RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 HIST1H2BNQ99877 126 aa6.61□□□□□ -1.35
COL6A5-201ENST00000265379 HIST1H2BMQ99879 126 aa6.61□□□□□ -1.35
COL6A5-201ENST00000265379 RNF114Q9Y508 228 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 C11orf53Q8IXP5 236 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 CCL3L1P16619 93 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 C1orf159Q96HA4 380 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 K7EP34 96 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 P0C879 139 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 C15orf32Q32M92 178 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 IL17RELQ6ZVW7 336 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 HIST1H2BLQ99880 126 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 SRRM4A7MD48 611 aaKnown RBP6.6□□□□□ -1.35
COL6A5-201ENST00000265379 MSMBP08118 114 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 CXCL1P09341 107 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 K7EM74 188 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 LY6G5BQ8NDX9 201 aa6.6□□□□□ -1.35
COL6A5-201ENST00000265379 TRAV40A0A0B4J280 105 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 SELENOKQ9Y6D0 94 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 IGHV3-73A0A0B4J1V6 119 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 FAM201AQ5SY85 155 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 NAV2Q8IVL1 2488 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 RPL35AP18077 110 aaKnown RBP6.59□□□□□ -1.35
COL6A5-201ENST00000265379 OCC1Q8TAD7 63 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 ABCA12Q86UK0 2595 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 IGF2RP11717 2491 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 IGHV1-69DA0A0B4J2H0 117 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 IGHV1-69P01742 117 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 Q86TA4 180 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 LRRC75A-AS1Q8N1F1 130 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 PTH2Q96A98 100 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 CRIM1Q9NZV1 1036 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 STPG4Q8N801 248 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 RMI2Q96E14 147 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 A0A0U1RQV1 116 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 NDUFB1O75438 58 aa6.59□□□□□ -1.35
COL6A5-201ENST00000265379 PRR20EP86478 221 aa6.59□□□□□ -1.36
COL6A5-201ENST00000265379 PRR20CP86479 221 aa6.59□□□□□ -1.36
COL6A5-201ENST00000265379 PRR20DP86480 221 aa6.59□□□□□ -1.36
COL6A5-201ENST00000265379 PRR20BP86481 221 aa6.59□□□□□ -1.36
COL6A5-201ENST00000265379 PRR20AP86496 221 aa6.59□□□□□ -1.36
COL6A5-201ENST00000265379 HLA-DRB4P13762 266 aa6.58□□□□□ -1.36
COL6A5-201ENST00000265379 HLA-DRB4X5D2U9 266 aa6.58□□□□□ -1.36
COL6A5-201ENST00000265379 IGKV2-40A0A087WW87 121 aaPredicted RBP6.58□□□□□ -1.36
COL6A5-201ENST00000265379 IGKV2D-40P01614 121 aaPredicted RBP6.58□□□□□ -1.36
COL6A5-201ENST00000265379 KLF5Q13887 457 aaPredicted RBP6.58□□□□□ -1.36
COL6A5-201ENST00000265379 COA6Q5JTJ3 125 aaKnown RBP6.58□□□□□ -1.36
COL6A5-201ENST00000265379 ZNF580Q9UK33 172 aa6.58□□□□□ -1.36
COL6A5-201ENST00000265379 IGHV2-5P01817 119 aa6.58□□□□□ -1.36
COL6A5-201ENST00000265379 CRYBA4P53673 196 aa6.58□□□□□ -1.36
COL6A5-201ENST00000265379 A6NED7 52 aa6.58□□□□□ -1.36
COL6A5-201ENST00000265379 PMS2P5A8MQ11 134 aa6.58□□□□□ -1.36
COL6A5-201ENST00000265379 WFDC12Q8WWY7 111 aa6.58□□□□□ -1.36
COL6A5-201ENST00000265379 PCSK5Q92824 1860 aa6.58□□□□□ -1.36
COL6A5-201ENST00000265379 IGHV1-24A0A0C4DH33 117 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 H3BMG7 143 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 BVES-AS1Q5T3Y7 98 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 DMRTC2Q8IXT2 367 aaPredicted RBP6.57□□□□□ -1.36
COL6A5-201ENST00000265379 MCRIP2Q9BUT9 160 aaKnown RBP6.57□□□□□ -1.36
COL6A5-201ENST00000265379 FAM236AA0A1B0GUQ0 79 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 FAM236BA0A1B0GV22 79 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 H3BRN7 92 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 CRLF1O75462 422 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 PSMB8P28062 276 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 ZNF524Q96C55 264 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 ORMDL1Q9P0S3 153 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 TEX22C9J3V5 150 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 PAX9P55771 341 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 MST1LQ2TV78 715 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 A0A1W2PPM0 123 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 FAM104BQ5XKR9 115 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 ZNF329Q86UD4 541 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 TRPT1Q86TN4 253 aaKnown RBP6.57□□□□□ -1.36
COL6A5-201ENST00000265379 VSIG2Q96IQ7 327 aa6.57□□□□□ -1.36
COL6A5-201ENST00000265379 TRBV19A0A075B6N1 114 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 CGB3P0DN86 165 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 AJUBAQ96IF1 538 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 TRAV3A0A0B4J244 114 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 IGHV3-53P01767 116 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 NTF4P34130 210 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 KIR2DL5BA0A0G2JN68 375 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 KIR2DL5BA0A0G2JPC4 375 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 CD24P25063 80 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 LYZL1Q6UWQ5 148 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 KIR2DL5AQ8N109 375 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 C3orf56Q8N813 242 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 A0A087X0K7 114 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 CGB7P0DN87 165 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 KLHL30-AS1Q8NEE0 82 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 YPEL4Q96NS1 127 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 MED14OSP0DP75 135 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 HOXB4P17483 251 aaPredicted RBP6.56□□□□□ -1.36
COL6A5-201ENST00000265379 C5orf63A6NC05 138 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 PRSS46E5RG02 174 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 Q6ZRM9 215 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 LIME1Q9H400 295 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 BUB3O43684 328 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 VSIRQ9H7M9 311 aa6.56□□□□□ -1.36
COL6A5-201ENST00000265379 TRBV25-1A0A075B6N4 114 aa6.55□□□□□ -1.36
COL6A5-201ENST00000265379 TEX48A0A1B0GUV7 120 aa6.55□□□□□ -1.36
COL6A5-201ENST00000265379 TRAV25A0A0B4J276 109 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms