RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 HIST1H2BCP62807 126 aa13.89□□□□□ -0.19
TNFSF9-201ENST00000245817 HIST2H2BEQ16778 126 aa13.89□□□□□ -0.19
TNFSF9-201ENST00000245817 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.89□□□□□ -0.19
TNFSF9-201ENST00000245817 HIST1H2BHQ93079 126 aa13.89□□□□□ -0.19
TNFSF9-201ENST00000245817 MDFIQ99750 246 aa13.89□□□□□ -0.19
TNFSF9-201ENST00000245817 HIST1H2BNQ99877 126 aa13.89□□□□□ -0.19
TNFSF9-201ENST00000245817 HIST1H2BMQ99879 126 aa13.89□□□□□ -0.19
TNFSF9-201ENST00000245817 A0A1B0GXF2 115 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 M0R2Z0 102 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 PHOX2AO14813 284 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 APCSP02743 223 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 ARMS2P0C7Q2 107 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 KIR3DS1Q14943 382 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 SPINK13Q1W4C9 94 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 KRTAP21-3Q3LHN1 58 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 C9orf66Q5T8R8 295 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 TRAV12-3A0A0B4J271 114 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 IGLC6P0CF74 106 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 ZNF124Q15973 351 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 ODF3L2Q3SX64 289 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 FAM159AQ6UWV7 190 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 Q6ZQT7 251 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 STHQ8IWL8 128 aa13.88□□□□□ -0.19
TNFSF9-201ENST00000245817 S100A4P26447 101 aaKnown RBP13.87□□□□□ -0.19
TNFSF9-201ENST00000245817 NDUFA6P56556 154 aa13.87□□□□□ -0.19
TNFSF9-201ENST00000245817 SSTP61278 116 aa13.87□□□□□ -0.19
TNFSF9-201ENST00000245817 ANXA2RQ3ZCQ2 193 aa13.87□□□□□ -0.19
TNFSF9-201ENST00000245817 MUC21Q5SSG8 566 aa13.87□□□□□ -0.19
TNFSF9-201ENST00000245817 C3orf56Q8N813 242 aa13.87□□□□□ -0.19
TNFSF9-201ENST00000245817 KCNS1Q96KK3 526 aa13.87□□□□□ -0.19
TNFSF9-201ENST00000245817 TRAV12-2A0A075B6T6 113 aa13.86□□□□□ -0.19
TNFSF9-201ENST00000245817 CTRLP40313 264 aa13.86□□□□□ -0.19
TNFSF9-201ENST00000245817 GFI1BQ5VTD9 330 aa13.86□□□□□ -0.19
TNFSF9-201ENST00000245817 AMTNQ6UX39 209 aa13.86□□□□□ -0.19
TNFSF9-201ENST00000245817 MCRIP2Q9BUT9 160 aaKnown RBP13.86□□□□□ -0.19
TNFSF9-201ENST00000245817 A8MTW9 85 aa13.85□□□□□ -0.19
TNFSF9-201ENST00000245817 ASIPP42127 132 aa13.85□□□□□ -0.19
TNFSF9-201ENST00000245817 FAM110AQ9BQ89 295 aa13.85□□□□□ -0.19
TNFSF9-201ENST00000245817 ZNF747Q9BV97 191 aa13.85□□□□□ -0.19
TNFSF9-201ENST00000245817 FXYD7P58549 80 aa13.85□□□□□ -0.19
TNFSF9-201ENST00000245817 SNRPEP62304 92 aaKnown RBP13.85□□□□□ -0.19
TNFSF9-201ENST00000245817 TWIST1Q15672 202 aa13.85□□□□□ -0.19
TNFSF9-201ENST00000245817 BEAN1Q3B7T3 259 aa13.85□□□□□ -0.19
TNFSF9-201ENST00000245817 ZNF575Q86XF7 245 aa13.85□□□□□ -0.19
TNFSF9-201ENST00000245817 SSBP4Q9BWG4 385 aaPredicted RBP13.85□□□□□ -0.19
TNFSF9-201ENST00000245817 TENM1Q9UKZ4 2725 aa13.84□□□□□ -0.19
TNFSF9-201ENST00000245817 MUC21A0A0G2JKD1 596 aa13.84□□□□□ -0.19
TNFSF9-201ENST00000245817 MUC21A0A140T8X8 626 aa13.84□□□□□ -0.19
TNFSF9-201ENST00000245817 ZNF324O75467 553 aaPredicted RBP13.84□□□□□ -0.19
TNFSF9-201ENST00000245817 CLUHP3Q96NS8 147 aa13.84□□□□□ -0.19
TNFSF9-201ENST00000245817 NTF3P20783 257 aa13.83□□□□□ -0.2
TNFSF9-201ENST00000245817 NUTF2P61970 127 aaKnown RBP13.83□□□□□ -0.2
TNFSF9-201ENST00000245817 TIMM8BQ9Y5J9 83 aaPredicted RBP13.83□□□□□ -0.2
TNFSF9-201ENST00000245817 STAB1Q9NY15 2570 aa13.83□□□□□ -0.2
TNFSF9-201ENST00000245817 CD7P09564 240 aa13.82□□□□□ -0.2
TNFSF9-201ENST00000245817 OR5AL1P0C617 328 aa13.82□□□□□ -0.2
TNFSF9-201ENST00000245817 SLAQ13239 276 aa13.82□□□□□ -0.2
TNFSF9-201ENST00000245817 KIAA1644Q3SXP7 199 aa13.82□□□□□ -0.2
TNFSF9-201ENST00000245817 LOC105371267A0A1B0GV96 52 aa13.82□□□□□ -0.2
TNFSF9-201ENST00000245817 H3BVH4 76 aa13.82□□□□□ -0.2
TNFSF9-201ENST00000245817 CACNG7P62955 275 aa13.82□□□□□ -0.2
TNFSF9-201ENST00000245817 SPANXN1Q5VSR9 72 aa13.82□□□□□ -0.2
TNFSF9-201ENST00000245817 SORL1Q92673 2214 aa13.81□□□□□ -0.2
TNFSF9-201ENST00000245817 C5orf52A6NGY3 159 aa13.81□□□□□ -0.2
TNFSF9-201ENST00000245817 GNRH2O43555 120 aa13.81□□□□□ -0.2
TNFSF9-201ENST00000245817 AMBPP02760 352 aa13.81□□□□□ -0.2
TNFSF9-201ENST00000245817 SHISA2Q6UWI4 295 aa13.81□□□□□ -0.2
TNFSF9-201ENST00000245817 GTSCR1Q86UQ5 136 aa13.81□□□□□ -0.2
TNFSF9-201ENST00000245817 CNFNQ9BYD5 112 aa13.81□□□□□ -0.2
TNFSF9-201ENST00000245817 IGHV1OR15-1A0A075B7D0 117 aa13.8□□□□□ -0.2
TNFSF9-201ENST00000245817 RBMY1BA6NDE4 496 aaKnown RBP13.8□□□□□ -0.2
TNFSF9-201ENST00000245817 RBMY1EA6NEQ0 496 aaKnown RBP13.8□□□□□ -0.2
TNFSF9-201ENST00000245817 SNAI2O43623 268 aa13.8□□□□□ -0.2
TNFSF9-201ENST00000245817 RBMY1DP0C7P1 496 aaKnown RBP13.8□□□□□ -0.2
TNFSF9-201ENST00000245817 MED14OSP0DP75 135 aa13.8□□□□□ -0.2
TNFSF9-201ENST00000245817 SMIM15Q7Z3B0 74 aa13.8□□□□□ -0.2
TNFSF9-201ENST00000245817 PHLDA3Q9Y5J5 127 aa13.8□□□□□ -0.2
TNFSF9-201ENST00000245817 TDRG1Q3Y452 100 aa13.79□□□□□ -0.2
TNFSF9-201ENST00000245817 DNLZQ5SXM8 178 aa13.79□□□□□ -0.2
TNFSF9-201ENST00000245817 ZNF493Q6ZR52 646 aa13.79□□□□□ -0.2
TNFSF9-201ENST00000245817 TRPT1Q86TN4 253 aaKnown RBP13.79□□□□□ -0.2
TNFSF9-201ENST00000245817 GATD1Q8NB37 220 aa13.79□□□□□ -0.2
TNFSF9-201ENST00000245817 SRIP30626 198 aa13.79□□□□□ -0.2
TNFSF9-201ENST00000245817 WFDC9Q8NEX5 89 aa13.79□□□□□ -0.2
TNFSF9-201ENST00000245817 CRXO43186 299 aaPredicted RBP13.78□□□□□ -0.2
TNFSF9-201ENST00000245817 INSP01308 110 aa13.78□□□□□ -0.2
TNFSF9-201ENST00000245817 OR10AG1Q8NH19 301 aa13.78□□□□□ -0.2
TNFSF9-201ENST00000245817 C20orf144Q9BQM9 153 aa13.77□□□□□ -0.21
TNFSF9-201ENST00000245817 AGRNO00468 2067 aa13.77□□□□□ -0.21
TNFSF9-201ENST00000245817 ANK2Q01484 3957 aa13.77□□□□□ -0.21
TNFSF9-201ENST00000245817 TRGV11A0A075B6L2 103 aa13.76□□□□□ -0.21
TNFSF9-201ENST00000245817 LOC102724200A0A096LPH7 203 aaPredicted RBP13.76□□□□□ -0.21
TNFSF9-201ENST00000245817 CBY3A6NI87 242 aa13.76□□□□□ -0.21
TNFSF9-201ENST00000245817 HOXA5P20719 270 aa13.76□□□□□ -0.21
TNFSF9-201ENST00000245817 PRR31Q5SQ13 230 aa13.76□□□□□ -0.21
TNFSF9-201ENST00000245817 BAGE3Q86Y29 109 aa13.76□□□□□ -0.21
TNFSF9-201ENST00000245817 SPATA3Q8NHX4 192 aa13.76□□□□□ -0.21
TNFSF9-201ENST00000245817 TMEM191AQ9H0A3 160 aa13.76□□□□□ -0.21
TNFSF9-201ENST00000245817 C19orf73Q9NVV2 129 aa13.76□□□□□ -0.21
TNFSF9-201ENST00000245817 MSRB1Q9NZV6 116 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 231.8 ms