 325 aa5.96□□□□□ -1.46
TPM3-201ENST00000271850 SPXQ9BT56 116 aa5.96□□□□□ -1.46
TPM3-201ENST00000271850 CCDC32Q9BV29 185 aa5.96□□□□□ -1.46
TPM3-201ENST00000271850 NMES1Q9C002 83 aa5.96□□□□□ -1.46
TPM3-201ENST00000271850 TRGV11A0A075B6L2 103 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 FAM240BA0A1B0GVZ2 78 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 M0R2P5 195 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 ORM1P02763 201 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 EVI2AP22794 236 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 ZNF80P51504 273 aaPredicted RBP5.95□□□□□ -1.46
TPM3-201ENST00000271850 TIRAPP58753 221 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 GNG5P63218 68 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 LINC01556Q5JQF7 62 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 FFAR4Q5NUL3 377 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 Q8N814 137 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 TMED6Q8WW62 240 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 ATP5SQ99766 215 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 SLC25A31Q9H0C2 315 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 NAGKQ9UJ70 344 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 TMA7Q9Y2S6 64 aaKnown RBP5.95□□□□□ -1.46
TPM3-201ENST00000271850 LENEPQ9Y5L5 61 aa5.95□□□□□ -1.46
TPM3-201ENST00000271850 TRAV9-2A0A087WT02 112 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 IGLV5-52A0A0A0MRZ9 124 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 IGHV3-38A0A0C4DH36 116 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 IBA57-AS1B1ANH7 110 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 C9JCJ5 164 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 K7EP13 123 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 IFNA5P01569 189 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 FAM159AQ6UWV7 190 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 Q6ZSA8 131 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 GOLT1AQ6ZVE7 132 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 SLC25A29Q8N8R3 303 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 TMEM75Q8N9X5 138 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 OR4C5Q8NGB2 326 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 PPP1R1CQ8WVI7 109 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 SGK494Q96LW2 274 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 HYLS1Q96M11 299 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 TMEM70Q9BUB7 260 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 OTORQ9NRC9 128 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 PTTG2Q9NZH5 202 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 Q9UF83 564 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 RPH3ALQ9UNE2 315 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 HSPB11Q9Y547 144 aa5.94□□□□□ -1.46
TPM3-201ENST00000271850 PKHD1L1Q86WI1 4243 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 PGPA6NDG6 321 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 RS1O15537 224 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 IGLV2-11P01706 119 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 LINC00694P0DN24 101 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 CSN1S1P47710 185 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 KRTAP10-4P60372 401 aaPredicted RBP5.93□□□□□ -1.46
TPM3-201ENST00000271850 RAB2AP61019 212 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 KHDC3LQ587J8 217 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 CFAP126Q5VTH2 177 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 Q6ZSN1 163 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 C10orf126Q8N4M7 172 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 PCNPQ8WW12 178 aaKnown RBP5.93□□□□□ -1.46
TPM3-201ENST00000271850 C9orf85Q96MD7 179 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 TXNDC17Q9BRA2 123 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 SMIM3Q9BZL3 60 aa5.93□□□□□ -1.46
TPM3-201ENST00000271850 IGHV3-73A0A0B4J1V6 119 aa5.92□□□□□ -1.46
TPM3-201ENST00000271850 TRAV21A0A0B4J279 112 aa5.92□□□□□ -1.46
TPM3-201ENST00000271850 HMGB3O15347 200 aaKnown RBP5.92□□□□□ -1.46
TPM3-201ENST00000271850 MPC2O95563 127 aa5.92□□□□□ -1.46
TPM3-201ENST00000271850 IGHV3-30P01768 117 aa5.92□□□□□ -1.46
TPM3-201ENST00000271850 IGHV3-33P01772 117 aa5.92□□□□□ -1.46
TPM3-201ENST00000271850 IGHV3-30-3P0DP02 117 aa5.92□□□□□ -1.46
TPM3-201ENST00000271850 IGHV3-30-5P0DP03 117 aa5.92□□□□□ -1.46
TPM3-201ENST00000271850 RNASE3P12724 160 aaKnown RBP5.92□□□□□ -1.46
TPM3-201ENST00000271850 SYT8Q8NBV8 401 aa5.92□□□□□ -1.46
TPM3-201ENST00000271850 NTN5Q8WTR8 489 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 242.6 ms