RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 A0A1B0GW64 132 aa13.19□□□□□ -0.3
USP13-201ENST00000263966 G3V318 75 aa13.19□□□□□ -0.3
USP13-201ENST00000263966 MESP1Q9BRJ9 268 aa13.19□□□□□ -0.3
USP13-201ENST00000263966 HGFACQ04756 655 aa13.19□□□□□ -0.3
USP13-201ENST00000263966 WFDC9Q8NEX5 89 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 K7EMI3 77 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 Q8TCH9 128 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 FAM231BA6NCW3 169 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 HIST1H2BKO60814 126 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 HIST1H2BJP06899 126 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 HIST1H2BOP23527 126 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 HIST1H2BBP33778 126 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 HIST1H2BDP58876 126 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 HIST1H2BCP62807 126 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 HIST2H2BEQ16778 126 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.18□□□□□ -0.3
USP13-201ENST00000263966 HIST1H2BHQ93079 126 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 HIST1H2BNQ99877 126 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 HIST1H2BMQ99879 126 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 Q6P435 159 aa13.18□□□□□ -0.3
USP13-201ENST00000263966 CACNA1AO00555 2505 aa13.17□□□□□ -0.3
USP13-201ENST00000263966 FAM104BQ5XKR9 115 aa13.17□□□□□ -0.3
USP13-201ENST00000263966 VSIG2Q96IQ7 327 aa13.17□□□□□ -0.3
USP13-201ENST00000263966 NTF4P34130 210 aa13.17□□□□□ -0.3
USP13-201ENST00000263966 ZNF833PQ6ZTB9 187 aa13.17□□□□□ -0.3
USP13-201ENST00000263966 C15orf62A8K5M9 175 aa13.16□□□□□ -0.3
USP13-201ENST00000263966 LTAP01374 205 aa13.16□□□□□ -0.3
USP13-201ENST00000263966 TMEM14EPQ6UXP3 125 aa13.16□□□□□ -0.3
USP13-201ENST00000263966 WIPF2Q8TF74 440 aaPredicted RBP13.16□□□□□ -0.3
USP13-201ENST00000263966 IGHV4-4A0A075B6R2 117 aa13.16□□□□□ -0.3
USP13-201ENST00000263966 RNF138Q8WVD3 245 aa13.16□□□□□ -0.3
USP13-201ENST00000263966 PRO1854Q9UHT4 67 aa13.16□□□□□ -0.3
USP13-201ENST00000263966 LINC00473A8K010 186 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 NDUFA1O15239 70 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 IFITM1P13164 125 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 PRSS33Q8NF86 280 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 LYPD3O95274 346 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 KIR2DL5BA0A0G2JN68 375 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 KIR2DL5BA0A0G2JPC4 375 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 KIR2DL5AQ8N109 375 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 SIGLEC8Q9NYZ4 499 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 TINCRA0A1B0GVN0 87 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 HIGD2BQ4VC39 106 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 ATP6V0E2Q8NHE4 81 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 ZC2HC1AQ96GY0 325 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 HLA-DMBP28068 263 aa13.15□□□□□ -0.3
USP13-201ENST00000263966 Q5BKY6 102 aa13.15□□□□□ -0.31
USP13-201ENST00000263966 LINC01545Q5VT33 79 aa13.15□□□□□ -0.31
USP13-201ENST00000263966 LRRK2Q5S007 2527 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 IGHV4-28A0A0C4DH34 117 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 SHISA3A0PJX4 238 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 ZNF493Q6ZR52 646 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 VWCEQ96DN2 955 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 ETV2O00321 342 aaPredicted RBP13.14□□□□□ -0.31
USP13-201ENST00000263966 INSL3P51460 131 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 FAM120AOSQ5T036 256 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 TEX36Q5VZQ5 186 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 ADAMTSL5Q6ZMM2 481 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 RSPO3Q9BXY4 272 aaPredicted RBP13.14□□□□□ -0.31
USP13-201ENST00000263966 IGHV2-5P01817 119 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 C20orf78Q9BR46 151 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 H0Y9J4 135 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 K7EQD1 137 aa13.14□□□□□ -0.31
USP13-201ENST00000263966 TRBV24-1A0A075B6N3 115 aa13.13□□□□□ -0.31
USP13-201ENST00000263966 ANKRD29Q8N6D5 301 aa13.13□□□□□ -0.31
USP13-201ENST00000263966 NDUFA4L2Q9NRX3 87 aa13.13□□□□□ -0.31
USP13-201ENST00000263966 HHLA3Q9XRX5 114 aa13.13□□□□□ -0.31
USP13-201ENST00000263966 ZNF492Q9P255 531 aa13.13□□□□□ -0.31
USP13-201ENST00000263966 UBE2CO00762 179 aa13.13□□□□□ -0.31
USP13-201ENST00000263966 IGHV3-30P01768 117 aa13.13□□□□□ -0.31
USP13-201ENST00000263966 IGHV3-33P01772 117 aa13.13□□□□□ -0.31
USP13-201ENST00000263966 IGHV3-30-3P0DP02 117 aa13.13□□□□□ -0.31
USP13-201ENST00000263966 IGHV3-30-5P0DP03 117 aa13.13□□□□□ -0.31
USP13-201ENST00000263966 HOXB4P17483 251 aaPredicted RBP13.13□□□□□ -0.31
USP13-201ENST00000263966 GTSF1LQ9H1H1 148 aa13.13□□□□□ -0.31
USP13-201ENST00000263966 GFI1Q99684 422 aa13.12□□□□□ -0.31
USP13-201ENST00000263966 IGKV4-1P06312 121 aa13.12□□□□□ -0.31
USP13-201ENST00000263966 RNF222A6NCQ9 220 aa13.12□□□□□ -0.31
USP13-201ENST00000263966 NREPQ16612 68 aa13.12□□□□□ -0.31
USP13-201ENST00000263966 PPDPFLQ8WWR9 84 aa13.12□□□□□ -0.31
USP13-201ENST00000263966 ZFYVE26Q68DK2 2539 aa13.12□□□□□ -0.31
USP13-201ENST00000263966 Q0VG73 95 aa13.12□□□□□ -0.31
USP13-201ENST00000263966 IL15RAQ13261 267 aa13.12□□□□□ -0.31
USP13-201ENST00000263966 TMEM14CQ9P0S9 112 aa13.12□□□□□ -0.31
USP13-201ENST00000263966 C7orf33Q8WU49 177 aa13.12□□□□□ -0.31
USP13-201ENST00000263966 DEFB112Q30KQ8 113 aa13.11□□□□□ -0.31
USP13-201ENST00000263966 HIST1H2BLQ99880 126 aa13.11□□□□□ -0.31
USP13-201ENST00000263966 IGKV1-27A0A075B6S5 117 aa13.11□□□□□ -0.31
USP13-201ENST00000263966 IGFBPL1Q8WX77 278 aa13.11□□□□□ -0.31
USP13-201ENST00000263966 TRBV19A0A075B6N1 114 aa13.11□□□□□ -0.31
USP13-201ENST00000263966 NOTCH2Q04721 2471 aa13.11□□□□□ -0.31
USP13-201ENST00000263966 IGKV1-12A0A0C4DH73 117 aa13.11□□□□□ -0.31
USP13-201ENST00000263966 Q6ZS49 121 aa13.1□□□□□ -0.31
USP13-201ENST00000263966 IGHV4-59P01825 116 aa13.1□□□□□ -0.31
USP13-201ENST00000263966 F8VRH5 84 aa13.1□□□□□ -0.31
USP13-201ENST00000263966 CXCL5P42830 114 aa13.1□□□□□ -0.31
USP13-201ENST00000263966 OPRPNQ99935 248 aaPredicted RBP13.1□□□□□ -0.31
USP13-201ENST00000263966 GTSF1Q8WW33 167 aa13.1□□□□□ -0.31
USP13-201ENST00000263966 CARD19Q96LW7 228 aa13.1□□□□□ -0.31
USP13-201ENST00000263966 NCOR1P1Q9H4R4 102 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms