RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 H7C1H1 209 aa8.3□□□□□ -1.08
CHRNA1-201ENST00000261007 DSCR9P59020 149 aa8.3□□□□□ -1.08
CHRNA1-201ENST00000261007 CFAP126Q5VTH2 177 aa8.3□□□□□ -1.08
CHRNA1-201ENST00000261007 IL17RELQ6ZVW7 336 aa8.3□□□□□ -1.08
CHRNA1-201ENST00000261007 MOB4Q9Y3A3 225 aa8.3□□□□□ -1.08
CHRNA1-201ENST00000261007 TRAV26-1A0A087WT03 109 aa8.29□□□□□ -1.08
CHRNA1-201ENST00000261007 IGHV1-69DA0A0B4J2H0 117 aa8.29□□□□□ -1.08
CHRNA1-201ENST00000261007 RBAKDNA6NC62 111 aa8.29□□□□□ -1.08
CHRNA1-201ENST00000261007 F8VRH5 84 aa8.29□□□□□ -1.08
CHRNA1-201ENST00000261007 IGHV1-69P01742 117 aa8.29□□□□□ -1.08
CHRNA1-201ENST00000261007 CRYBA4P53673 196 aa8.29□□□□□ -1.08
CHRNA1-201ENST00000261007 ATP5G2Q06055 141 aa8.29□□□□□ -1.08
CHRNA1-201ENST00000261007 MORN3Q6PF18 240 aaPredicted RBP8.29□□□□□ -1.08
CHRNA1-201ENST00000261007 DLX4Q92988 240 aaPredicted RBP8.29□□□□□ -1.08
CHRNA1-201ENST00000261007 LAMA5O15230 3695 aa8.29□□□□□ -1.08
CHRNA1-201ENST00000261007 A6NJY4 79 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 OR11H12B2RN74 326 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 ATP6V0E1O15342 81 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 IGHG4P01861 327 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 PRB4P10163 310 aaPredicted RBP8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 INSL3P51460 131 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 CRIP2P52943 208 aaPredicted RBP8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 C5orf56Q8N8D9 126 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 NRACQ8N912 160 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 OR11H1Q8NG94 326 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 OR11H2Q8NH07 326 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 Q8TAT8 98 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 EEF1AKMT3Q96AZ1 226 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 CDIP1Q9H305 208 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 TRBV7-1A0A0A6YYK4 115 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 K7EMI3 77 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 CTSGP08311 255 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 GATA1P15976 413 aaPredicted RBP8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 LYRM7Q5U5X0 104 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 C20orf78Q9BR46 151 aa8.28□□□□□ -1.08
CHRNA1-201ENST00000261007 ATRXP46100 2492 aa8.27□□□□□ -1.09
CHRNA1-201ENST00000261007 IGHV4-4A0A075B6R2 117 aa8.27□□□□□ -1.09
CHRNA1-201ENST00000261007 SPINK8P0C7L1 97 aa8.27□□□□□ -1.09
CHRNA1-201ENST00000261007 SLC25A16P16260 332 aa8.27□□□□□ -1.09
CHRNA1-201ENST00000261007 ATP5J2P56134 94 aa8.27□□□□□ -1.09
CHRNA1-201ENST00000261007 ECSCRQ19T08 205 aa8.27□□□□□ -1.09
CHRNA1-201ENST00000261007 C15orf32Q32M92 178 aa8.27□□□□□ -1.09
CHRNA1-201ENST00000261007 SYT8Q8NBV8 401 aa8.27□□□□□ -1.09
CHRNA1-201ENST00000261007 SMAD5-AS1Q9Y6J3 95 aa8.27□□□□□ -1.09
CHRNA1-201ENST00000261007 ADGRG4Q8IZF6 3080 aa8.27□□□□□ -1.09
CHRNA1-201ENST00000261007 NBEAQ8NFP9 2946 aa8.27□□□□□ -1.09
CHRNA1-201ENST00000261007 GATA3P23771 443 aa8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 Q5PR19 223 aa8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 WFDC12Q8WWY7 111 aa8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 NBASA2RRP1 2371 aa8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 IGHV4-61A0A0C4DH41 118 aa8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 FAM223BA6NKX1 122 aa8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 BRI3O95415 125 aa8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 LGALS1P09382 135 aaKnown RBP8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 SMCPP49901 116 aaPredicted RBP8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 FAM223AQ8IWN6 122 aa8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 PPDPFLQ8WWR9 84 aa8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 PGPEP1Q9NXJ5 209 aa8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 S4R3C0 116 aa8.26□□□□□ -1.09
CHRNA1-201ENST00000261007 H3BUA1 57 aa8.25□□□□□ -1.09
CHRNA1-201ENST00000261007 TSPAN13O95857 204 aa8.25□□□□□ -1.09
CHRNA1-201ENST00000261007 UBE2D1P51668 147 aa8.25□□□□□ -1.09
CHRNA1-201ENST00000261007 ORMDL2Q53FV1 153 aa8.25□□□□□ -1.09
CHRNA1-201ENST00000261007 SPTBN1Q01082 2364 aaKnown RBP8.25□□□□□ -1.09
CHRNA1-201ENST00000261007 IGKV3D-20A0A0C4DH25 116 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 MSMBP08118 114 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 UBE2D3P61077 147 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 UBE2D2P62837 147 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 Q6ZUT4 128 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 TOMM6Q96B49 74 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 SLC50A1Q9BRV3 221 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 SPTBN4Q9H254 2564 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 TRAV41A0A0B4J266 112 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 IGHV3-23P01764 117 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 TMEM78Q5T7P6 136 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 NFE4Q86UQ8 179 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 SBSPONQ8IVN8 264 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 NEXN-AS1Q8NBZ9 246 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 SMIM2Q9BVW6 85 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 ZFAND3Q9H8U3 227 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 ERG28Q9UKR5 140 aa8.24□□□□□ -1.09
CHRNA1-201ENST00000261007 TRBV20-1A0A075B6N2 111 aa8.23□□□□□ -1.09
CHRNA1-201ENST00000261007 IGHV7-4-1A0A0J9YVY3 117 aa8.23□□□□□ -1.09
CHRNA1-201ENST00000261007 B4DSR2 109 aa8.23□□□□□ -1.09
CHRNA1-201ENST00000261007 TRGV3P03979 118 aa8.23□□□□□ -1.09
CHRNA1-201ENST00000261007 CLEC3BP05452 202 aa8.23□□□□□ -1.09
CHRNA1-201ENST00000261007 HLA-DMBP28068 263 aa8.23□□□□□ -1.09
CHRNA1-201ENST00000261007 ERCC8Q13216 396 aa8.23□□□□□ -1.09
CHRNA1-201ENST00000261007 C19orf54Q5BKX5 351 aa8.23□□□□□ -1.09
CHRNA1-201ENST00000261007 TEN1Q86WV5 123 aa8.23□□□□□ -1.09
CHRNA1-201ENST00000261007 SCGB3A1Q96QR1 104 aa8.23□□□□□ -1.09
CHRNA1-201ENST00000261007 HIF1ANQ9NWT6 349 aa8.23□□□□□ -1.09
CHRNA1-201ENST00000261007 LINC01549A6NIU2 74 aa8.22□□□□□ -1.09
CHRNA1-201ENST00000261007 IGF1P05019 195 aa8.22□□□□□ -1.09
CHRNA1-201ENST00000261007 PPIFP30405 207 aaKnown RBP8.22□□□□□ -1.09
CHRNA1-201ENST00000261007 MRPL53Q96EL3 112 aaKnown RBP8.22□□□□□ -1.09
CHRNA1-201ENST00000261007 METTL26Q96S19 204 aa8.22□□□□□ -1.09
CHRNA1-201ENST00000261007 TMEM262E9PQX1 116 aa8.22□□□□□ -1.09
CHRNA1-201ENST00000261007 BUB3O43684 328 aa8.22□□□□□ -1.09
CHRNA1-201ENST00000261007 MT-ATP8P03928 68 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms