RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SMIM12Q96EX1 92 aa8.25□□□□□ -1.09
TNFAIP3-201ENST00000237289 MGAM2Q2M2H8 2515 aa8.24□□□□□ -1.09
TNFAIP3-201ENST00000237289 FRMD6-AS1P0C7T7 363 aa8.24□□□□□ -1.09
TNFAIP3-201ENST00000237289 BTF3L4Q96K17 158 aa8.24□□□□□ -1.09
TNFAIP3-201ENST00000237289 SPRY2O43597 315 aa8.24□□□□□ -1.09
TNFAIP3-201ENST00000237289 SMIM6P0DI80 62 aa8.24□□□□□ -1.09
TNFAIP3-201ENST00000237289 ODF3Q96PU9 254 aa8.24□□□□□ -1.09
TNFAIP3-201ENST00000237289 SPATA25Q9BR10 227 aa8.24□□□□□ -1.09
TNFAIP3-201ENST00000237289 TRPT1Q86TN4 253 aaKnown RBP8.24□□□□□ -1.09
TNFAIP3-201ENST00000237289 SFRP2Q96HF1 295 aa8.24□□□□□ -1.09
TNFAIP3-201ENST00000237289 TRBV7-9A0A0J9YWB2 115 aa8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 GFI1BQ5VTD9 330 aa8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 RNASE7Q9H1E1 156 aaKnown RBP8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 RPP21Q9H633 154 aaKnown RBP8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 SPINK4O60575 86 aa8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 LTAP01374 205 aa8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 HTN3P15516 51 aa8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 RPL23P62829 140 aaKnown RBP8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 C20orf144Q9BQM9 153 aa8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 LY96Q9Y6Y9 160 aa8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 M0R381 172 aa8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 NDUFS6O75380 124 aaKnown RBP8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 RIGQ13278 110 aa8.23□□□□□ -1.09
TNFAIP3-201ENST00000237289 A0A1W2PPQ1 181 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 TRGV1A0A0A0MS02 117 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 ANXA2RQ3ZCQ2 193 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 ZC2HC1AQ96GY0 325 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 VPS25Q9BRG1 176 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 KLF12Q9Y4X4 402 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 ZNF25P17030 456 aaPredicted RBP8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 KRTAP10-11P60412 298 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 TWIST1Q15672 202 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 FER1L6-AS1Q8NA97 138 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 NUDT10Q8NFP7 164 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 NUDT11Q96G61 164 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 CTDSP1Q9GZU7 261 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 GSN-AS1Q9NRJ2 163 aa8.22□□□□□ -1.09
TNFAIP3-201ENST00000237289 C7orf77A4D0Y5 90 aa8.21□□□□□ -1.09
TNFAIP3-201ENST00000237289 LINC01551Q86U37 167 aa8.21□□□□□ -1.09
TNFAIP3-201ENST00000237289 AKAP9Q99996 3911 aa8.21□□□□□ -1.09
TNFAIP3-201ENST00000237289 H3BVH4 76 aa8.21□□□□□ -1.09
TNFAIP3-201ENST00000237289 ZNF493Q6ZR52 646 aa8.21□□□□□ -1.09
TNFAIP3-201ENST00000237289 AP1S3Q96PC3 154 aa8.21□□□□□ -1.09
TNFAIP3-201ENST00000237289 VPS13CQ709C8 3753 aa8.21□□□□□ -1.1
TNFAIP3-201ENST00000237289 DEFB130BP0DP73 79 aa8.21□□□□□ -1.1
TNFAIP3-201ENST00000237289 DEFB130AP0DP74 79 aa8.21□□□□□ -1.1
TNFAIP3-201ENST00000237289 PGLYRP4Q96LB8 373 aa8.21□□□□□ -1.1
TNFAIP3-201ENST00000237289 OSTCQ9NRP0 149 aa8.21□□□□□ -1.1
TNFAIP3-201ENST00000237289 CXorf65A6NEN9 183 aa8.21□□□□□ -1.1
TNFAIP3-201ENST00000237289 EGFEM1PQ0D2K5 195 aa8.21□□□□□ -1.1
TNFAIP3-201ENST00000237289 ZFHX3Q15911 3703 aa8.2□□□□□ -1.1
TNFAIP3-201ENST00000237289 CAMPP49913 170 aa8.2□□□□□ -1.1
TNFAIP3-201ENST00000237289 PCP4P48539 62 aa8.2□□□□□ -1.1
TNFAIP3-201ENST00000237289 FAM74A4Q5TZK3 123 aa8.2□□□□□ -1.1
TNFAIP3-201ENST00000237289 C9JQL5 133 aa8.2□□□□□ -1.1
TNFAIP3-201ENST00000237289 MGPP08493 103 aa8.2□□□□□ -1.1
TNFAIP3-201ENST00000237289 TRGC1P0CF51 173 aa8.2□□□□□ -1.1
TNFAIP3-201ENST00000237289 DAD1P61803 113 aa8.2□□□□□ -1.1
TNFAIP3-201ENST00000237289 MUC21A0A0G2JKD1 596 aa8.19□□□□□ -1.1
TNFAIP3-201ENST00000237289 MUC21A0A140T8X8 626 aa8.19□□□□□ -1.1
TNFAIP3-201ENST00000237289 RAB5AP20339 215 aa8.19□□□□□ -1.1
TNFAIP3-201ENST00000237289 C16orf74Q96GX8 76 aa8.19□□□□□ -1.1
TNFAIP3-201ENST00000237289 NAT8BQ9UHF3 227 aa8.19□□□□□ -1.1
TNFAIP3-201ENST00000237289 SVEP1Q4LDE5 3571 aa8.19□□□□□ -1.1
TNFAIP3-201ENST00000237289 TRBV6-1A0A0K0K1D8 114 aa8.19□□□□□ -1.1
TNFAIP3-201ENST00000237289 Q6AWC8 147 aa8.19□□□□□ -1.1
TNFAIP3-201ENST00000237289 Q6ZWC4 215 aa8.19□□□□□ -1.1
TNFAIP3-201ENST00000237289 CRISP2P16562 243 aa8.19□□□□□ -1.1
TNFAIP3-201ENST00000237289 SMIM9A6NGZ8 99 aa8.19□□□□□ -1.1
TNFAIP3-201ENST00000237289 F2Z2F3 143 aa8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 WIPF1O43516 503 aa8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 ARMS2P0C7Q2 107 aa8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 MRPL54Q6P161 138 aaKnown RBP8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 ZNF469Q96JG9 3925 aaPredicted RBP8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 SPXQ9BT56 116 aa8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 NOP10Q9NPE3 64 aaKnown RBP8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 DEFB4AO15263 64 aa8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 GNRH2O43555 120 aa8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 SPART-AS1P0CW21 52 aa8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 GZMBP10144 247 aa8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 Q8N1Y9 231 aa8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 ZFAND2AQ8N6M9 145 aa8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 ANK3Q12955 4377 aaKnown RBP8.18□□□□□ -1.1
TNFAIP3-201ENST00000237289 TRGV4A0A0C4DH28 118 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 OR4C5Q8NGB2 326 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 TEX48A0A1B0GUV7 120 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 KIR3DS1Q14943 382 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 ZNF876PQ49A33 203 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 BAGE3Q86Y29 109 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 GAGE12BA1L429 117 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 GAGE7O76087 117 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 GAGE12FP0CL80 117 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 GAGE12GP0CL81 117 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 GAGE12IP0CL82 117 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 MIFP14174 115 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 CACNG7P62955 275 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 HIGD1CA8MV81 97 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms